Array 1 274942-269394 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXZ01000001.1 Acinetobacter soli strain TUM15551 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 274941 28 100.0 32 ............................ ATGTGCATGCGACTGGCATTTCAAATTCTGTT 274881 28 100.0 32 ............................ TACAAAAACCATTAATTCATCAAGTGATTGTT 274821 28 100.0 32 ............................ TCTTCGCGCAGAACTCGTCAACTCGTCTGATG 274761 28 100.0 32 ............................ TTGATACAAACAATATAAGCGAAATTAAGGAG 274701 28 100.0 32 ............................ AACCGCCGATTGTGCCAGCATGGGCAACAGTA 274641 28 100.0 32 ............................ GATTTATAAAAACACAAAAGAAAAAAACGAGA 274581 28 100.0 32 ............................ GAACTGGAGGGATCATATTGAAGTCAGTCTTT 274521 28 100.0 32 ............................ TTTCGCCTCTAAAACTCAAATACAGAGCGACC 274461 28 100.0 32 ............................ AGACATAAAAAAAGCACTCTTTCGAGTGCTTT 274401 28 100.0 32 ............................ AGCCATTTGCAGTAGAACTACAGGGAGTTGAT 274341 28 100.0 32 ............................ AATCAAAGTCGATCCTGAGCATCATCACATGC 274281 28 100.0 32 ............................ ATTTGTGAGAAATACTGTGATCTTCCGAAACG 274221 28 100.0 32 ............................ ACTGTGCAGCGATGAATTTGAAGATTGAATCC 274161 28 100.0 32 ............................ ATTCTCTGGGGGTCATCATGTCAAATTTAATT 274101 28 100.0 32 ............................ TCTAAACCACGGTCAAACTTCTGTGATTTAAA 274041 28 100.0 32 ............................ ATCAGTAATAAGTTTATCAATTGGTGTTTTTG 273981 28 100.0 32 ............................ TTAGCGATAGGTAAAGCATACGAAAATGGTCG 273921 28 100.0 32 ............................ AATCTGGATTTAGTGGCTCCAAGTACTTCTGG 273861 28 100.0 32 ............................ TGAGCAAATGCTCCGCTATCGAGCTGCTTCAT 273801 28 100.0 32 ............................ AATCCGTGGCCACACCTCCGACAAATCCCCCC 273741 28 100.0 32 ............................ TTTTTCAGAGTATCGCGCAAAAGCACAAAAGC 273681 28 100.0 32 ............................ CGAACGGTTTGCAATTTGACGTGAAAACCACA 273621 28 100.0 32 ............................ TCCTTGCTCTTGCCCACTACGCACTACATTTC 273561 28 100.0 32 ............................ CCGCCAGTATCCAAAGCACCACCACCAATTAA 273501 28 100.0 32 ............................ AGCAAATCATGATTCAGCGATTAGAGGCCCAA 273441 28 100.0 32 ............................ TCACAACGTGGGCTAACATCGACCATGTCTAA 273381 28 100.0 32 ............................ AAACAGCAGAAATCTTACTACGAAAAAGCCGG 273321 28 100.0 32 ............................ AAACGGTGAAGTACACGGACTGTGGATTGAAT 273261 28 100.0 32 ............................ TGCCACTGGTGGGGCTTTTTTTATGTGTGGGG 273201 28 100.0 32 ............................ ATCAAGGGCGAAGATGATCAGACATTAAAGTT 273141 28 100.0 32 ............................ TTGATTGGCATTAAGTTTTTATTAATCAGTTG 273081 28 100.0 32 ............................ ACCAGCAATGGACTGGACAAAATACACAATTG 273021 28 100.0 32 ............................ GCAATCGTTGGCTTTTGCTTGTCTTCGATATG 272961 28 100.0 32 ............................ TTGCTCTGTGTTCACGCTCATAAAGCGGCAGA 272901 28 100.0 32 ............................ CTCAGCTTTTTCAATCAAACGTGTGTTTGCTC 272841 28 100.0 32 ............................ CATTGTTCCGGTATACGGTGAGGTGATTTGGA 272781 28 100.0 32 ............................ TAGAAATGCGCCGGCAGCCGAAACGCCAATCG 272721 28 100.0 32 ............................ TGAAGGCTATGCTAAAGTCATGACCATGTATC 272661 28 100.0 32 ............................ AGCAACAATTGGTTTTAAAAAATCAAGCCCAT 272601 28 100.0 32 ............................ TGACTACAACCGAAAGGCCAAGCTATATGCAC 272541 28 100.0 32 ............................ ATCATAAGATGTTGCGATATACGGCATTGGAC 272481 28 100.0 32 ............................ GCTTGCTTCAACGGTGGGAGAAGCTGGACAAG 272421 28 100.0 32 ............................ GTCCGTAATTTTGCTACATGGTCTTTACGTGT 272361 28 100.0 32 ............................ TGATTGGGGTTTGCGGAAAGTATTCAGGTTAA 272301 28 100.0 32 ............................ CGCTTCAAAATCTAATGCGATAAGAACAGCAC 272241 28 100.0 32 ............................ ACCAGTGGATCTGGCTATTAGCCAGTGCAGCT 272181 28 100.0 32 ............................ TATTGATCTATCACCGGTCTGGCTCTGTGAAA 272121 28 100.0 32 ............................ AAATTGTTCCTGACAGTTTTTGACTTTCTCAG 272061 28 100.0 32 ............................ TCTACACGGACACCAGTTTGATTAATCCAGTA 272001 28 100.0 32 ............................ ATCATTTAATGCCCATGCAAATACCATGATTT 271941 28 100.0 32 ............................ AATCTTCAACATGCACAGGTCCATCATTTAAT 271881 28 100.0 32 ............................ CTAATATGGATGTGTTTTTTAATCAGCAAGCA 271821 28 100.0 32 ............................ ATCCCCTTGCCCCAAATGGCCAAGGATCTGAT 271761 28 100.0 32 ............................ GAGAACGCTGGGATGACTCAAGCGAGCTCAAT 271701 28 100.0 32 ............................ TGACTTTTTAGCAACTGCAACCAGTTCTATGT 271641 28 100.0 32 ............................ CGCAGGGCGCGAACAGAGGATTTTTTCATATG 271581 28 100.0 32 ............................ AGACGAGTTCCAATTACAGCACTTAATGCAAT 271521 28 100.0 32 ............................ GACACCGAGCTTTTTCTTCCCAAATTTCTCGT 271461 28 100.0 32 ............................ GAGAATTTTGTTTTGATGCAGTTCAGGCTGTT 271401 28 100.0 32 ............................ TGCCAGAATTTTAGAATTTAATCTAAAACTGC 271341 28 100.0 32 ............................ TTGTGTGACTTCTTTCCTGAGGCTTCAAGATG 271281 28 100.0 32 ............................ TGTATCAACAACTGATTATTACTATTGTGTAA 271221 28 100.0 32 ............................ CAGTGCTGCAAATCACTCATCAATGAAGTTTG 271161 28 100.0 32 ............................ ATTATGCCATACCTGTCACCAGTGGTTCGATC 271101 28 100.0 32 ............................ TAAATCTTTCGATTCCTGACTTCTGGCCACCG 271041 28 100.0 32 ............................ GTCCAAACGACGACAGCTTAATGGCTCAAATA 270981 28 100.0 32 ............................ AAGAACAATAGAAATAAGATAAGTTAAAAATG 270921 28 100.0 32 ............................ TTTACCCCCAAATTGTGACTGGAGAACTACAC 270861 28 100.0 32 ............................ TTACACATCACTCAATACAGCTTGGTCTTCAA 270801 28 100.0 32 ............................ AAAAACTATGTGAGCTGCGATATTCGGGTTGT 270741 28 100.0 32 ............................ AACCACTTCAGTTGATGCAACTTTCATGATGT 270681 28 100.0 32 ............................ TGTAACTCCTTACCCGAATAAACTAGCTTATA 270621 28 100.0 32 ............................ AAAAACGTTTAGCAAATACTGTGAGTTTGATT 270561 28 100.0 32 ............................ ATCCAAATTTTTTGTGGATATGAATAGTAAAA 270501 28 100.0 32 ............................ TATCTCGGGCAACATCATGGAGCGGCGGCAGG 270441 28 100.0 32 ............................ TCATACCTACGCATATGCCGTTTGGTAAATAT 270381 28 100.0 32 ............................ AAACACTTTTGAATGGCTAGGCGTGTACGATG 270321 28 100.0 32 ............................ TGTACTTTTTACCTTTACAAGCTGATCACCAC 270261 28 100.0 32 ............................ ATCAACAATACTTGATGCAAGAATGTGTTGAT 270201 28 100.0 32 ............................ TGACTATCACATTGTGCCATGTGAAACATTTA 270141 28 100.0 32 ............................ TAAAGCCAAATGTCCTTTATTCGAAAAGACAG 270081 28 100.0 32 ............................ TACGGCAGCGAGATTATGTTTGTTGCCGAAAC 270021 28 100.0 32 ............................ AGACTCGTCGCTGCCATCGATGGTCAGATCAC 269961 28 100.0 33 ............................ AATGTCGCGCTTTACACTCATTGTATTTCGCAA 269900 28 96.4 32 ...T........................ ATCCATTCAGTTGTAGTAAATCCCCCCAAAAC 269840 28 96.4 32 ...T........................ AGAAGACACACAAGAAACACAGGTTCAATTTC 269780 28 96.4 31 ...T........................ ACTTGCTGAGCAAAAGATTAAAGCTGCAACA 269721 28 89.3 32 TG.T........................ CAGTTCACGTTATTTTCAGACATACCATTGTC 269661 28 96.4 32 ...T........................ TTCAGCAGAAAAAGCTGTAGCAGTTGTTAAAG 269601 28 100.0 32 ............................ TGAAAGTGCCGTAGTTTTTGATGTTAAAAGTG 269541 28 100.0 32 ............................ ATAAAACCAACTGTACTTGCTGCTCCCACAGC 269481 28 100.0 32 ............................ GAAGCGAAAACGATCGAAGTCGGGTGCTATTC 269421 28 96.4 0 ............T............... | ========== ====== ====== ====== ============================ ================================= ================== 93 28 99.7 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACACGATACTCTTACCGATATCGCGAATAACTATTTAGATCACGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGCATGGGAATTAGTTTTGCATTACCTATCTTACATGGCAAAACACGCCGCGGAGGTTTAGTATTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACAGACATATGTAGTAAAATCAAATAAAATCATACAATTAAGTCAAGTGGTTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATTAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : AGCTAAAAATACTTCTCCTCACATCGTATTTTCCTGTACCAAACTATTCATATAAGCCACGGCCGCCGTGCGGTTTTCCACACAGAGTTTTTCAAAAATATGCTCAAGATGTTTATTTACAGTTCTTGGGCTGAGCTCTAATATCTCGGCAATATCTTTATTGGTTTTACCCAGTGCCAGCCAATGCGAAACTTCCGCCTCTCGCTGGGTCAGTTGCGGGCAATATTTTAAAATCTCCTCAACGCCCAAAGCCGGAGCAGACATTTTAATTTGTACCAGATAAGTGGCGTGACCCACAGGTTGATCGTGCCATGGCGTAAGTAAAATAAGTTGCAGTTGATGCGATGCACTAGAATAGGTGCAACTCATTTTCTTTTTATTGTCTTTATCGCGTTTAATTTCGGCAAACCACTGCGTTAAACCAGTTTCAAAGCGTTCACGATCTTGCAAATATTGGTTCAGGAAAATATTGGCTTTTTCTGTGGTCCATGCAATTTTCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 349019-348511 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKXZ01000001.1 Acinetobacter soli strain TUM15551 sequence01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 349018 28 92.9 32 ...........T.A.............. TTGAAGAAATCAAGGCAAATTACGGCAAGACT 348958 28 100.0 32 ............................ AGTGTTCCATCTTTGTTTTTTTAAATCGTTCA 348898 28 100.0 32 ............................ ATTGGTTCTTATCAGGTGGCTCAGCGTAATGT 348838 28 100.0 32 ............................ GCTTTCGATATCGTAAACTGCAAAGTAAGCCA 348778 28 100.0 32 ............................ TGATCTTCGGTCGGCACACGATTGAACTTTTT 348718 28 100.0 32 ............................ ATTGGTCAAATACAGTCCATTGGTGGCCACAA 348658 28 100.0 32 ............................ TTTAAGGGCAATTGTATGTTCGCTGCTAGATC 348598 28 100.0 32 ............................ ATTTTCTAATTTTAAACTTCAATAAAATGATC 348538 28 89.3 0 .......G.....T..........A... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 98.0 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCGATATCGGCAGGTGTAAATGCGATTTGACGTTGCAAATTACTGGTTTCAATGGTGTCGGCATCAATCAGCGTGATTTTACCTACGCCTGCTCGAGCCAGTAGCTCTGCTGTTGTACAACCGATTCCACCCGCGCCTACTATCAAAACATTGGCGAACTTTAGTTTTTCTTGAGCATCTAAATCCCATCCATCGAGTAAAATTTGTCTGCTATATAAATGCATTTCGGCATCATTTAGCTCTAAATCCAGATTGTCCTGATTGTTCACTCGTGATTATCCCAATTTATCAATACCAAATTCATCGCCATGATTATAAAGACAAGCTTGTGTTGTGAGATGTTTTATTTTGACAAAAGTGAACTTTTACGCCAATATTTCACTTACTCTTTAACAGTTAAATAAAATCAAAGACTTAGTTAGAGCTAAAATAAAATAGGTATTTTTATTTTATTTACTTTAGTATATTGTTTTTAATATATATTTTTATATTTTATTACT # Right flank : GTTTGACGACTCAAAATCATCAATATTCAGGTAGGTATTTGATTAAAAATGCATATACTTAAATCAACAACAATAGTTTAGATTTTGGCACTTTTTTCTTATGCTCAAACAGCCCTTCCTCAAAAAGATAATTCAATATGCGCCAGTCATTTTATTTTGCATAGCATTATTTATCATACATAAAGAACTAGAGACCCATGAGTTTTCAGGCTTACTTAAACACTGGAACAATATTCCTTGGTCAATCGCGCTAATGGCATGTGGTTTGACATTAGCCAGCTATTTATTCCTTACACTTTATGATGTTTTGGCTTTAAGGTCATTAGGATATCGCAACACCAAGTATAGATATATTCTATTCACTTCGTTTGTCAGCTTTTCTATCAGTAACAACACTGGACATGCATGGGCCTCTGGGGGTTCAATCCGCTATCGTTTTTATCAAAAAATGGGCGTTCAGGGCTGGGATATTGCAAAAATCTCGGCTTTTTTAAGTCTGA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-93.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //