Array 1 4888043-4890692 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP023925.1 Klebsiella pneumoniae strain FDAARGOS_442 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4888043 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 4888104 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 4888165 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 4888226 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 4888288 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 4888349 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 4888410 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 4888471 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 4888532 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 4888593 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 4888654 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 4888715 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 4888776 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 4888837 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 4888898 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 4888959 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 4889020 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 4889081 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 4889142 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 4889203 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 4889264 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 4889325 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 4889386 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 4889447 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 4889508 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4889569 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 4889630 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4889691 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4889752 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4889813 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4889874 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 4889935 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4889996 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4890057 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4890118 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4890179 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4890240 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4890301 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4890362 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4890423 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4890484 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4890545 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4890606 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 4890664 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //