Array 1 3172-3931 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJHHA010000370.1 Klebsiella pneumoniae strain 12KE NODE_1381_length_3917_cov_127.892517, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      3172	    29	 100.0	    32	.............................	GGAATGTCCTTGATTATATAAAGGCTGTCAGT	
      3233	    29	 100.0	    32	.............................	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
      3294	    29	 100.0	    32	.............................	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
      3355	    29	  93.1	    32	............CA...............	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
      3416	    29	  93.1	    32	............CA...............	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
      3477	    29	  89.7	    32	............CA..............C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
      3538	    29	 100.0	    32	.............................	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
      3599	    29	  93.1	    32	............CA...............	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
      3660	    29	 100.0	    32	.............................	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
      3721	    29	  93.1	    32	............CA...............	CAGCGTCTGAACGGACGAAACATCCCTGTTGA	
      3782	    28	  93.1	    32	..........-..C...............	TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA	
      3842	    29	  93.1	    32	............CA...............	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
      3903	    29	  96.6	     0	..............A..............	|                               	
==========	======	======	======	=============================	================================	==================
        13	    29	  95.8	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  TTCCGGACTCCTGTTTCCGGCAGTGGATTAAAGT

# Questionable array : NO	 Score: 5.67
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.62,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGCATGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-13] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [70.0-28.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.18,0.74   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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