Array 1 38253-33277 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZPF01000016.1 Jannaschia aquimarina strain DSM 28248, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 38252 32 100.0 34 ................................ ATGCCATGCCGGAAGGCACGGGAAAGCCCCGAAA 38186 32 100.0 33 ................................ CAACACCAAGCTGCGGAAGAAAAATATCCGATG 38121 32 100.0 33 ................................ GTGGGCTTCGGCTCCGACGCGATCTGGTCTTCC 38056 32 100.0 34 ................................ ATCATTCAGGTCGGCGACGGCGCGGACCCGGAAG 37990 32 100.0 34 ................................ AAGGTTCGCGTCAGGTCTTCGAAGTATACGCGCA 37924 32 100.0 34 ................................ TTCTCGTCAGTCATCAGACGGCCTCCTCCAGAAA 37858 32 100.0 34 ................................ CGTTCGCTCGACCGTGCCTCCGGTCGCGTTAGAA 37792 32 100.0 34 ................................ TGCTCGTGCGTTTCCTCCGTGTCGCGGAAGATCG 37726 32 100.0 34 ................................ AAATTCACAAAGACAGGTTATGTCGGGGAAGGAT 37660 32 100.0 34 ................................ GGGTGCCCTCGTATTTGTCCTTCACCGCACTCAG 37594 32 100.0 34 ................................ TGGCGTACAAGGCGACCCGCTCCGGCGGGAAGGT 37528 32 100.0 35 ................................ CGGTCGCGACAGGTCTGCCCAACGTGCCGGGGCAG 37461 32 100.0 35 ................................ CTCGGCGTCGCGGAAGATCGCACCCGTGATCGACT 37394 32 100.0 34 ................................ CAAGCCGCCACGGTGGACAACTCGCCCTTGGCCA 37328 32 100.0 34 ................................ GGTAGCGTGATGCCAAGCCACGCAACCGAGAGAG 37262 32 100.0 34 ................................ GGCTGCGGGTAGTTCGGGAGCGGCCCCGCCGAAC 37196 32 100.0 34 ................................ GTGTGCGGGACGGTGTTCCGGGGACTTTCCAGTC 37130 32 100.0 34 ................................ ACGAATCCATCGACGACCATGTTGGTCATATCAT 37064 32 100.0 34 ................................ TTTGTCTGCATATGCCCAATTCCAGCCGCCAGCG 36998 32 100.0 34 ................................ ACCTTTCGGAAAAATGGCGCCCCCTATGGGGCGC 36932 32 100.0 34 ................................ CGGTCGAAGCTGCGCGCGACCTCTCCCGGCTGCT 36866 32 100.0 34 ................................ AGGCCAGCCTCGCGTCGCTCCAGCGCGAGGTCAA 36800 32 100.0 34 ................................ TCACCGAAAATGACCCGCGTCACCGGTTCAACGG 36734 32 100.0 33 ................................ GATGCCAGCGGCCTTGATGCAGTGCGCAAACTC 36669 32 100.0 34 ................................ TTACGCGCACCTCCGAAAGGCCAGCAGCGGCGTG 36603 32 100.0 34 ................................ GTCGGCACGTTTTTCGGTTACCTCTGTGTCGGAT 36537 32 100.0 33 ................................ AACATTGGCGTTTTGGTCTGCGGTGCGGATCAC 36472 32 100.0 34 ................................ TATAGCGGGGGCGGCGAGGCGCCCGAGGGCGAAA 36406 32 100.0 34 ................................ ATCTTCGGCGCGCGTGAATTGGCGGGACTTACGT 36340 32 100.0 34 ................................ ACCGTGGACGGCAGGCTCGCGAGAGAGAGAACCT 36274 32 100.0 34 ................................ TTCGGCAATGCGCTTATTAAAGGCTAGGCAAAGA 36208 32 100.0 34 ................................ AGGGCAACGCAGAGTCATGTTTTCGCAATCCCAG 36142 32 100.0 34 ................................ GGTCCGGCAGCGGGCAACGGAGCATCGTTGTCCT 36076 32 100.0 34 ................................ AGGATGTGAATGGCAACACCACTCGAGCATCCGT 36010 32 100.0 33 ................................ TTGCGGCCTGCGACGGGGTCAGGCGTGTCGCGC 35945 32 100.0 33 ................................ TCACCGTACAGCACCCGCGCGCCTTCCGACGCG 35880 32 100.0 34 ................................ CCCAGCGACGAGGATATCGAGCAGGCGGCACCCA 35814 32 100.0 34 ................................ GGGAGCGCGCTGAACAAGCGAAACGAAAGTAGCG 35748 32 100.0 34 ................................ ATCTGATGGTTCTACTGACGGTTCCCCGGACACT 35682 32 100.0 34 ................................ TTCCACCAAGCGCATTGGCAATGACCGTCTCGGA 35616 32 100.0 34 ................................ TACTCCGACAACGCCGGCACATTCGACGCCAACG 35550 32 100.0 35 ................................ CATCCGTTGATGAGGAGAAAAGTCGAGCCGGTAAA 35483 32 100.0 33 ................................ AAGATGCGTGTGATCGAGACGGAGTTGGCTTGG 35418 32 100.0 34 ................................ ACGTCGCAGGTGCTCGGGCTGTTGGGATTGCCGT 35352 32 100.0 34 ................................ GATTAGGTCGTAATGAGAAATCACTATGACGTGA 35286 32 100.0 34 ................................ TCGGCGCAATCGTCTTGAGGTCCGCAAAGTCCGT 35220 32 100.0 34 ................................ ATCTGTTTCTCCTCGGGACACTGCGGCATCAAGG 35154 32 100.0 33 ................................ CGGTGTGCCGTGTCTCTATTTGAATCCAGCGGC 35089 32 100.0 34 ................................ TCGGTCACCGAAGATGCTGGCGGGCAACCGGACC 35023 32 100.0 34 ................................ AACGGCGGAGGATCTGGCAAACCTATGGCTCCAG 34957 32 100.0 34 ................................ AATCCGAGCGCCGATACCAATCCAGGTATCGTGT 34891 32 100.0 34 ................................ CTCGCCAAAAGCACTGATGGCCTGACCGCGCCTC 34825 32 100.0 35 ................................ AACTCAGCTTTTAGCAGGTTTCCCGCTCGGCCCTC 34758 32 100.0 34 ................................ ACAACTCCGTCGCGCCCCTGCGCACCGTCCAGGC 34692 32 100.0 34 ................................ ATTGGTCCCTCCTGACAGGCCAACCGGGCCGAGC 34626 32 100.0 35 ................................ CCCGCATCACGGCCACCGGGACATGGCGATCGATA 34559 32 100.0 33 ................................ CCTTACTACGGCTCCAAGTGGAATATCGCTAGG 34494 32 100.0 34 ................................ GCCTGCCCTTTCGTTGTACATCTCGACGGCTGTC 34428 32 100.0 34 ................................ ACGTGCCCGGAAACCGTGATGCGCGCAATACCCT 34362 32 100.0 34 ................................ CATCAGGACAGCTACCACTCGTGGCCATTCCGCT 34296 32 100.0 34 ................................ CATCGCGGCGACTTTCTTGGCGAGTTCCTGCACC 34230 32 100.0 33 ................................ TTCCCGGATCCGGCGAGGCTGCCTTGGCCGACG 34165 32 100.0 33 ................................ CACATCGCATACCAAATTGTCCCGGCGAGCGCC 34100 32 100.0 33 ................................ ATGGAAGCCACTTGGCGCCCCAACCCCAGATGT 34035 32 100.0 34 ................................ GCTGCCGAAAGCAGACATGGTGCGCGAAGAATGG 33969 32 100.0 34 ................................ GGTGCGTAAGTTTGCCAAGCGCCACGGCATTACG 33903 32 100.0 34 ................................ CGTCTGACAAGGCCAAGTTGCACAAGGGGCGGCC 33837 32 96.9 34 ..T............................. AGTTGTGTATGAGACGGGCGGCTTTAGTGTCCCT 33771 32 100.0 34 ................................ GCCGGTACCCTCGCCATCACCTGTCCCGCCAGTT 33705 32 100.0 34 ................................ AATCCAATGACACCGCCTGTGCGGCGCCCCCCCG 33639 32 100.0 35 ................................ GCCTGCTTCGCCTTCGAGGTGCCGGTTGCAGAGGC 33572 32 100.0 34 ................................ CGCAGATACGATCACCTGCCCACCAGAGACCGTC 33506 32 100.0 34 ................................ TTGACTACGGCTTCGATCTGGCGCCGGTCCTGGC 33440 32 100.0 34 ................................ CGGACGTAGAGCTTGGTGACGCCCTTCGGGACGT 33374 32 100.0 34 ................................ CTGGGCAAGATGTTGAAGGACCTGATGGGCTCCG 33308 32 96.9 0 .............................C.. | ========== ====== ====== ====== ================================ =================================== ================== 76 32 99.9 34 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : GCTCCTGCGCGGCGACCTCGATGCCTATCCGGCCTGGGTGTGGTAGGTGTTGGTTCTGGTGACCTACGATGTGGCCAGCGGGCCGGGCGGCGCGCGGCGATTGCGCCGCGTGGCTCGGATCTGCGAAGATCATGGCCAGCGCGTCCAGTACTCGGTCTTTGAATGCGAGGTCGACCCGGCACGCTGGACGGCGATGCGCGCTCGGCTCGTCGAGGCGATCGACCCCGCCACCGACAGCCTGCGGTTCTACTTTCTGGGGCGGGAATGGCGCAGGCGGGTCGAGCATGTCGGCGCGCGCCCGTCCGAGGACCCCGACGATCTGATAATTGTGTGATGCGAACCCCAAGCGGCCGTTCGGCGCTTGAGAGGTTCGCGGGCCTTGTAGACATCTGTTTTGCAAGTCATCGAGGCTTTCTCCGAGGCCGTCAGGAGCCGACCGCACGGAGATTCGCAGATCGCCCGACATTTCCTGTCCGAAAAGAGCATGATAGCCAGACGGA # Right flank : ACACGCCCGAGGGATTGTTCGACTTCATGGCCGCGTTGCCCCCTTTCGAGGGCGAACATGGCCAATTCTGGAGCGATCGGAAAGACGAAGCGATCACCGTCATGCTGAGCCTGCGCGGAAAGCACAGCGCCATCGTCTGCGGCGGATGAGACAGCGGCAATCGGCACGCTGCTCCGCAGCGACCGCACCTCGCGCGAATGTCCGCTCCGGGTCATGGGCCGTCATCCGAAGATACGGCGGCCACGGCCTTCGACGACCGGTCCCCCTGCCCGTCTGCGGTCAGCACCCGCCAGACCGTCGATCGGCTGACCTTAAGTTCCGCCGCGATCGCCACCGGCCCCAGCCCTTGGGCATGCAACTCGTGCACCTTCGCAGCGTCCACCATGGGTTTGCGCCCCTTGTAGACCCCCCGGGCCTTGGCCTTCGCGATTCCCTCCATCTGCCGCTCGCGGCGCAGGTTGGTCTCGAACTCGGCGAACACGCCCAACATGTCGAGGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //