Array 1 7711-9121 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAGP010000014.1 Alistipes shahii strain BL-389-WT-23F Contig_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7711 36 100.0 29 .................................... CCTTATACTATTCGCTTGCATCGTTTCTG 7776 36 100.0 29 .................................... GTTGTGCGTATACACTGACCCGACCCCGC 7841 36 100.0 29 .................................... ACGATACCCCAAATTTAACGCCTCAAAGT 7906 36 100.0 29 .................................... GGGTAATAAGGACGCATATTGCCTTCAGA 7971 36 100.0 30 .................................... CGCTCCGAAGTATTACGAGGAGGCTCTTCT 8037 36 100.0 29 .................................... ACGGAGATCGTGCGTAAATGGCGTGGAGC 8102 36 100.0 30 .................................... CTGGATATAGGCCACGCGCTTACGTCCCTA 8168 36 100.0 30 .................................... ATCGAGAGCCGAAATGGGAAGATTAACAAA 8234 36 100.0 30 .................................... GTCGCAACGTGCTCACCTGCTCGCGCCATG 8300 36 100.0 29 .................................... GTTCAGACTGGGCGCGCCGCGTGGCTACA 8365 36 100.0 29 .................................... CGCAAGAGCGGCAATAATAGACGAAATAA 8430 36 100.0 29 .................................... GTCACGGCAAACCGTCCCGCGGGGAGTAA 8495 36 100.0 29 .................................... TTTGATGCGGGCATGAACACACGCCGTAC 8560 36 100.0 30 .................................... TCTGACGCACCGCGTCGATCTGTGCGGATA 8626 36 100.0 29 .................................... ATTCAGTCTAAAACTTTTTCGCTGGATAG 8691 36 100.0 30 .................................... CCTACGCTGGACGTCGCTGGTTCGGACAAG 8757 36 100.0 29 .................................... CAAGAGTATTGTCAAAAAACTCGAGCGCA 8822 36 100.0 30 .................................... CAGCTCGAAGTCCCGTACATAGGATATGTC 8888 36 100.0 30 .................................... CATTCGGCTCGACCAACGTCCTGTTCTGTT 8954 36 100.0 30 .................................... TAGTCGCACCGACACTGTGCTGCAAACGTA 9020 36 100.0 30 .................................... AGAAGTTCATAACGAAAATGCCGGCCGCCG 9086 36 94.4 0 ...............A.......A............ | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 99.7 30 GTTGTGGTTTGATGTGGAATTTCGATAAGATACAAC # Left flank : AAAGATTGCATATCCTTTATTGGAGTAGTCGAATGTCAGAAGTACGCTTGAATGCTTATCGAATCATGTGGTTGTTTGTCTTTTTTGATTTGCCAACCAATACAAAAACGGAACGACGTCATGCGGCGCAATTTCGCAAGGCATTGGAAAAAGATGGTTTCACAATGATGCAGTATTCAGTCTATGTGCGCCATTGTGCATCGAAGGAGAATATGCAGGTTCACATTAAGCGGGTTCGACGATCGATGCCTCCGACAGGATTTACAAGTATTCTTGCTGTAACGGACAAACAGTATGGAGACATATTAAATTTTTGGGGTAAAAGCGAACGAGCAAAACCGGAAATTCCGCAACAATTGGAATTTTTCTGATAAATCGTTATTTTCGTTCTTTGAAATACGGAAAATGCATCAAACTGGCTTCGTCGGAACACCCGATCGTATTTTTATAGTGGCAGACAGCCCGTAAGTAACACTTTATCAATCAATATGAGGCCCGAC # Right flank : CCGGCAGTATTGGAATGCTGCATAATTGCAGCTGTTGTTTACATTACCCTTTTGACTCAAGAAGATTTCAAACTCCCTTAAATACGTCAAATCCAATTCATCAAAACGCATATTGACCGAGCGGAATTGCGACACAAGGACCAACGTTACCTTATGTTTGCTGGCGGAACTGTACTTTTCGACTTTTTCCAAGCGTTCGATAATCTGTTTGAAGTACTCCCCGACCGTGCAGTTGATTCGTTTGCCGTTCTGTTCAAACAGCGTATCGAATGTAACGGGAATTTCCAGCACCTCCAACTTTTTGATTTTCTTCTCGTATTCACGTATCTTGGAGGTTATTTGAAACTGTATTTCTGCTCTATCGGGGCAGTCGGCGGTAGGTTGTTGCTTGTCGAAATCCCAATGCACCAAAGCTTCCGAAATGCCCAGACCGACGAACTTACGGCGGCGGTCATGGGTGAATACGAGGACAAGAGGGGCTAAATGGTTTCTGTTGATAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTGGAATTTCGATAAGATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //