Array 1 3961827-3961379 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP038437.2 Halomonas sp. Y2R2 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
   3961826	    28	 100.0	    32	............................	CAAAACATTGACAACATCCGTGACACGTCTTC	
   3961766	    28	 100.0	    32	............................	TATTTGTTCCGCAAAAGTGGTCATAATCCACC	
   3961706	    28	 100.0	    32	............................	AAACGGACGTCATGATCGACGCACTGAACAAA	
   3961646	    28	 100.0	    32	............................	GTCGAATCGTCAACGTGGCCGCGTTGCTGGAC	
   3961586	    28	 100.0	    32	............................	TCAAGCTCCTCTTCGAGATAGTATGTGAGGCG	
   3961526	    28	 100.0	    32	............................	AGAAGATAGCTGACTACGGCAAGGTGTTCGAC	
   3961466	    28	 100.0	    32	............................	GGACAGATAGCGGCACACTTCGCGGACGGTAC	
   3961406	    28	  92.9	     0	...........C.C..............	|                               	
==========	======	======	======	============================	================================	==================
         8	    28	  99.1	    32	GTTCACTGCCGGATAGGCAGCTCAGAAA	                                	       

# Left flank :   GCCTGTTCTACCAGGCTATGCAGGCCGCACTGGAGATCGTCATCGACGATGAGCTCGAACTGGACGACTATCTTTTCAACCTTGAGCGCATGTTCGGCAAGGACACCATGCAGACAGTGGTGGATTCAGTGAATGGCGAGGTGCGCTTCCCAGGCCTGACCCCGACCAGCATGCAACTGGAGGGGCTGGACAAGCACCAGCGCCTGATCGAGAGCTACAAGAAGCTGCATGCAGCACGTGCCGCACTGGCCGGGAAGTCTTGATTACTGGGAAATACCGTTAAATCGCGCAGGCTGTGTCGGGAATTCATCCCGCACAGCCTCGGCAGCATTCAAGGCTGATACCAGGGAAGGTTATGCCCCAAATCCTGACCCTTTTTTCAGCAGTCATTTTCGGTTGTTGAAAAACAATGGGTTAGGAGCCTGTGTCAAAAAAGGGTGAATGCCATAAAGTTCAAGCTTGTTGCATAGAAATCAACTTGTTAGCAGAATGTTGCCCTA
# Right flank :  TTAAAAGGCTGGCCATAGCACATTGCTATATATAGCAATGTGCTATACGCTTTCCCTGTCAAGACAGGGAAGGTTTCCATGCACATCATCACGCAGAAGCGCATCTGGGAAGCCATGGAGAGGTGGCCACATGCGGCGACGGCTCTGAACTCATGGTATCGACTCATGAAAACCTCGGAGCCTAAGGACTTCGCTGCAATGAAGGGCATCTTCCCTGCTGCTGACAAGGTAGGGAGTTATCACGTATTTGATATTGGTGGTAACAAGATCAGGCTGATTGCCACGGTGCACTACCGGGCCAAGAGAGTGTTCATTCGCCACATTCTCGATCATGCCGAGTACGACAAAGGAAAATGGAGGAGTGACCCATGAATGCCATTCTTGATCAGGCTGCCGCACACTGGGCACACATTGCTCCACTGCTCGCAGAGCCGCATGATGAAGAGGACTATGATGCCAAGGTGGCGGCCCTGGATGAACTGCTTGAGGTGGTTGGTGAT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGGATAGGCAGCTCAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGGATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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