Array 1 1065747-1070533 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP051155.1 Gephyromycinifex aptenodytis strain NJES-13 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1065747 29 100.0 32 ............................. GGCACACCCCTCATCGTGTGGCGCGACGTCCG 1065808 29 100.0 32 ............................. TGCACCATGCTGACGGCTTTACCGTAGTAGCG 1065869 29 100.0 32 ............................. CAGCGCCCACGCGCCCTCAATGGTTGGGTGAT 1065930 29 100.0 32 ............................. GATCAGAGCCTTGAACTCTCGACCGCTGCGCG 1065991 29 100.0 32 ............................. GGCCGCGAACGCCGCGGCGGGGGCCTTTAGGC 1066052 29 100.0 32 ............................. GTGCGGTGGCTGATGCGGGGGTGGCGCAGGGT 1066113 29 100.0 32 ............................. GTCGCCGACGAACGTCTGCGGGAGCAGATCGC 1066174 29 100.0 32 ............................. GGGTCACTGTCCGTAGGGCTGCGTCGGGGCAC 1066235 29 100.0 32 ............................. AGGTGTCCAGTTCCCCCAGCGGTTGAGGACTC 1066296 29 100.0 32 ............................. CAGGCTAAGCAGGCCGCACAAGCCGAATACGT 1066357 29 100.0 32 ............................. ACAGCAGGTTCACCAGGCATTCCTAGCAGCCG 1066418 29 100.0 32 ............................. GACGGCGCCGAGATCGGAGAGTTCCTCTGCAT 1066479 29 100.0 32 ............................. ACCGCCAACGGCGCAGTCCTCGACGTCACCGC 1066540 29 100.0 32 ............................. GCCCCGGCTGTTGAGAGGGCCCGTCCTGTCGC 1066601 29 100.0 32 ............................. AGTCGGCGCCTGTCGCGTCGAGGACAGCCATA 1066662 29 100.0 32 ............................. AGGATGCCGTCGACGGACTGCCCCGAGAGGAC 1066723 29 100.0 31 ............................. GACCCGAGGTTGGTGGTCGCGGAGCGTGTGG 1066783 29 100.0 32 ............................. AGTTTCCGGAACAGCATTGAAGCGCTCGGCGG 1066844 29 100.0 32 ............................. CGGACCCTAGTTATCGCACCAGCTCTGGAGAC 1066905 29 100.0 32 ............................. CAACATCCTCAATCGTCAAGAAGCCCGGAGTG 1066966 29 100.0 32 ............................. CCGTCCATGTGGGGTCACCACGTTTACGGCCG 1067027 29 100.0 32 ............................. GACGTAGTACATGTTCGGGTCGGTCATTATGT 1067088 29 100.0 32 ............................. ACGCGGGTACAGCGTGCTTACACCCTCGACAT 1067149 29 100.0 33 ............................. ATAGCCGAGATGTTCCGGGAGTGGGATATTTGG 1067211 29 100.0 32 ............................. CAACGGTGTGATGATCCGCAACGAAGTGAAGG 1067272 29 100.0 32 ............................. CGGATGAGGTGCGAAGCTTGCTCGAGCCGCCA 1067333 29 100.0 32 ............................. ATTTGTGCAGCCGTTGGATGTTCTTACTGAGG 1067394 29 100.0 32 ............................. TGGGCCGCGGTGTGCAGGAAATCTGTGATGCC 1067455 29 100.0 32 ............................. GGCAGCCGCACATGGAAAGTGCGCTTCCGTCT 1067516 29 100.0 32 ............................. AGCCATCTGGGTGATCTGGTCGGCAATGGTGT 1067577 29 100.0 32 ............................. CGTCCGTGGCCCCTGCACCGAAGTAAAGATCG 1067638 29 100.0 32 ............................. GGCCTCCGTCGCGATGAAGCAGTTCAAGCTAG 1067699 29 100.0 32 ............................. CTGCTCAACTCCAAGGTCGCCGTCCTCGAAAA 1067760 29 100.0 32 ............................. ACGGCTCACATGAGGGTTCGCCGTACCTTTTG 1067821 29 100.0 32 ............................. TGTTGGCTTCTTTCTCTGGCGCGGAACGCTGC 1067882 29 100.0 32 ............................. GACGCCCGAGCCCCCTCCTGATACGCCATCCC 1067943 29 100.0 32 ............................. GCACCGCCACCGTCACCGTCCCCCAGCTCCTG 1068004 29 100.0 32 ............................. GATCTCGGGGGTTAGGGCGCCTTCGGTGTCGT 1068065 29 100.0 32 ............................. GCTTGCTCGAGCCGCCACGCTTCGCCGGCTTT 1068126 29 100.0 32 ............................. GGGACGATCGGTGACGCGGCCCACGCAAAGTC 1068187 29 100.0 32 ............................. GTGCCCGGAGAATGTTCACACCGTCGAGGTTC 1068248 29 100.0 32 ............................. ATCGCCGCCGCCAAGGCGGAGGGCCTTGGGCT 1068309 29 100.0 32 ............................. CCGCAGGTAGCAGCGAAGACCGCCGGCGCGAT 1068370 29 100.0 32 ............................. GTACTCAAGGGCCTGCCGTGGGGCAAGCTCCA 1068431 29 100.0 32 ............................. GTGTCCCGCCCAGGCGGCGGCCTCGACATCGC 1068492 29 100.0 32 ............................. GGCACCGAAACGCAGATCGGCACCACGTACGC 1068553 29 100.0 32 ............................. ACCCGAACCAGCGAACCCCGCTACGGCCACAA 1068614 29 100.0 32 ............................. GTACGCGCCGCCCGCTAACGGGATCAGGTGAT 1068675 29 100.0 32 ............................. TGGATCACATCGTGTCTGGCTGCTCCTGACCG 1068736 29 100.0 32 ............................. ATCGCAGACGGCGCAGGCGCCGCAGTCATATC 1068797 29 100.0 32 ............................. AACACCAGGCACCACGTCCGCGTAGAAGTGAA 1068858 29 100.0 32 ............................. GCCGGGCCCGGCCGTGATCTTGGGTTGGTGGG 1068919 29 100.0 32 ............................. CCGGGCGAAACGTCAGCGCTCACCGACCCCGC 1068980 29 100.0 32 ............................. GTGGAAGACGCCGAGATAGTCGAGGATGAGCC 1069041 29 100.0 32 ............................. GGTTCCCTGACCTGCGCTTGAAACGCCCCTGA 1069102 29 100.0 32 ............................. GGGGACCCAATGCCCTTGCGCGTCCAGGTACT 1069163 29 100.0 32 ............................. GTGGCTGCGTTCGGCCGGCGACCTCGAACTGG 1069224 29 100.0 32 ............................. TGGTTCGCGCTCATCCGAACGCCTAGCGTCCC 1069285 29 100.0 33 ............................. CAGCGTCCACGCCCCGGCCAGGGTTGGGTGATC 1069347 29 100.0 32 ............................. ATCCTGGCCAGCGTCAGCCTGCCTGCCGGTGT 1069408 29 100.0 32 ............................. GTACGCCAGCGCCTACGCGCCATGCGGGTGGG 1069469 29 100.0 31 ............................. ACCATCGCAGGGATGCTGGTGCGCATGGCCG 1069529 29 100.0 32 ............................. GCCATTGACGGCAAGCCAGCATTCCCCGAGGG 1069590 29 100.0 32 ............................. GAAAACAACTCTCGCCGTAAGAGATTCATTCA 1069651 29 100.0 32 ............................. TCGTCCTACCCGGCCGGCGCGCCCACCATCAA 1069712 29 100.0 32 ............................. TTTGCGTGCGTTGTTGCCGTTGACGGTGACTC 1069773 29 96.6 32 ............................G TGATCATCGGTTCCACGACCACCATGGGCGTG 1069834 29 100.0 32 ............................. ATGATTCAGCCTGCCGTTCACGCGGGGGCGTT 1069895 29 100.0 32 ............................. GAATACCGGGCCGTTCCTATGTGACACACACC 1069956 29 100.0 32 ............................. TCCCGATGCCGTGGGCGTCCGCCTGCGACCGA 1070017 29 100.0 32 ............................. CACCCCGGCCTCGAAGTAAGAACCACCTCCTC 1070078 29 100.0 32 ............................. CCTGTCGTGGTCTGGGAACCCTGGTCGTGCCA 1070139 29 100.0 32 ............................. CAGGTGCACGTCGGTGGCGTCATCCCGATGGC 1070200 29 100.0 32 ............................. CAGCAGCGCGCCCTGTTGAACCAGCAGGAGGC 1070261 29 100.0 32 ............................. CAGGCTCGCGCTCGGCTCATCGTGGCTGACAA 1070322 29 100.0 32 ............................. CGTCTCATGGGTGTGAGCTCGGCTGAGTCGTT 1070383 29 100.0 32 ............................. GGTCACCACGTCGGTCGTGACGGGGATGATGA 1070444 29 100.0 32 ............................. GTACGAGTTCACCGATGAGAAGTGTGAAACGC 1070505 29 89.7 0 ...................A.AG...... | ========== ====== ====== ====== ============================= ================================= ================== 79 29 99.8 32 CCCCGTCCCGCGCACGCGGGAGTGATTCC # Left flank : CCGCAGATCGTTAACGACATCGACATGGTTTTAGGGATCGATGTGGCAGATGACTGGTCGGTGGACGCTCTGGAACTGTGGGGACCCGCAGGCGAAGTTGAAGCAACCTGGTCACATGCGGAGTGGTCATTGTGACGCTGCACGTGTTGGTCACTGAACGGCTATCTCCAGGGCTTCGCGGGGCGCTATCCCAGTGGTACATCGAAGTGAATCCGGGCGTTTACGTGGGGACCGTATCGGCGCGCATTCGAGACCAACTGTGGTCCCAGGTGGAGACGTGGGTGTACGGCAACAACCTCGGGTACGCGCTTGCGGTCTACCCAGCACCAACAGAGCAGGGTTACGAAATGCGCAGTGCTGGCACGAGTCGCTACTCCGTGGTCGACCTTCACGGACTATCACTCGTGTCAGAGCAGCACAAAGAACGCCAAGTCAGCGACTCAGGACCCGAGTTCGACCCCGGCTGGTGACGGCCTGGATAAAATAGCAGGTGGCGCAGT # Right flank : CAGCGAACGCGCCGGGGAACGCAGGCCCCCAATACTCGATGACCCGGGTGCCGGTCACCTGGTCCAGTTTAACCCTTTTGCTCTCGCCCCCTATGGTCCAAGGTGGCGGGTCCGCCCAATCAGCCGCGCCGGTTTAGTTGGCGCAGGTCATTCGACGACGGTGACCGGGCGCCCCAGGGCCTGCAACGGGGCGACGATGTTGTCCGCGTCGCCCACGATGACCACGCTCCAGCGCCGGTCTACGTGCTCGAGGTAGGCCTGCGTCAACCGTTCCGGGGTGAGGCTGAGGGTCTGCGCCAGCACCTGGGAAGTGTGTTCTGTGCCGAGCCCATCCATGGCCCGGGCCGCCGCCTCTGCGGCCACGGCGTCGGCGGTGGCGTACCGTCCGGGCGCGGTGAGGGCGAGATAGTCGATGCCCGCAGTTGTCTCGTCAGCGGTGAAGCCCTGCCCGGCGCCGTCCAGGATTCCGAGTGCAAGCTCCAGCGACTCCGCGGTCACCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCGTCCCGCGCACGCGGGAGTGATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //