Array 1 153711-154698 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZEI01000009.1 Gilliamella apicola strain wkB72 Gilliamella_apicola_wkB72_contig17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 153711 28 100.0 32 ............................ TGCATTTAAAACATTACCCGCATTTATACCAA 153771 28 100.0 32 ............................ ACGAAATTAGATCACTAGCTGAACGTCTATAT 153831 28 100.0 32 ............................ TGTTTCAGTTTTAACAAAATTAGATAATTGTT 153891 28 100.0 32 ............................ TTTTAATGTTGTCATTTCCATTTATGCCACCT 153951 28 100.0 32 ............................ AGCAAAGGCAATGCACTCGTTACTCAGTGATG 154011 28 100.0 32 ............................ AATATAATCGTTTACGGTTTTGCGCTGATACC 154071 28 100.0 32 ............................ TTGTCGATGTAGTCGAAGATGTTAGATGTCAT 154131 28 100.0 32 ............................ TTTTTCTTGATAGAGCGTTGCATATTTACGAG 154191 28 100.0 32 ............................ CTCGCCTAAAGTCTTTTCTTTAGCCTGATACC 154251 28 100.0 32 ............................ TTGAATTGAAATTATTTACCATGGAAAACCAT 154311 28 100.0 32 ............................ AGCGAGTTTTTAAAACGATTCCCAATATTAGT 154371 28 100.0 32 ............................ AGCAGGAATCGAAATAAAGCCATAACAAATTA 154431 28 100.0 32 ............................ ATGCTGACGCAGTGCTTCGTTGGTCGGCAGCT 154491 28 100.0 32 ............................ TCAGGGGCATTCTGCATATCCTGCGGGTTTTT 154551 28 100.0 32 ............................ TAACACATAGTCTTGAATTTTTTCAGCATCAG 154611 28 96.4 32 A........................... TTTATTTCAACCTCGAAAAACTCATCTGCAAT 154671 28 89.3 0 .................CA.....T... | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.2 32 CTTTACAGCTGCATAAGTTGTTTAGAAA # Left flank : TCAATTAAATTATCCACATCTTCATTTCACCAGCAAAAGCACTGGTCAAAACTTTATCATGTGGTTAAGACAAGAAAAATGTACAACACCTGTGCAGGGTAAATTTAACAGTTATGGACTAAGCAAAATAGCAACCATCCCTGATTTTTAATTAAGTATTAAGGGCATTATCATAATGCCCTTAACGCTTTTTATCATGCTCAGTAAGATAAACTTCAAAATTTTTTGAAGAAAGCTTTTTTCAAATGCAAAAAATACCTTACAGTGTTGCCGTGAATTTACTTTAAACTAAACAGTTTTTTTGGGCTGTTTCACAGCAAAAAAGTTGAGGAATGGGATTTTGTGGAGTTCAAAATATAAACTTTAATAACCCTTTTTTTTAGCTAAAAATAAAATTATTAAAAATCAATATATTGTAAAATCGTTAAAAAAAAGGGTTTTGAAAACTAAAATTACTCTTTGTCTTTTTATAAACGATGTTTATAGTATGTAATGTTCTA # Right flank : ACCCTATCAATGGTGAATGAGGACACAATAAAATCTTATGAAAGAGAAGCATAAAAAGTTGAGGAAAGGGGTTTTTGAAACTTAAAAATACACCGATTAATCCTACAAACAAGCTATTTTCCTTTTTCTGTACAATTATACTTACAATGTTTATAGTAGCTTATATTCTTAATTAAGATTAGTTTTGGTCGCTTGTAATATTATGAAACTTCAACAATTACGTTACATTTTAGAAATAGCTCGCTCAGGCTCGATTAATGAGGCTGCTAAGAATCTTTATATTACTCAGCCTAGTCTTTCTACTGCGGTTAAGGATTTGGAAGCCGAATTCGGTATCGAGATTTTTGTAAGAACATCAAAAGGGGTTTCACTCTCGGCTGATGGTGTGGAATTTTTGGGGTATGCTAAGCAGGTTTTAGATCAAGCTCAATTGTTGGAGCAACATTTTTCAAAAAAAGAACCCTCTAAGCAGTTATGCAGTATTTCAACGCAACATTATG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACAGCTGCATAAGTTGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 250738-251126 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZEI01000006.1 Gilliamella apicola strain wkB72 Gilliamella_apicola_wkB72_contig14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 250738 28 100.0 32 ............................ ATTTCGATACAGATCTAACATTTCATTTAACG 250798 28 100.0 32 ............................ AACTCAAAGCGGAAGCCGCACCCGTAAGATAA 250858 28 100.0 32 ............................ GTGAGCCAATAGTTGCCTAGCAAGTTCTTTTT 250918 28 100.0 32 ............................ TGTATGCACAGGGATAAGCAAAAAGCCTCGCT 250978 28 100.0 32 ............................ ATTAGGCATGATACGCACTTCTGGGTCTTGTC 251038 28 100.0 33 ............................ TTTGATCATCATCTCCAGCTATTATGATTGGTT 251099 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 7 28 100.0 32 GGTTTATGCCGTGTAGGCAGTTTATAAA # Left flank : AAGTGATCTCATATTGATGAGGACCACAATCGGCAGCTTGTTTTAACGCATCGATTAAAGGTTTCGGCGGATCAAAATCTGGAAACCCCTGTGACAAATTGATAGCTTGATATTGATTAGCGATCCGAGTCATCCGACGGATAACCGAATCGGAAAAGTGATCGAGTCGATAGGCTAGTTTATGCATTGTTTTTTATATATTAAAATTATGAAGTTGGAGATTATAATATAAAATCTTTCTATGACGGTTAAATAATATATTTATATATAGTTATACTTTTTTCTTATAACGGAGTCGAAAATAGCGACTAGATTTTAAAAAAGTTGAGGAGCGGGGTTTTTTAATCCCCAAAAAATATTATTTTTATAACCCTTTTTTTAATCAAAAAATAAAGTAATTAAAAATCATAATATTAAAAAGGTATTAAAAAAAAGGGTTTTTAAAACTCCAAATGCCCTTTGCCTTTTTGCAAACAACGATTATAGTATGTCTTGTTCTA # Right flank : AATATAATTTTCGAATCAATCAACTCAAGTCAGTTTATTCAATGCAGATAATATCCCGTTTCTTAAAAAGTTGAGGAGCGGGGTTTTTTGAGGTTCTCAATTTCACTTAAAAATTATTAAATGATAAAATTACTAAATTTCAAATTCAAAGCCCTAGAATAAAATTTTTCAGGATCAATAATCACTTTTTTAAAGATTTGTAATGATAACATGCTTAATTAAAACAATAGTTAATCAGTTATTGTTTAGATCATTTTTAGATCATATTTACAAAAGTTAATATAAATGAGTGAAAAAAAGTGTTGCATCGTGTTTTTCCAATCACTATACTTTTTACACGGTTTTAGCTATGAGGCTAAAATTTGACAGAAAAGCATAAAATTGTAAATTAATCAAAAAATTACTTGACAGGATAGTCTAAAATGCATTATAATTTTCAACAGCCAACAGCCAACAGCCAACCTGCCAAACCTATCTTTTAAATTCGTCTAAGTCCAGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTATGCCGTGTAGGCAGTTTATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 265943-266210 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZEI01000006.1 Gilliamella apicola strain wkB72 Gilliamella_apicola_wkB72_contig14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 265943 28 100.0 32 ............................ AGCACTTTGTTAATTGCTTTCCATCGACAAAT 266003 28 100.0 32 ............................ TATTGCAAGACGAATGTATGATTATTTTTCAA 266063 28 100.0 32 ............................ TGCTTGTCCGGGTAATTCAGTCATAGCTTGCA 266123 28 96.4 32 ...........A................ AGAAAAATCTAAGAATATTTATTTATTTAATG 266183 28 85.7 0 ...........A.....T....A.T... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 96.4 32 GGTTCATGCCGTGTAGGCAGTTTAGAAA # Left flank : CAACTTGATTACGTACTGTCTCGTCAAGCTTACGCCAAGTCGTACCACGAGTATTTAACAAACTCTGCCAATCAACAAGTTTTAATAAATCACTTAACAACTCAGCCGACAAACCATCGGTTTTATAATTATGAAATTGATAACTGACTTGATGATCATTGAGCCAAGTAAACGCTTTTTTCATGGTATCACAATTCTTAATTCCATAAATAATATACATAACTATTTGCCCTAAAATGAAAAGATAAATCGATTATAACAGCTAAAAAACAGCAAACAAAGGGAAAGCGGGTTTTGTAAAATGGATGATTTTTGATAAAAAAGTTGAGGAGCGGGGTTTTCTAAACCCCAAAAAATATTATTTTTATAACCCTTTTTTTAATCAAAAAATAAAATAATTAAAAATCATAATGTTAAAAAGATATCAAAAAAAAGGGTTTTTAAAACTCCAAATGCCCTTTGCCTTTTTGCAAACAATGATTATAGTATATCTTGTTCTA # Right flank : AATATAATTTTCGAATCAATCAATGCCAGTCAGTTTATTCAGTGCAGATAATATCCCGTTTCTTAAAAAGTTGAGGAGTGGGGTTTTTGAGGTTCTAAATTTTACATAAAAACGTTTAAATGATCACAATCACGATTTTAAACACTAAAATAAAATTTTTGAGGATCAATAACCTTAATTTTTTAAAGATTTGTAATGATAATATCTTTAATTAAAACAGTAATTAACTAAATGTCACCTAGATCCTTTTTAGATCATCTTTACGAAAGTTAACGCAATTGAGTGAAAAAAAGTGTTGCATCGTGTTTTTCCAATCACTATACTTTTTTAACAATTTTAGCAAAGAAGCTAAAATTTGATAAAAAAAGCATAAAATTGCAAATAAATCAAAAAATTACTTGACAGGATTGTCGCATATGTTTTATAATTTTCAACAGGCAACAGGCAACAGGCAACTTGGCCAACCTCTAATTTAAATTCGTCTAAGTCCAGCTCCCAAC # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCATGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 320553-321060 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZEI01000006.1 Gilliamella apicola strain wkB72 Gilliamella_apicola_wkB72_contig14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ================================== ================== 320553 27 100.0 33 ........................... AAATTTGGATGATGAAATAAAACAAAATGTTAA 320613 27 100.0 33 ........................... GGTGACGTATCGAATAGCAAACCAAATCGCAGA 320673 27 100.0 33 ........................... GATGGCTCATATCCCGCGGTCGCCAACGGGGTA 320733 27 100.0 33 ........................... TTTGCTTATGGATTCACTCGCTACAAAAAAGCA 320793 27 100.0 33 ........................... AAATGGGTATTTTGAATACAATGATAATTTGTG 320853 27 100.0 33 ........................... TGATAAAATTGCTAAAGAACATAATTGTAACAG 320913 27 100.0 34 ........................... TCAAAAACAACGCATCAACGCAAAACGGAAACCG 320974 27 100.0 33 ........................... GTACAGTTATTGACAGAACTCCGAGGTGCGCAG 321034 27 92.6 0 .....................A.T... | ========== ====== ====== ====== =========================== ================================== ================== 9 27 99.2 33 GTTTATGCCGTGTAGGCAGTTTAGAAA # Left flank : ATCAGATAATGCTGCCGATAAGCTAGTGCCAGAAGGTATTGAAGGCCGAATTGCTTACAAAGGTTTATTAAAAGAAATCATCCACCAACAAATGGGTGGATTACGCTCATGTATGGGGCTAACGGGTTGTGGAACTATCGATGAGTTACGCACAAAATCGAAGTTCTACCGCATTACTGGCGCAGGTATGAAAGAGAGTCATGTTCATGACGTTCTAATCACTAAAGAGCCACCTAATTATCGAGCGGGTTAATCAATAAATATAAATAAAAAAAGGATTCAGTGTAATCCTTTTTTTATGAATAAAATTTGCTTTAAAAAAAGTTGAGGAGCGGGGTTTTCTAAGCCTCAAAAAATATTATTTTTATAACCCTTTTTTAATCAAAAAATAAAATAATTAAAAATCATTATTTTAAAAAGATAATAAAAAAAAGGGTTTTTAAAACGCCAAATGCCCTTTGCCTTTTTACAAACAACGATTATAGTATGTCTTGTTCTAA # Right flank : AATATAATTTTCGAATCAATTAACATCAGTCAGTTTATTCAGTGCAGATAATATCCCGTTTCTTAAAAAGTTGAGGAGCGGGGTTTTTGAGGTTTTAAATTTCACTTAAAAAGTTTTAAATGATCAAACTTACTAAATTTCTAATTCTAAGCCCTAAAATAAAATTTCCGATGATCTTTAATCATATTTTCAAAGATTTGTAATGATAATATATCCAATTAAAACAATAGCCAATCAATTATAATCTAGATCCTTTTTAGATCCTATTTACAAAAGTTAACGTAATTGAGTGAAAAAAAGTGTTGCATCGTGTTTTTCCAATCACTATACTTTTTACACGGTTTTAGCTACGAGGCTAAAATTTGACAGAAAAGTATAAAATTGTAAATAAATCAAAAAATTACTTGACAGGGTAGTCTAAAATGCATTATAATTTTCAACAGGCAACAGGCAACAGGCAACCTGGCCAACCTATGTTTTAAATTCGCCTAAGTCCAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATGCCGTGTAGGCAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.26%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //