Array 1 5065-8798 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHYK01000032.1 Helicobacter sp. 10-6591 NODE_32_length_8941_cov_22.0308, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 5065 36 100.0 30 .................................... TCGTTAAAACACAGGGCGATAAGATTCTTG 5131 36 100.0 30 .................................... CAAGGCCGCAAGGCTCGCCGTCGCGTTATT 5197 36 100.0 30 .................................... CAGAAAACCACCTACATCTACCTTTAGTCA 5263 36 100.0 30 .................................... TCAAACTCGCTGGGGCCTCCATACAAACCG 5329 36 100.0 30 .................................... TTTTTTCGATATTCAATAGAATCTCGATTT 5395 36 100.0 30 .................................... TAAGTTCGGTGGTGTGGTCGCGGTGTGGTG 5461 36 100.0 30 .................................... TCAAAAATCTCGTTTACATTCTTTGGCTTG 5527 36 100.0 30 .................................... AACAAGGGACGTATAAAGACGAATAAAATC 5593 36 100.0 30 .................................... GAAGGTTCAAACACTGGCGTCGGTACAATG 5659 36 100.0 30 .................................... TTATGGGTATAGCGCTAGGCCTTGTGATGG 5725 36 100.0 30 .................................... GCAAACCAGCCTTTTAATTGATAAAATTAA 5791 36 100.0 30 .................................... GCCACTGGGTGGCAGATTCACTAACCATCA 5857 36 100.0 30 .................................... TCAAAGTTAAATCGCTCGGCTAATGGTTGA 5923 36 100.0 30 .................................... ATAGCAAGTCGTTTATACACTCTTGTATAA 5989 36 100.0 30 .................................... TCACAATTTAAGGATAAAAAATGAAAAAAA 6055 36 100.0 30 .................................... CTCTATCTCTTTACATATCTTTATTGCTGC 6121 36 100.0 30 .................................... AAAAGTTTGATACAATTGCAACGGCTAAGG 6187 36 100.0 30 .................................... TATATAATAGGCTTCTAAGGTTTAGCTCTT 6253 36 100.0 30 .................................... AACATGCCATGAAGCCAAAAACCCAGAAAA 6319 36 100.0 30 .................................... CCCATGCAAGATTATATCAACTATGCAGAA 6385 36 100.0 30 .................................... ATAGGAAAGCAATTAAGCTTATTTGACTTT 6451 36 100.0 30 .................................... ATTTTTGCCAATTAAAAACCACTTAAAATA 6517 36 100.0 30 .................................... CAAATACACCGCTTGTTTTTAAGCTATGTA 6583 36 100.0 30 .................................... CTAAAACAAGCCCAAAGCATAGCCCAAATA 6649 36 100.0 30 .................................... TGCAGAGAGTGTCAACATTGCTATGCTTGC 6715 36 100.0 30 .................................... AAAATTTAAAACTTTGTTTTGTAAGGATTG 6781 36 100.0 30 .................................... AATTTACGCGCTGTGAGCAATGCCCTTTGT 6847 36 100.0 30 .................................... ACCGAGGGCATTATGATTTTCACACGCTTT 6913 36 100.0 31 .................................... TAGATTCTGTAGAGGTCTTTGTGGTGTTTGA 6980 36 100.0 30 .................................... GCACGCATTTAAACAAGCACGCACGCCAAT 7046 36 100.0 30 .................................... TATGGCAGACTGCAAAAGATGAGAGGGTTA 7112 36 100.0 30 .................................... TTAAAAAATGCTGGAAATTCGGGATTATCG 7178 36 100.0 30 .................................... ACAATCGTAACGCATTAAAAAGCACTATAA 7244 36 100.0 30 .................................... CTGGTTTTGGATGTTACTAAATTTGATTTT 7310 36 100.0 30 .................................... ACAATAGAATGATAGGAGTCACATATGATG 7376 36 100.0 31 .................................... TTAAAAAGTGCTGGAAGTTCGGAATTATCGA 7443 36 100.0 30 .................................... TTAACTCTACTCACACTCTATCCTTAATTA 7509 36 100.0 30 .................................... TCCTGATATGATGTACTGATTTCATTTTAA 7575 36 100.0 30 .................................... AAGGATTGTTGGTGAAGTGCTTTAATCCTT 7641 36 100.0 30 .................................... TACAAACCGCTTCTATTGCGCCCGCCCATA 7707 36 100.0 30 .................................... TAGCATTTCTGTCTCCTTTAGAAAAATTTG 7773 36 100.0 30 .................................... GCAAAGAGCGAGCTATTAGAAGCTAAAAAG 7839 36 100.0 30 .................................... ACAAAGAGGTTCTCAGATTTCAGTACCTAT 7905 36 100.0 30 .................................... ATTGCTGTATTGCAGCCCCCACCTTTTGGC 7971 36 100.0 30 .................................... AGATTCGATGATAACGCACGCGAGTTTTAT 8037 36 100.0 30 .................................... TTAAAGCGATACGGATAATCTTTAATATCG 8103 36 100.0 30 .................................... CGAATGTTCGATGATTCAGATAGACAATGG 8169 36 100.0 30 .................................... TTAAGGTTTAGAACAGCCGTTATAAAAACT 8235 36 100.0 30 .................................... ACTATACCCCCCTCTTTGTCCCGACTGATT 8301 36 100.0 30 .................................... TCGATAGCAAACCCATTAGCAACGCTCTCG 8367 36 100.0 30 .................................... CATAAAAGCGAGTATGTTAATCCAAAGTGG 8433 36 100.0 30 .................................... AGTTCGTTGTTTTTCTGCTTTATGTTTTGC 8499 36 100.0 30 .................................... ACAGGCGAACTATTAGCATTGCAATATAAG 8565 36 100.0 30 .................................... AATATTTTGCGTTACCTGCACATTGTTATT 8631 36 100.0 30 .................................... AGGGGGGTTATTTCTACAACATGGCATTTA 8697 36 100.0 30 .................................... GGGATTATATTACCAGTGCTAGTGCAGAAG 8763 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 57 36 100.0 30 ATTTTAGCGTAAGAGAATTTAATAAGCGGCTAAAAC # Left flank : GCCAATCGTCATTTGGACAAAATAAGCCTTATCGTGCCGCCAAAGGGGCATATTCGAGGATTAATCCTCACAGAAAAGCAATTTGACAATATGCGGCTTTTGCTTGGCAAACCAAGCGATAATGAAAAAGCCCATGCACCCAAACAGCTCACACTTTTTTGATATCTTTGTAGGGTTTGTGTGTTTTAGAATCTTAGTTTATGAAGCTTTTTGAGTATTTTGATAAAAAATAAGACGGAGAGATATTATTTGCTCTAAAATTGCAAATGCTTGCAGAAAAATATAATGCAATTGAGGAAAATCTGTGGGTAGTTTTATGTAGAATAAGGGTTTTTAGGTATCGAAAACCTGCGGGGACCCCTTAAACCCCTTATTTTAGCCGCTTACTCAATTCTCTAGGAAGAATTATGCTTCCTTTTTGCTTAAAATATGATTTTTTGGATATTTTAAGCCTATCACACCGCTCAACTACCGCTCTATACGATGTTTTGGCGAGGTAT # Right flank : TAAAATCTTTAGAATCTATTCCTTTTAAGATATCGTCTCGTGCGAGCATCTCATCTATGCTTATGGACTTCGCCCCAAGAGAGCTTACCAATACAAGTACACAAGAGCGTTTAGAATCCAATTCCCACCTCTAGCATAGCGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAGCGTAAGAGAATTTAATAAGCGGCTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //