Array 1 1072579-1073080 **** Predicted by CRISPRDetect 2.4 *** >NZ_NISS01000001.1 Geobacillus sp. FJAT-46040 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1072579 30 100.0 36 .............................. CCACGTTAGCCCAGCCATTTCGCTTAAATTCGGTCA 1072645 30 100.0 37 .............................. CAACCTAGCACTAAAGACCGTAATGATTTGAACTAAA 1072712 30 100.0 38 .............................. GGTGAATCAAAGATAAACGAAGCTAACATTTCAGCGGC 1072780 30 100.0 37 .............................. CTCGGCGCCTTCCTCTTGGATCAAGCGGAAGATGTTC 1072847 30 100.0 38 .............................. TGGCATACGGCGCTTTCATTCGGGAATTCTACATAGGT 1072915 30 100.0 39 .............................. TCCGCGACGAAGAAAAACGCCTGGCCGAGCGGAGGCAGG 1072984 30 100.0 37 .............................. ATCTGTTCAACAGTTAAATCACGTGGTACAGGAATAC 1073051 30 86.7 0 ...............G..G....C....G. | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 98.3 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CAACCCGTCCCTTTCCGACGATATCGTCCGCGTCGCCCGTTCGCCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCGACGCAATACTGCACACTATTTGGCAGCGTTCCTGCTGGTCTCGCCAAAGGAATTGCCGCGCTGTTGCGCTTTGATGATGCGAGCGATGCAGAAGCCGCCGCTCTGCAACAAACAATCGCCCAGCACGGGATCGAAGGCGCGCTTCGGCAATACGCGGGGCTTGAGAGTGCGCACCCGCTTGTGGCGGCGGTGAAGGACGAGTACGGAAGAATGGAGAAAAACAAAAACTGACCGTCTTGCAAATGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAATATTTTTTTGCGTCAAAATCCTACAACCAACACGGCTCAACAGTATTGACAGAATTTTTGAAACGTGATATTCTGAAAACTGCCAAAAGGGGAAAAGCTTGATTTTATGCGAATGGTTTGGG # Right flank : CGCTATACAGTACGGCACAACTTTTTCTGTCCCCGATGCAGGATTTTCACCCCCTGCTTGCGAATGGATAGAATTGAACACGTTCAAAGAGGGGTGATCGAATGGCTATTGACCACGACCGATTGTTCAAAGAGCTGATTCAAACGTTCTTCGAAGAGTTTCTTCTCCTCTTTTTCCCCGACATCCACGAGCATATCGATTTCCGCCATTTGTCCTTTTTGTCCGAAGAACTGTTTACCGATGTCACGGCAGGCGAAAAATACCGCGTCGATCTATTGGTCGAGACGAAGCTGAAAGGGGAAGACGGGCTGATCATCGTTCATGTGGAGAATCAAAGCTACGTGCAACCATCGTTTCCAGAGCGCATGTTTATCTATTTCAGCCGTTTGTTTGAAAAATACCGCACCCGCATCGTTCCGATCGCTGTCTTCAGCTATGAGGCCCTTCGCGAGGAACCGTCCGTGTTCTCAATCGAGTTTCCCTTTGGCGACGTGCTGCAG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2621662-2621300 **** Predicted by CRISPRDetect 2.4 *** >NZ_NISS01000001.1 Geobacillus sp. FJAT-46040 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2621661 30 100.0 36 .............................. CATGTGGGATGAACCTAGTATCGAAAGTCAGAGAAA 2621595 30 100.0 38 .............................. CATCCTTGACGGCTACGGCAACGCGCAGAACTTGACGC 2621527 30 100.0 37 .............................. GGCGTCAAGTTGAAGCCGTCGATTATGCAGCATTGGC 2621460 30 96.7 37 .............................A CCGTTTGACCTTTATAATATTTTGGCTGTTATCAATG 2621393 30 96.7 35 ................C............. CGGAGTCGGCCGCTTTCTCCACGCGTTTCCGCCCA 2621328 29 73.3 0 ......G...CG.....A..A.GC-..... | ========== ====== ====== ====== ============================== ====================================== ================== 6 30 94.4 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTATTTGCGGCGATCCGAAGAGGAGGAAGCAAAACGGCGACACGAGGTGAGCCAAATGGAAACGAAGGAAGCAAAGCGTGTGATGGAGCTCATCGTCTCATACGAACAGCGGGGGCTGGAAAAGGGAATACAACAAGGAATCGAACAGGGGTTAAAGCAAGGGATGAAGCAAGGACGCCAAGAAGGGATCGAGGAAGGGAAGCTCGACGTGGTGAAGAGAATGCTGGCGAAAGGATACGACGTCGACACGATCCACGAACTGACCGGACTGCCGATGGAGAAGATTGAAAGGATGAAGGGGTGAGACGGCTCTTCGCCGTCAAGCCCCACATTGTCGTCGACCTCCAATCGTGCCAAAACCCCGGGGGATCGACGACAATGTTCTTTTGCGCCAAAATCCTACAGCCAACACGGCTGAACGATATTGACAGAATATTTGCAACGTGATATTCTGGAAACAACCCAAAGGGAAAAAGCTTGATTTGATGCGCATGGTTTGG # Right flank : CCTCTTCAATGTCACGCCATCGTATGAACGTCTTCCGTTTGAAGAAACCGGATGGCTGCACTTCCCCGATCGACCGCTTCGTTTTGCTTCGGCTGCTCATTCTTGCGCCGCTTGCTTTGCAGGAAGCCGCTTTTTTGTTTCGCACATGGAGAACGTTTTGGCATCTGCTTTTTTTGTATGGCCCCATTGATCCACCAGGCATGGTTGTTCACCGCCTTTCTTTGCCGCTGCTGCATTTCCTCAGTCCGATGCGATATACTTGACATGGGAACAATCACGCTTCTTTCTCGTTCACCGTCGTGTCGGCGGACATGCTGCGTTGGCGTTGGACGGTTTGAAAGAAGGCGGAGAAAAGCGACGGGGGTGGGATGGATGCGCCGCAAGCTTCGCGATCTCGGTTTTTCCATCGGCACGCTTCCGGTGGGGAGACGCAATCAAATCACGGATGTGCCTGGGGTGCGGGTCGGTCATGTGACGATTCGTAAAGATGTCGATGAACG # Questionable array : NO Score: 8.98 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 2628744-2630755 **** Predicted by CRISPRDetect 2.4 *** >NZ_NISS01000001.1 Geobacillus sp. FJAT-46040 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2628744 36 100.0 30 .................................... AATGCATTAAGTTTAATTTTTTTAAGCTCT 2628810 36 100.0 31 .................................... TGAGAAGGTTGATTCAAAATAATTATAAAAA 2628877 36 100.0 30 .................................... AGTTTTGCTTTTATATTTTGCCTGTTTTTG 2628943 36 100.0 30 .................................... ACGGCGTTCCTCCTCTCGCATAAAACGCTC 2629009 36 100.0 30 .................................... CTTGAATCCAGATGGCAGCGTGAGTTGGAA 2629075 36 100.0 30 .................................... GGATTGCAACTTTTTGTTTTTCCCGTTTCA 2629141 36 100.0 30 .................................... TCCGATCACACTCCTTTTTTGTCTCGCAAT 2629207 36 100.0 30 .................................... TGTCGATGGCGCCGTCAGCGACTTTCGAAG 2629273 36 100.0 30 .................................... TTGGTGAACTCCTCCTCGTCCTCTTGGTAG 2629339 36 100.0 28 .................................... AAAGCTGATGTACGGTCAGCCGCTGTTT 2629403 36 100.0 30 .................................... TTGAAAGGGGGAAAAGCAATGGATTTGTTT 2629469 36 100.0 30 .................................... AACCGGCTATTTTTCGATCATGGACAAAGT 2629535 36 100.0 30 .................................... GTGAAATTCGATGTTAACGAGACTACTGAG 2629601 36 100.0 30 .................................... GGAATCGCGGCAATCCATACAGAGGCCCCA 2629667 36 100.0 30 .................................... TGAACCAATTAGGGTCTTCACCATTTTCTG 2629733 36 100.0 29 .................................... CAATCCACTCTTGTGGGATTTCGATTGGT 2629798 36 100.0 30 .................................... ACCGAATGTTCACAATAGCACCTTGTATAA 2629864 36 100.0 30 .................................... AAGCAGGGAAATTGACCGGCTTCCACATGC 2629930 36 100.0 30 .................................... ATAAAGTACGGCTGGAAACCACGTTATAAA 2629996 36 100.0 30 .................................... TTCACATGGAGACCGGCTGGCAGGCCTTCG 2630062 36 100.0 30 .................................... TTCACACCCACAAGCAATTCCACATCCTCA 2630128 36 100.0 30 .................................... CCAACACACCGAACAATCACTTCGATTTGT 2630194 36 100.0 30 .................................... TCATCCGTCGGTCTTTCATGCGCAATTGTT 2630260 36 100.0 30 .................................... CCATTTCTGCTTCGATTTCGCTTGGGTCTC 2630326 36 100.0 30 .................................... CGACCTTTTTCTCTGGTGCCGGCTTCACGA 2630392 36 100.0 30 .................................... GGGTGTCACTATGACGAAACCGACATCCTT 2630458 36 100.0 30 .................................... ATAACTATCTTCATCCGGAGAAGAATTCTC 2630524 36 100.0 29 .................................... TGGATTTTCTGCCGCTCATACTTTCCCCT 2630589 36 100.0 29 .................................... GCTAGTTGATGATTAAACTGGATGAGTTG 2630654 36 100.0 30 .................................... TCCTCAAAGAGGATGTCGCATATTTCCGCG 2630720 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 100.0 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AGCTTCGTCACGGCAAGCCGAAGCCAAGACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCGTTGCAACTGCACGTGTATGAGTAAGTTTATGCGGTTGCTCGTCTTTTTCGATCTTCCCGTCGTGACCAACCGGGAGAAGCGCGAATACCGGCGATTTCGCACATTCCTGCTAAACGAAGGGTATGATATGTTGCAGTTTTCGGTCTACAGCCGCGTCTGCCACGGACATGAAGCAACGGACAAACATTTGGCAAGATTAAAACGCAACTTGCCCCCTCGAGGATCGATTCGGGCGATGGTCGTAACGGAAAAGCAGTACGCAAAAATGCAGCTGCTTCTCGGGGAACCAACGGCGCAAGAAAAGAAAGTGACATCCACCCAGCTGACGCTTTTTTAAAAAAAACAGAAATGGTTCCTCTTTTTGCATAAGCGCCTTTGCATTTTTTGAAAGCAAAAAAGCCTGCGATCCTTGAGATTGCAGGCTTTTTTGGATACGT # Right flank : CAAACGCATAAAACCGTTGTCGTCGATCCCCCGGGATTTTTGCACGATTGGGGGTCGACGACAATGTGAGGCTCGACGGCGAAGAGTCTGCTCTGCTTACCCCTTCACCCGTTCGATCTTCTCAACCGGCAGCCCGGTCAGTTCGTGGATCGTGGCGACATCATACCCTTTCGCCAGCATTCTCCTCACCACGTCGAGCTTCCCTTCCTCAATCCCTTTTTGGCGCCCTTGTTTAATGCCTTGTTTGATCCCTTGTTCGATTCCCTTCTCGATTCCCTTCTCGATTCCCTTTTCCATTCCCCGCTGTTCGTACGAGACGATGAGCTCCATCACTTGCTTCGCCTCCTTCGTCTCCATTTGGCTCACCTCGTTTCGCAGTTTGGCTTCCTCCTCTTCGGACAACCGCAAATACGTTTCAAAAAAACCGAACAACAGCCGCTGTTTCGCCTCATCGAGATCAAGGCGGACGAGCATGCGCAAAAACTCTTTTTTCACTTCGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [60.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //