Array 1 340549-340844 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 340549 29 89.7 38 .....G.T...G................. CAAGATTCTAACCCTGGGAACATCTCACTAAGTTTTAG 340616 29 89.7 37 .....G.T...G................. CCGCTAGTGACAACAAACTGTAGTGCATGACCAATAA 340682 29 100.0 38 ............................. CGCACGCACAAAAACTGCACAAAAACTGCTAAAAAATG 340749 29 100.0 38 ............................. CTATAGTGAATAACATCATTTTTACATTTTGCAATGAG 340816 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 95.9 38 GTTTTTTGTGTACCTATAGGGGATTGAAA # Left flank : GAGCTTAAAAGTATCTCTTCTTATATAACAGAAAAGTTAAAGGCTTTGGATTTGAAAGAAGATATACAAACGCTTATGCAGACCGAAGGCGATGTAAGGAAAACCTATTATCAGGCTTTTAACAGTATACTAAAAGATATGGAATTTGAAAAAAGAACCAAAAGACCACCGGAAGACCCTTTAAACGCCATGATATCTTTTGGCAATTCACTACTTTATACTACAGTGCTTAGTGAGATATATAAAACGCATTTGGACCCGCGCATAGGATACCTTCACGAAACAAACCAAAGAAGCTTCACTTTAAACCTTGATATTGCAGAAGTTTTTAAGCCGGTGATTGTGGACAGAGTAATTTTTCAGCTTTTAAATAAAAATCAAATAACTGAAAAGCATTTTGACAAAGATATAAGTTTTGCTTACCTAAACGAATCAGGGCGAGAGATATTTGTAAGAAGTTTTGAAGAAAAGCTAAATACAACAATAAAATACAAAAATAT # Right flank : AAGAGTTTTTGTTAGGTTATAGAATAATTGCTGAGATATATAAGAATGTCATGGTTTATGCGTTCACAATGTAGTGAATTTGTAAAATACATTGACAAAATGCATAAGTTGTCATATAATATACTATAATATGAAAATATAAATTAAGATATTTAAGGAGACTTGTCAATAATTTTGTGTCTCATAACAAAATCTCCTGTTGAATATTTGTAAAACTTCATATGAGGACCCTTTTAATGCAGGAACTGGCTTACTCCACTTATTGTTCTTTAAAATATCTCTCTGGACAAGGATATTTATTTCAAGAATCTCAGCAGATTGGAAATAGCCTCCTAAGTTTATCCTTGCTTTTTCAATCATGCTATTTATACTTTCTACGGGATTGGTAGTATAAATATGCTTTCTTAGATTTTCTGGATATTTCAAGAAGCATAAGTACCTTTCTTTGTTAGCTTTTATCCTTTTTATGAAGCTTGGATAAATAGACTTAAATCTCTCAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTTGTGTACCTATAGGGGATTGAAA # Alternate repeat : GTTTTGTTTGTGCCTATAGGGGATTGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 346956-347117 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 346956 30 100.0 35 .............................. ACAACACCTTTGCCGTTTACAAGCACGTTTGAAGA 347021 30 100.0 37 .............................. TGATTTGACAGCATCAAATACAGTTGCAATAATCTGA 347088 30 93.3 0 ............................AA | ========== ====== ====== ====== ============================== ===================================== ================== 3 30 97.8 36 GTTTCATCTGAACCGTGTGGGTTAAGAAGC # Left flank : ACTTGTGAATCGTGGCATACTTGTCTTTATAGGTGCTCACTCAACTTATACACCTTCGGATTAAAATATGTTATACTATCTACATTGGGGCTTATTGAGCTTCTTAAGTTTTTCTTAAGAGCTGGCCGCACTTCAATAGCTGAATAAGCGTAGAGAGTGTTGGTATGCTTGTGTTGAACCCCACGGCATTTTTAACTTTTTTAGTTAGGGTTTTTAGTAGGTTGTTTATACAAAAATAAGTTTTATTAGCCTTCCAACTTATTGTCTGACAAGCAATTAATTTTGCCGTAAAACCGTAAAGCCGTAATTACATAAAACCGTAAAGCCGTAATTACGGCGAATTTGTAAAAAGCTTGTTAGACAATTATTTAAACTTGATAACGGTACACTAAACTTTGCAGAATCTGGCATTTTCGGAAAATTACCTTCATTTGCGGGGGGGTACCCCCTTGACAAAACCATTGATACACTATATAATATTAGGAGTAGTGATTTCTGGG # Right flank : AAGAAAACGTATTGTATAAGTTCAGATAGACTGAACATAGAGTGCCTGAGCATGTTTCAGATGCCTGTCTTCTTAAAAGACACTAATCTCATGATGTAAAAAATGCCCTTGGCACACTAGTGCGTGAGCATGTTTCAGATAAGCATGTTCTTAGAATACACTTATCACACGACAAGTATGCCACACAATAGTAAGAAATGCCTTTGGCACACTAGACTCTTGAAGAAGTACATAGAAAATACAACTTTGTAAGATCTACAAATCTACCACGGTTTATGTGTTCACGATGTAGTGAACTTATACACTATAGTATGCCAACGATACTCCTTACATCGTAAGTAAAAAGTTTGTTAAAAATATAAAAGCATTTAAAACATGCTTACAGCATTCTATTTATATCCTATCCAAACTCATTCACTTTGTAGGCTAATTTTACCTATATCAGAATATGCTATATCTCCGGCTATTACATAAGATTTATTTTGATATTTAAAAGCCAG # Questionable array : NO Score: 5.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCTGAACCGTGTGGGTTAAGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 591414-592100 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 591414 28 100.0 38 ............................ TAACAAAAGCAGAATCATAGGGCTTCCAGCGAACCCTG 591480 28 100.0 38 ............................ TATAAGTATGAAGCGTATGAATATATTATACCTGATAC 591546 28 100.0 39 ............................ TAGTCTCTTCCTCTTGTTGTTTGAAGCTGATTGAAGCCA 591613 28 100.0 38 ............................ TGAATACAGAGTTTGGGTTGCTAAGGATTTGCTTTCGG 591679 28 100.0 38 ............................ GTATTGACCTGGATTCTTTTCAAATGTGGTGAGTATGG 591745 28 100.0 38 ............................ GTGCTTTCTTGGATCCAATGTTACTTCAAAATTAAATT 591811 28 100.0 37 ............................ GTATAGTAATTCTTCAGAGTTTGAAATTTTCTCTGAC 591876 28 100.0 38 ............................ GTTCAATTTTTGGTGTAGTTACTGATGCTTTAAACTTT 591942 28 100.0 38 ............................ GTCGCTTTGTGATTTTTGTATTCCTGCGATATCTCCAT 592008 28 100.0 37 ............................ GGATTTTGGATCTGATGTATGGCAATTTATAGATCAG 592073 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 11 28 100.0 38 GTTTCATCTGAACCGTGTGGGATATAAA # Left flank : TGTTATAATTTTTTTGTATGTATGTGTTCACGATGTAGTGAACTTGTACAACTTATACAATTCGGATTAAAATATGCTATAATATTTACATAGCCATTAGGGCTTATTGAGCTTCTTAAGTTTTTCTTAAGAGCTGGCCGTACTTCAATAGCTGAATAAGTGTAGAGAGTTTTTACATACTTTTGATAACCCCACGGCATTTTTAACTTTTTTAATTAGGGGTTTTAGTGAATTGTTTATACAAAAATAAGTTTTATTATCCTTCCAACTTATTGTCTGACAAGCAATTAATTTTGCCGTAAAACCGTAATTACATAAAACCGTAAAACCGTAATTACGGCAAATTTGTCAAAGGCTTGTTAGACAATGATTTAAACTTGATAACGGTACACTAAACTTTGCAGAATCTGGCATTTTCGGAAAATTACCTTCATTTGCGAGGGGTACCCCCTTGACGAAACCATTGATACACTATATAATTTTAGGAGTAGTGATTTCTG # Right flank : ATTATATATACCTCCCAAACTTGCGTTTATATTTAAAATACTACAACACAATTAACTTGACAATGCTTTTTATAAGTTCAATATATCGTGAACACATAAACCTTGCTTATAAAACGTGGCATGCTCGTCATATGATAAGTATTTGTTAAAAAGATAGGTATCTGAAAAGTGGTAAACCACTCTGCATTCATAGTCTATCTGAACTTATACATACTGTTTGATTAGCTTTTATGGTTTTTATTATAGTCAAATAAATTATTCACGTTACTATTAGTAAAATGGGGGATCTATAAAATGAGGGTAAGAATAGTGCTTAAAACAGATGAAATGCCACTTTTATATAGGCATAGGATTATATCTTTAATTAAAGAGGCACTTATGAGGTCCGATAAGGATTATAAGGAATTTTTGTACGATGGTAAGATAACAAAACCCTTTACCTTTAGCTTGATGTTTCCTAGAACAAAAGAATTTGTAAATAAAAAGGTTATTATAAATAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCTGAACCGTGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 4 929268-928122 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 929267 29 100.0 35 ............................. TTGGCATCTACAAATTTAAACTGTATCTTTGGAAG 929203 29 100.0 38 ............................. CCTCTATCAGGCTTGAAATCTTCATTTTTTAATATCGC 929136 29 100.0 36 ............................. TTTTACAATATTGACTCTAATCTATAAAAATGATAT 929071 29 100.0 42 ............................. CCATATCATAAAAAAATACTCTATTTCTTGATACAAATCATA 929000 29 100.0 36 ............................. TTAAATTAGGGAATGGTGTTTGAAATTCAAAACTTG 928935 29 100.0 37 ............................. TCCAGAGTTTATGCTTTGGTGTAGAGTGTATAAGTGT 928869 29 100.0 36 ............................. TCTTGTATATCAAATGCAAACAATCCTAATGATTCT 928804 29 100.0 37 ............................. GCTTGTTCTAAGAGTTTGAAAATCCTAATCCACAGCT 928738 29 100.0 37 ............................. ATCATGGACGCTGCGATTGAACTACTTGCTTACAACG 928672 29 100.0 35 ............................. CCTTTTAAGATTTTCTTCATTTTCTTTTCTCGCAA 928608 29 100.0 37 ............................. ATGGCTTGGCATATTAGACCCTGTCAAACTAAACACA 928542 29 100.0 34 ............................. ACACATTTTAGCGTCACAGACAATGATGGACTGA 928479 29 100.0 38 ............................. TACTTCTTTTACATTGTTAATGTTCCTTTCAACAAAGT 928412 29 100.0 37 ............................. AGTCAATCAAGCAGTGCAAGACTTTATAAATTGGACT 928346 29 100.0 37 ............................. CTATCTACTACGCTAAATCTTTAACGTGGGATGGACA 928280 29 100.0 36 ............................. CTTTACGAAAGATTGAAGCCAAAGAGAAAGAAATTT 928215 29 100.0 36 ............................. TTGCTTTAAATGTGTTGTGGAAGGTGTGTAATAATA 928150 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ========================================== ================== 18 29 99.8 37 GTTTCATCTGAACCGTGTGGGTTAAGAAG # Left flank : TGTCTTATAACATGTCTCTGTTAAAAAGACAGGCATATAAGACGTGCTCACTCAACTTATACACCTTCGGATTAAAATATGTTATACTATCTACATTGGGGCTTATTGAGCCTCTTAAGTTTTTCTTAAGAGCTGGCCGTACTTCAATAGCTGAATATGTGTAGAGAGTTTTTACATACTTTTGATAACCCCCACGGCATTTTTAACTTTTTTAGTTAGGGGTTTTAGTGGATTGTTTATACAAAAATAAGTTTTATTAGCCTTCCAACTTATTGTCTAACAAGCGATTAATTTTGCCGTAAAACCGTAAGTACATAAAACCATAAAACCGTAATTACGGCGAATTTGTAAAAAGCTTGTTAGACAATGATTTAAACTTGATAACGGTACACTAAACTTTGCAGAATCTGGCATTTTCGGAAAATTACCTTCATTTGCGAGGGGTACCCCCTTGACAAAACCATTGATACACTATATAATATTAGGAGTAGTGATTTCTG # Right flank : AAGAAAACGTATCCTTTAAATACTGTATGAGTTCAGATAGAGTGTGAGCGCACACCTTGTTAAAAGTATGTGTTCACGATGTAGTAAACTTGTGCATTGATATTGACTTTTACTTTATATATGGTATAATAATAGGCTATTAAGTTTTATAAAATGGAGGCAATATGGATAGCGTGAAGACTATAAGGCCAAAACCACAGGATATTAAAAGAGAGTATTGGATAATAGACGCTAAGGATATGGTGTTAGGAAGACTTGCAGCTAAATGCGCCAGCATCTTAAGGGGTAAGCACAAGCCTATATATCAACCAGATGTAGATTGTGGTGATTTTGTAATAGTTATAAACTCTAAACTGGTAAAAACCACAGGTAATAAGCTAAGAGATAAAGTCTATAAGTTTCATACAAACCATCCAGGCGGTCTCAAAGAGAAGTCTCTTGGTTTCATGTTGGAAACCAATCCAAACCAAGTTATTATGTTGGCGGTAAAGAGGATGCTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCTGAACCGTGTGGGTTAAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 5 930862-931286 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 930862 29 100.0 36 ............................. TGATTATGAGTTATTGACAAATGATACGGTACAATG 930927 29 100.0 37 ............................. TTTTGGTGTGTTTTATAAAGCCAACAAGAACGATAAA 930993 29 100.0 39 ............................. TGTGTAAGAGTGTAGGATAATGATGCCCAATCATATGAT 931061 29 96.6 37 ............A................ GAATTGAAAAAGGTACCACACAAGTGGTACCTCATTG 931127 29 100.0 36 ............................. AAGAGGATAACTCTTTCCAGCAATCCACACTACCGT 931192 29 100.0 37 ............................. TCTTACCTACTATTTGACCTTCATACATAATAAAGCG 931258 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 7 29 99.5 37 CTTCTTAACCCACACGGTTCAGATGAAAC # Left flank : CGATTTAAATCTATAAGTATATAGTTTAGCTTAGATGCGTATTTTTCTAATTTGGTATTTTTAACAATAGGTAAAGATGTGGGTACGTTCCATTCACCTTTTCCATGATAAAAAACAATGTTGATAATAGGAGGGTAATAATCTTTTTCTTTTATAGCTTCTTCCCAGATAGCGGCGTTGTAGTATAGAAGCTGAATAGGTAATTCTTTATCAAGATAAGATTTGTGTTCAAGTACAATCCTTATATAAGCATCTTGATCTTCTACCTTGCAGCTAAAAAGTAAATCAAGCATAAACTTTTGAGATTTAGAAGAAAACTTTTCTGTATTAACAGGTGTTATAGAGTGTATCTCTTGCCCTATATCTTTAGCAAAGATATCAAGAAGCAATTTTACCCTCTTAGGGTCAGAAAATATCTGCTTAAAAAATGAATCATGGGGCTGTATATCCATAGATCTATTTTACTACAAATTAAAAGTATTTAGAGGATACGTTTTCTT # Right flank : CAACAAGCCTTTTACAAATTTGCCGTAATTACGGTTTTGCGGTTTTATGTAATTACGGCTTTACGGTTTTACGGTAAAATTAATTGATTGTCAGACAATAAGCTGGAAGGCTAATAAAACTTATTTTTGTATAAACAATCTAATAAAACCCCTAACTAAAAAAGTTAAAAATGCCGTGGGGGTTATCAAAAGTATGTAAAAACTCTCTACACATATTCAGCTATTGAAGTACGGCCAGCTCTTAAGAAAAACTTAAGAAGCTCAATAAGCCCCAATGTAGATAGTATAACATATTTTAATCCGAAGGTGTATAAGTTGAGTGAGCACCTATAAAGACAAGTATGCCACGATTCACAAGTCTGCCACACCCTACAAGTCTGCCACACCCTACAAGTCTGCCACACCCTACAAGTATGCCACGGTTTGGTACCTATACTTCCCTTCATGGTACCCACCACACTTAACTCCTTGTAAAATTTTAAGGAATATTTTAACAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCTTAACCCACACGGTTCAGATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.80,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 6 1024542-1024045 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1024541 30 100.0 38 .............................. AGTTTGTTTTTTATCACAAAGCCCCAATTTTTAATCTT 1024473 30 100.0 37 .............................. TCCATAATCGGCACTTTATTAGTTTTGATGTCAATGT 1024406 30 96.7 37 ...............G.............. AATGATACCACACAAGAAAGCGACACACAAGAAGGAA 1024339 30 100.0 34 .............................. TATTTTAATATTTGATTCATTATTTCCCTAATTT 1024275 30 100.0 39 .............................. TTTGATTAAAGAGTTTGACTTTACACCATCATTGTTTAA 1024206 30 96.7 36 ......C....................... TCCTCCTCGAATATCGGCGTGACGCCGACTTGAAGA 1024140 30 96.7 36 ......C....................... AATCTTCTATATCGTCTAATATACGCTCTATCAATA 1024074 30 86.7 0 .........................T.CTT | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 97.1 37 GTTTTGTTTGTACCTATAGGGGATTGAAAC # Left flank : GACACCTGCGCTGGGGAGTTTAGGGCTTATACGCCTTATTATTACTCCTCTTGGGAATATCCATACTATAAAATCGGGCAAGAAGAAGCTATTTTTGACAACGACTAAATTTTGCATAAGTCCAAAAACTACTGCCAAAGATAGACATAAATAAACCATCTCATAAAGATTTTATTTCCTAATTTTATTTTCTAAAAGCCTAAAAATGTTAATATAATTTCTAAATTATTAACATCAAAATCCCCAAAATCATTGTCTATCAACGATCTGTCGATCGGCAAAAAATTATTAAAAAACGCCTTGTTTTCAAACAAAAAAATACCTCATTTTTGGCATCTCAGCTATATCTGACAAAGAATTGTCGATCTCCTATGATTTTGCTCCTATTGACGATCGACGGGAAATATGTTATATTATAAGCTGTTGATAGGTTGATGGGGTACCTCAAAAACCTTGCCGGCGAAGGGTTTTAGGGTAGTTCACAATTTTTTCATTTTGGT # Right flank : TTGTAAATAATGTTAGTAGTAGCAATTTCTGGTTTCATCTGAGCCGTCTGGGTTAAGAAGCTGTGAAATCATATCCTTTAAATACTTTTGATTTGTAGTAAAATAGATCTATGGATATACAACCTCACGATACATTTTTCAAGCAGATATTTTCAGATCCCAAAAGATTAAAGATGCTTCTTGATATCTTTGCAGAGGATATAGCACAGGATATACATTCTATAACACCCGTTAATACAGAAAAGTTTTCTTCTAAATCTCAAAAGTTCATGCTTGATTTACTTTTTAGCTGCAAAGTAGAAGATCAAGATGCATATATACGGGTAGTACTTGAGCACAAATCTTATCTTGATAAAGAACTACCTATTCAGCTTTCATACTACAACAGTGCTATCTGGGAAGAAGCCATAAAAGAAAAAGAGTATTACCCTCCTATTATCAACATCGTTTTTTATCATGGAAAAGGTGAATGGAATATGCCAACATGTTTACCTATTGTT # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTTTGTACCTATAGGGGATTGAAAC # Alternate repeat : GTTTTGCTTGTACCTATAGGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 7 1088919-1092251 **** Predicted by CRISPRDetect 2.4 *** >NC_020814.1 Hydrogenobaculum sp. SN, complete sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 1088919 29 100.0 39 ............................. ACTTATGCAAAAGTATCTATTACATTAGAACTATCAAAC 1088987 29 100.0 40 ............................. CCTGACAAAAATGAGAGCATAACACTTCCTACTTTTGCAA 1089056 29 100.0 36 ............................. TTATCACACGTGCAAGTGTTTTGTGTTTTGATATGA 1089121 29 100.0 35 ............................. TTGTCTCGTAACATTAAAATTCGTTGGAGTTGTAT 1089185 29 100.0 38 ............................. TCTTCAAAGCATACGTCAATAGTCTGCCAGCTTTGAGA 1089252 29 100.0 37 ............................. CTAAATTTTGAAAGTGTGGAGGATATGAAATCTTTTT 1089318 29 100.0 37 ............................. ATTTCTTGAGATAATTTGATGATAGAAATATTTTTCT 1089384 29 100.0 36 ............................. GTTAAAGAATCGTTTGAAAAACAGCAAATAGCAGAA 1089449 29 100.0 35 ............................. ATCTCCTACAGCACTCCATTGATAATATGTTATTT 1089513 29 100.0 36 ............................. TTTGCAGTTAGCTTCTTCAATAGATTGATGTTTATA 1089578 29 100.0 36 ............................. TTACAAGTTTGTAAAACATCTCTTAAAAGCTTGTTT 1089643 29 100.0 38 ............................. TCGCACAGCTAAACAGCAACAGACTACTTGCTAAAATA 1089710 29 100.0 39 ............................. AACTCAACATCATGCAAATCTGGGACTGCTTCTTTTTGC 1089778 29 100.0 40 ............................. CCAAAATATACTTGATAAAAACGATAAACAAGCACATTCG 1089847 29 100.0 37 ............................. TTATCTCATCTTTTTGTAGGTATCTCAATACTCCTTG 1089913 29 100.0 38 ............................. TTTTTTAGCATCACTTTTTAACGATGCATTAGGTTTAA 1089980 29 100.0 36 ............................. TTGTTGGATAAGTGATTTTTACTTTGTACTTCATGG 1090045 29 100.0 37 ............................. GAAGCTGTCAATCTAAACACTACTTTGTAATTATTTG 1090111 29 100.0 36 ............................. TTTTGCATCAAGCGTATCAGGAACCAAAACTTTCGC 1090176 29 100.0 39 ............................. GCACTTGCAAGTGCCACTTTGCGAGCCAATGCGAATAGA 1090244 29 100.0 36 ............................. TTTAAAATGGCGGAAAGTTCTTGCGATCTGTCTAGT 1090309 29 100.0 37 ............................. ATTAGAGCTTTGTCTTTTTTCAAGAAAGACTCTATTC 1090375 29 100.0 36 ............................. TTCCTTGGCGCTCTTTCTACTCTTGATATCACAGAA 1090440 29 100.0 37 ............................. TTTAGAAGAGCTTCAAGATTAAGTTGCTTTTCCATCT 1090506 29 100.0 36 ............................. AAATAGCAGCCCAGCTCCAACCCCACTGTCTTTCAG 1090571 29 100.0 36 ............................. ATGTCAACATGTATTGGTCAAAAGCTGAAGGAAGGC 1090636 29 100.0 37 ............................. TGAGCCATATTCTCAGAGATTGGCTGGTGTAATAGCA 1090702 29 100.0 36 ............................. GACGGTGTGCGTGGTCTTACGGGGGATGTCATTTTA 1090767 29 100.0 38 ............................. GACAAAGACTTGATTGAAGATTTGCACTCAGTCAAAAA 1090834 29 100.0 37 ............................. CGTTGAGTTGTGAGTATCACTTTGATATTTTGCATGA 1090900 29 100.0 36 ............................. TATTCTATTTGCAATCTCTTCAGGCTTGAGGGCTCT 1090965 29 100.0 36 ............................. CTTAATCACTTCAAGCCGCAGATGTGTATCTCCTTG 1091030 29 100.0 36 ............................. TAGAGCATTTGCACTCATAGATGCTCCAGTAGGACT 1091095 29 100.0 37 ............................. TAAGTTTTTGCTTAAAACTTCTTCTAAAGAAGCTGCA 1091161 29 100.0 36 ............................. AACACAGACGCAAACCTTTTAAACGCAAACGGTGTA 1091226 29 100.0 42 ............................. ACGTTTTTCACACGACCTAACGCATCTATGTGTTTCATCTGA 1091297 29 100.0 37 ............................. ACAATTGCTGAAAAAGTGGACGATGACAAGAAGAAGA 1091363 29 100.0 36 ............................. GAAGTAAACAAAGCTCTGTTGCTTCTGGCGGCTTCT 1091428 29 100.0 36 ............................. CTACCAATCGCATCTACGCCTATCACCTTCCAACCA 1091493 29 100.0 37 ............................. TTGATTACAAACATTATCAACGCACTTGTAAAACAAA 1091559 29 100.0 37 ............................. GAGTAAGCGTTTTTTTAACAGAATGGAGGTCTTCTAT 1091625 29 100.0 37 ............................. TAGAGCATTTGCATTAATAGATGCTCCTGTGGGACTT 1091691 29 100.0 37 ............................. GCGTTTGAAAATAGTATTTCTTTTGTGTAAAAATAGG 1091757 29 100.0 36 ............................. TTTAAAATGGCGGAAAGTTCTTGCGATCTGTCTAGT 1091822 29 100.0 37 ............................. ATTAGAGCTTTGTCTTTTTTCAAGAAAGACTCTATTC 1091888 29 100.0 41 ............................. ATATGATACTTTTAGCACTTGCCCGAGCCAGTAGCTAATGG 1091958 29 100.0 36 ............................. ATTACTGAAAAATTGCAACAATTATTAAACTACATG 1092023 29 100.0 39 ............................. CTTCTAAGGTTTGATGTAGTCTTTCAATCATTTGAGGCA 1092091 29 100.0 36 ............................. AGCATCGGGGCGTTTATAAATACCGATGCAAAAACT 1092156 29 100.0 38 ............................. ACAACAAGCGTTTGATAAACGTTAGCGGGAGTTGTTGA 1092223 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================== ================== 51 29 100.0 37 GTTTCTAATTAACCGTGTGGAGTTGAAAG # Left flank : ATAAATAACTTCAATGATTAAGGGCTTTATAAAAGCCCTGTGAACTTCAACAGCTGAATATGGCGTTAGAGTTTCTAATGAAGATATTCTTCCGCTTTAACAACTCCGCCGTATTTTTCTTTATATTCTTCTAACTCATTTAGCTTTTGGACTATCAGATCTCCCATAGATATTTTCTTGGTTATAGCCTCTATGCGCAAAGCCCGGTGAACATCGGAAGGTAATAAAACTGTTGTTTTAACCAATTTCTTGCCTTTTTTCCTCATAGATTTAAATATATAATCTTGCCGTAAAACCGCAATGCCGTAATTACATAAAACCGTAAAACCGTAATTACGGCGAATTTGTCAAAGGCTTGTTAGACAATGATTTAAACTTGATAGTGGTACACTAAACTTTGCAGAATCTGGCATTTTCGGGAAATTACCTTCATTTGCGATGGGTACCCCCTTGACAAAACCATTGATACACTATATAATTTTAAATATAGTGATTTCTGG # Right flank : GTTTCATTCTACTTTGTAATAAAGGGTTATCTCTTTGTTGTCCCTTATGATTTTTACGCTGAAGCTTTGGCTGTTTCTTAATGTACCTAATATTCTAAAAGCATCTTCTGGAGAGTTTAGGCTTTCGTTGTTTATAGAAAGAAGTATATCACCTGGTTTTATACCCATCTGGGCAAAAAGCGATCCTGGTTTTACGCTTTTAAACATAAAACCTTTTGGAGTAGGTACAAGGTCTATATCGCTAAACATCTTGTAGGGGTTTGATGTAATTTCAAGAAGCTCGTTTCTATTTACTGTATAAGTATTTTGATTTAAACTACCGCTTAAAAGCTCTTTCAAAGAAGGAAGACCGCTTGGTGTATTGGCACTGTTTATCTTAGCACCTTTTGAAAGTTTTAGAGTAAGGGTTTTGCCGTCGTTGCTTGCTATTATATAAAAAGGTTTTATCTCTTCTATTGTAAAACCGCAAAAACTATCTCCTACCATAAGCACTTTTTTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTAATTAACCGTGTGGAGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //