Array 1 18716-18350 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJFPA010000011.1 Holdemanella porci strain S001_GLD047 Hbiforme_S001_GLD047_0010, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     18715	    36	 100.0	    30	....................................	TTTTTGAAATATCAACCCATCCAATCGCCA	
     18649	    36	 100.0	    30	....................................	ATCACACCTTGAACTTTATACCAAATACCA	
     18583	    36	 100.0	    30	....................................	GATGAGGTTGCAAAACTGAAGTATATAGAA	
     18517	    36	 100.0	    30	....................................	GGTTATACATCACCTGAAGACTTGCAGACA	
     18451	    36	  88.9	    30	..C...........AAG...................	CCTGGGAAAAAGAATATCAAGTATGGGTTG	
     18385	    36	  77.8	     0	..............AAG.............T.TCGT	|                             	
==========	======	======	======	====================================	==============================	==================
         6	    36	  94.4	    30	GTTTTGTTACCATATGAATTTTTGCTAGAACAGAAC	                              	       

# Left flank :   AAACAATTGATAAAAATGTTGTCACCATATTATGAAGACGAATTACAAAAAGATGAATTTGATCTGACGAGAGATGAATTGATTTTGTTTCAATTGGATTTAGTTGAATATATTTCCAATCATAATTCAAAATATGATAATGTCTTTGTCTTTGGCAAACTAGATAATTTAAGTGATAAAATTCTTCAGAAAATCAATAAAATTGAGAATGTTAAATTGATGATTTTTACAAATTATTACAATAATTTAATGAATGTACAAAACACATCTTTATTGCAAGATAAAATAATAGATTTAGCAGACATGGAACAAATTTATTACGACCTATCACAAAAATCACTTCAAACATATACGTTACAGGAGGTAGAACAAATGACAATTGATTATTTACAACAAATATACACTCATAAAACACACGATATTTATCAAGAACTAGATCATTTTTCAATTAAATAATTAGTATTCTATTACATTCAAAAATGTGCTACCATATTTTTGAG
# Right flank :  TTATTTCTCTTGTGTGACATTGACTACCGCATACTCACATATACCCTCTGTTCTCATTGTAAAACCCCAACCAACAAGGCCTGAGCTAATGATTTTTGTTTGTGTAGTCTTTTCTGCCGATTAGAGTTATGTTGTTTAAATGTACTTCTTGATCATTTAGAATGATAATATTGTTTTTAGTGATTTTGTGATTGAGTTTATTTCTTGTGAATTTTGTTTTGCTTTTATGATTGCCATATACAAAATAAACAGGGGATACTTTAGTAAGTCTTCCAATTTGTTTAAATAGGATTTCCATATCTTCTTTTGATGTGGATTCATCCACGAAGTCTTTGCTAAGTATATAGAAATTTGGCTTTACTTTTAATAATGTATTTGTGATTTCTTTTGTTGTTGTGATGTTGTAGGTGGACATATTCACAGAACCAAAAGTTACGATGTGGATATGATAGCTGAAAGAAGTATGCAGATGATTGGTTTTCTTTTCTTGAATACGATTA

# Questionable array : NO	 Score: 5.98
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGTTACCATATGAATTTTTGCTAGAACAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [12-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.18   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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