Array 1 1-244 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE384342.1 Maridesulfovibrio zosterae DSM 11974 H589DRAFT_scaffold00001.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 1 36 100.0 33 .................................... CACTCTCACCCATGTCTTTGAATCCGCCTTGGA 70 36 100.0 33 .................................... CAACGAGAAGGAGTCCATCGAACTGGATAGTCC 139 36 100.0 34 .................................... TTGTTTCTGTTGACTGGTAGGCGATGGATTTTTA 209 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 4 36 100.0 37 GTTGAACGATTCTGCGTAATGACAGCAGATTGAAAC # Left flank : | # Right flank : CAGTGGATCTCTGGTGGGAGAAGTCTGTAATGCTTTAGATGGTCCCCCCTCAGAGCCCATCTGGGGTAGTCGTTACATCGCCATAGCCAGCGGCAGTGCTCCTGCCTTCATGGATTTTGCCATTTTGATGGTCTGGGACATTTGTTTCTGCACTTCACCGATTCCGCGCGATTTGTGAAGATCATTGAAGTCGGAGAGACCTTGCTCTTTTTCGGCTTCATTGAACTTGGGCGTTGCCATCAGACCGCCTACTGCCTTGGATGCTGCTTCGGCTTTTTCTATCCCGACATTCTTTTCAAGATGATGATCGTTGTCACTGACCAGCACTATGGAGCTTTTGGGATATTTGGCCTTCAGGGCTTTAGCGACCGGCTCAAGATTGGAAGAATCAAAAGCCACTACTGTGGGCATGTTGCTTGCCATATATGCGCTTGCCGCAGTGGCGTAACCTTCGGCAACGAGGATCGGTCCTCCTTTGGCTATGTTTTCGCCGGGATCAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACGATTCTGCGTAATGACAGCAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 85377-85757 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDC01000019.1 Maridesulfovibrio zosterae DSM 11974 H589DRAFT_scaffold00009.9_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 85377 36 100.0 33 .................................... ATTTAAACAGTCGAGTTGCAGTTCCAGGATCAT 85446 36 100.0 32 .................................... AAAAGAAAAATACGCTTTTTCACGATGAACCT 85514 36 100.0 34 .................................... GCTCCCCGGAAGGCCCTAGGGTGTTCTCCTTCTG 85584 36 100.0 33 .................................... CCTTCATTTTTAAGCCCTTCAAGATAATCTTCA 85653 36 100.0 33 .................................... ACATTATATGCGGCAATATCCCCCATTTTTCCA 85722 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 100.0 33 GTTGAATGATTCTGCGTAATGACAGCAGATTGAAAC # Left flank : AACCGGACCGTGCTGTTGTGCTTATCGACTTGAAGAATATTTTTAAGATCCGGGATGTTTGAGTTCAGATGGAACATCACGAAAAGGGCCGTTACAGTTATCGCCAGAAGAACAAAGGTTTTTATAATGTTGAACATAGGTGCCTCCTTAATATATGGTTTTGAGGAAATTATTTCAGAGTCTGAACAAGGAAAACAGCGGTGTAAAATTACAGGCTGATTGCGGGAAAAAGGATTCTTTCGGCGTTGGCCGGGATTTGATTTTGGAATGATTGGGGAAAGTTAATTTTTTGCTGATTGCAGTTTTGCGGGGGGTATTATTTTAATTCTATTCGACAGTTTTTGCATAACACGCTGAAAAATCAATAAAAATAATGGAGTGTGATTCTTGGCTTTGTTGTGCGTTTTGTGTGAACGGTAAGTTAATTGGTGCTACTTGAAATGAGTGAAAAATGGGGGTATATAAGTTACTAGTTTAATGGGGGATAAAAAATGGTACCC # Right flank : CAAAAAAATCCGCCTGAAAATTCAGGCGGATTTTTTTGTACCTATTTTTTTAGCTGATCAAATCATAATTATTTTTGCATGTTTAAGGAATACCAATACTCATAGTTACCACCGGCAAAATGATACACATGGGTCAACATCCGGTTGGCCAAGAGTGAGCCTATATGTGCGTTGATTGTCACTGGTCCGCCATAGAAGAGATAGAGAACATCTGGGGATTGGTTTTCCAGTTCCTGATATTTGATTTCTAAATCAGATAAAATGTTGGGAACATCTTTTTGCGCTATATGACGACCTTTATCCCAGTTGTAGTGAAAAATCATTACGTCATCTAGATCATCAAGTGCCATTTGTTCTCTATTCGTTTCAAAAGAGTTGGATAGATTACTTTGGGGGAGGAGATCAATAATCAGGGCTGCCTTATGTTTACCATTATTTGTTTTTGCCATTTGCAGACTTCGTCTCATTCTGGCCCGGCGTCCATATATAAATTCGTATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATGATTCTGCGTAATGACAGCAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.20,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 2 98226-98465 **** Predicted by CRISPRDetect 2.4 *** >NZ_AUDC01000019.1 Maridesulfovibrio zosterae DSM 11974 H589DRAFT_scaffold00009.9_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================== ================== 98226 35 100.0 34 ................................... CTCCCCTTATTTTCTATTTTATGTTTTTATTCTT 98295 35 97.1 32 .......T........................... CATAACAATAAGTCCTATAAAGATATGCATAC 98362 35 97.1 34 .......T........................... CTTGAAAAATTCATTTCTCCAGGAATTTTTTTTA 98431 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ================================== ================== 4 35 98.5 34 GTTGAACGATTCCGCATAATGACAGCGGATTGAAA # Left flank : AGCTGGCGACATCTGCATTTTCTGTTTTTGGAACGGAATCCGTACCAGTTACGGATAGCACAAAAAAAGGAAAAAGGCCCAGCAGGTTTTATATCCCAAATCGCAGAAGTGTCGTCTTCAAGAATTTGCTTTCAGGATATAGCCCAGAGCCAATAAGATTTGATTAGTTTTGCTTCTCGTGTTGTCTGTTACTATCCCCTGAGCATTTCCCGTGCTCAGGGCTTTTTGTATTTATCAGATTTTATTTGGGAATGTTAATTTTTTGCCGATTGCAGTTTTTCGAAGCTTGTGATTTTCATTATATGTGATGCTTTTTTTAGTAAGGTCTTGAAAATAAAGTAAAAGATATTGGTCGCGAAATGCGAGTTTGTGGTGTGCTTCATGTGACCAGTAAGTTAATTTGTGTTACTTGAAATGAGTGAAAAATGGGGGTATATAAGGTATTAGTTTAACTGGGTATAAAAAACGGTACCCGTTGAACGATTCCGCATACGGTACCC # Right flank : ATGAAAAAGCCGTCTTGAAATTTCAGGGCGGCTTTCGTTTAGCGAATCTTTTTTCCAAGAAAGATAAACTGCTTGTCGGGCGGGACTATGCGTGTCTTTTGTGGGTGAAGTTCCAAACCCATCTTTTGCAACAATTTATCCACGTATTTGCGGGCTTTGATCGTTTCTTTTTCAGAGATGGTGAAGATGACGAAATCGTCTGCAAAGCGCACGAATGGCAGGTTCCTTGCCGAAAGGCTATTGTCAAATGGAGTCAGGAAGATGTTGCAAAGCAGCGGCGAGATGATGCTGCCCTGCGGGATCCCACGGCGTTGCTGGAAGATGCCTGTGCGCGGTGTTCCGGTTTTGATCCAGTCGAAAATCAGCGATTGGACATGACCGTGCGTTACATATTTTTTCACGGTCTTTTTCAATTGACGATGCGGAATTGAATCAAAGAATTTTGTTATATCCGCATCCAATGCCCAATTCATTCCGCATTTTATGAACTCTTGGGTTTT # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACGATTCCGCATAATGACAGCGGATTGAAA # Alternate repeat : GTTGAACTATTCCGCATAATGACAGCGGATTGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.90,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA //