Array 1 3673507-3673352 **** Predicted by CRISPRDetect 2.4 *** >NC_012917.1 Pectobacterium carotovorum subsp. carotovorum PC1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================== =============================================== ================== 3673506 22 95.5 42 .......C.............. AGAGGAAGAAGATGAGGAAGATGAAGAGTCTTAATCCCTTAA 3673442 22 100.0 47 ...................... ACTAAACGTACTGGTTACAAGCGTAAGTCTAAGTCTTAATCCCTTCG 3673373 22 95.5 0 ........A............. | ========== ====== ====== ====== ====================== =============================================== ================== 3 22 97.0 45 GTCAGGGAGCGTCCGTAAGGAC # Left flank : CATCAGCGAATCGACTCCCAGCGGAGCCAATGGGCTGTAACAGCGCACTGCGGGAACCGCGTGGGGATCGTCCACTAACAGGTGGGTCAGTGGTATTAGGTTGGTTTTGTCATTATTTGTAGGAATACCCTGCTCTCCGCGCGCCAGTCTGGCGGCGAAATCCAATAGCAGGGTTAATGTATTTTCGTGCAGATCCGCACGGGCCGAGAGGCTTTCCGGCAGCGGCGCAAACAATTTTTCGGCCAGTGCTGGTGACAGGAAGTCCTGAATGCCGGCATGCAGCGCCAGTGATTTCAGGTTATGTAACAGCGCAAAGGCGGCCACATGGCAAGAGGCGGCAAGCCAGTTCATTGACATCTCCTTGTGCCAAAATAGGGCGCGCCATATAGCCCGCCCGTAACGGGCTTAACCATACGAAATTCCAGCCGAAATGCCTATCAACGGATAAGAAAAATTTGATAGTGGGCGGAAAACCGCCCAGAGGAAAACAAATCCCTTCA # Right flank : TAATGAAAATGTATAACCCATTGTTTTTGTTTCATCAAGCCAGCCGATATTTTTCTCGCCGCAAAAAACACGGTTTTAGGCAAAATGGTGCCAAGGTAAACGTCGGCACGCTAACGGCTTGTTATGATGCGCGTTGTAATCGGCATCTTTCCTCTCTATTACACACAGAGAAGGCGATATCACCCAGAATATTATCCTGCCGGATAGCAGCTATTTTTTAACCGGAAAGTGACGGTAAAAAGATCATTTCACTGCCTTAGATGATAGTTTTTGTTATGAAATGACGCCCTAAAACATCCTTTAGTTAGTCGTGCTGATTTTTTGTTTTTTTATAGTATAAAAACCTTTTAATTTTAATTAAATAATAAATGATTGCTAAATTATCTAATATTTATTTCTTAATTTAAAAATAATTACCTAAAGTTACATAGGTGTTTATTCTGTCAAAAGTAAAAAATAGAGGGTAAATATTTTCACTAAATTAAAATTAATGAGCTTTT # Questionable array : NO Score: 5.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:-0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGGGAGCGTCCGTAAGGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 3681990-3682375 **** Predicted by CRISPRDetect 2.4 *** >NC_012917.1 Pectobacterium carotovorum subsp. carotovorum PC1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 3681990 37 100.0 33 ..................................... TCGAAGCCTTTGCCTTCAGCGTAGTATGCCATG 3682060 37 100.0 32 ..................................... TTTCAAGAGCATTTCTTTGCGATGTAATTAGT 3682129 37 97.3 33 ..........G.......................... ACGTTATCCGCATACAGATCGAACTCCATCATG 3682199 37 100.0 33 ..................................... TGATACATCACGTATGAAGCCAGATCGAAAATC 3682269 37 97.3 33 .....................T............... TTAAACTGAATAGGGATTTCTTTTAGCTTTTTA 3682339 37 83.8 0 ............A...................TCCTG | ========== ====== ====== ====== ===================================== ================================= ================== 6 37 96.4 33 GTCCTTACGGACGCTCCCTGACTGAAGGGATTAAGAC # Left flank : ATAATACTTATGAAATAACTTTCATTCACATCGCCCATGGTTCCATTATGTGTAATGGTTCGGGATAAATTTAATTGGGAAGCCAATAGTTTTTGCTGTAAATCAAAGGAGTTTTTTAAAAACTCTCTGCCATTAATGTTAGATAATTCTTTTGCCTGACTCGTCATATTCCCTTCCTGATTTTAACTTTCTGAATATCCACCAGAAGAAAAGTATATCGTTTATCCATAAATATTCCTGCAATACCAGCCTCATTTAGGCACAAATTTTGCTTGTTTTCCCTATTACGCTCGTCGCTCCCCAGAGGGCCTGATTTTCGTACAAAAAACCAGCAAAAATAAAATTATGCCGATAGCAATTCACGTGACATCAAGCCATTAACACCACAACATTTGCACTGGCACCAGTTTTGCTTAAAAACGCATTTTTTTGCGGCGGGAAAAACAGAAAAAGGCAGGCAGGCTTGATCAAACAAAAACAATGGGTTATAAATTTTCATT # Right flank : GCTTTATCTGCCACCACACTACGGTGGCATTTTTAGGGTATGACCCGACTCAATCGCCGTTAATGTTTTTTTCCTGTCGTTGCTGCGTCACATGCCGATAGCACGACGGCCAGAATCGCTCAAGGCGTGACTCAGGCAACACTGGCACAAGCTCTCGGGAAACCACAATCCTTCATTGCCAAAATCGAGAACGGCAAACGCAGGCTGGATGTGGTGGAGTTTGTTCAACTGGTTCGATTGCTGGCGTTTGATCCCGCCCAGGTGCTTAACAGCATCCCTTTCAGGCTTAAGGCGTTGAGTTAACCCCGCATCTCGTTGGTGGATAAACACAAATAACCCGCTCGGCACGATAGCAATTCAAGTCAGTTCACAACACCGGTAAACCCGGTTCAGCACACGGCGATAATAGGAGTCTAACTAAACTATTCATATTATTGTTTTTATTGATTATTTCCTGTTGTATAAATTTCATTTATACACATCGGCGCTTGAGCCCCAAA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTTACGGACGCTCCCTGACTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //