Array 1 2049-704 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWUR010000244.1 Heyndrickxia sporothermodurans strain M5311-1 NODE_244_length_2771_cov_239.697, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 2048 32 100.0 34 ................................ ACGTAATTGCTTTTGCTCTTCTGTCTCAGCTGGG 1982 32 100.0 33 ................................ AATCGCATCAACAGTGATGTCTGTCTCGACTTT 1917 32 100.0 34 ................................ CTTTAAACGTAAAATCCTTTATAACTGTTTACGG 1851 32 100.0 34 ................................ CACAATTCGTTGTCAAGTCGATGATGGATTGAGT 1785 32 100.0 33 ................................ CATCCAGTTTATGAACCTCAAAATCAGCTACAT 1720 32 100.0 33 ................................ TCGTTCTGCAGGCTTTAAAGAACAGGCGAATAC 1655 32 100.0 34 ................................ CGTGATTGTAAGAGTACGAGTATCATCCGTTAAT 1589 32 100.0 34 ................................ AGATGGAGGACAAGGAGGAGATGGCGGTGGGGGA 1523 32 100.0 35 ................................ ATCAATGCTATTGCTAGTAAAGAAGAGAAGAAAAT 1456 32 100.0 33 ................................ ATCATTATTAGGAAAAAGGATTAGTGGTACATA 1391 32 100.0 34 ................................ CTAGTTCGCCATCGAGATCATCCACTGCATTTAA 1325 32 100.0 33 ................................ TTTCTTCGGTTGGAACCACGTGCTTGTCCTTAT 1260 32 100.0 35 ................................ ATCAATGCTATTGCTAGTAAAGAAGAGAAGAAAAT 1193 32 100.0 33 ................................ TACCCTTACACAGACAGCCAATGGTTTGCAAAC 1128 32 100.0 33 ................................ TAATGGAACAGGCATGACTTTTAATTTATCCGG 1063 32 100.0 33 ................................ CTTGGCTTGATCCATCTGGCGGTCAAATTAAGC 998 32 100.0 33 ................................ TAATGGAACAGGCATGACTTTTAATTTATCCGG 933 32 100.0 34 ................................ CCTGGTTATGCTGATGGTATTGGAGATTTTTTCG 867 32 100.0 34 ................................ TGAAAAAGGTTATAAAGTGATTTTTTCGCAAGAC 801 32 96.9 34 .............................G.. CCAATGTGTATCGGCTCAGAAAAAATGAAAATTG 735 32 87.5 0 ...........CA......T..A......... | ========== ====== ====== ====== ================================ =================================== ================== 21 32 99.3 34 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : TAGATGAATATCCTCCTTTTCTATGGAAGTAGGTGCATTAATTGTTAGTATTAATTACGTATGATGTAAGCACGGTTCATAATGCTGGTCAAAAAAGATTAAGAAAAGTTTCTAAGTTGTGCCAAAATTACGGTCAACGAGTTCAAAACTCGGTGTTTGAATGTGTTGTTGATGCTGCTCAATTTGCTACTTTGAAAATAGAACTGACTAATATCATTGATGAAAATCAGGATAGCCTCAGATTCTATCAACTGGGTAACAATTATAAGAATAAGGTTGAACATATTGGTATAAAGAAATCAATTGATTTAGAAGCGCCATTAATCTTTTAGTGCGGATGTATAGTGCACATAAAATTCCCACTTCATTCGCACCAGATTTTTTAAGCTACATCTCCTAAATTTTAGGATTAATTATATGTGTTCTTTATTTTAATAAAGAAAATAGTGTTTTTTGGATCGAAATAGACTTTTTTTATGTAACTTTGACCAAAAATCGCT # Right flank : AATCTGCAACTCAACTACTTCCATGTTAAGTTGATGACGTCTTATTATGGTTTCTACGAAATTTCTTTAACTTTGACATAGCAAATACATATCAGTCTTGCAGAGCCGTTTTAGGTACTATCTGGTCTATAAAAAGATGCTGATTCCCACATTTAGTATGAAGAGGATTCGTGCTAATCTGTTGCAGGTTAAGCACCTCGAACTGAAAAATAGACGGAAAAACTTCTCTTAATTAGTGTTTAGTATTAAAAAAAGGCTTAAACATACTAACATTAGGTAAGCCCCCATTCAAACAACGCATATAAATGATCAGCACCCCTTAGTACAATAATCGTATCAATTAAGGAGGTGCTTTTCCTATGTCACAACAAAAACTAACAATCGTCCCCGTTTCAATACAACCAGAAAAAAATATTATAACATCCACAACTTCGAAAGATCCTTCAAATAGCTTTTGCACAATCAAAATTGAAGCTGCTGAAATTTCCTTCTTCAACGGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 22692-22872 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWUR010000044.1 Heyndrickxia sporothermodurans strain M5311-1 NODE_44_length_23565_cov_29.4768, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================= ================== 22692 24 100.0 28 ........................ TGAATTAGGATGTACCTCGAACTGGGTC 22744 24 95.8 29 ..T..................... TGACTGAGGGATGTACCTCGAACTAGGTC 22797 24 100.0 28 ........................ CGTCTTGAGATGTACCTCGAACTAGGTC 22849 24 91.7 0 ..T........A............ | ========== ====== ====== ====== ======================== ============================= ================== 4 24 96.9 29 TAAGAGGAACATCTTTTGTTTTTT # Left flank : TGGTGTATCTAGTGGAACAGGAAAAAAGATATAGTCAAATGACTGAATATGAATTGAAGCAAGAAATTGCCACGATAACCGAAAAAGCACGTAAAGCTGAACAGCTCGGGATCGTCAATGAATTTGCTGTATTAGAGAGAAAAGCAATCATGGCAAAAGCGTATTTGCTAAATCCTAAAGATTTTAAACCAGGTGAACTATATGAAATCGAAGGGGATCCTGGTGTTTATTTTAAAATAGATTATATTAATGGTGTATTTGCTTGGGGATATCGCTTAGGTGGTGAAAAGGAAGAGGAAGCATTGCCGATATCGGTGTTGAAGAAGTTAAAATAAAGAAGGTTATGTTAAAGCTCAGTGTTGATGTGGACCCTATGGGAAATAGAACGGGTGCCTATGTTCCTACGGCATAGTACCGTCCGCTTAAAATCGAGTACCATACAACCAATCTTAACAATACCAATTGACAAGATTAAGGAACTTTTAGATGTTCCTCCAATT # Right flank : TTGACTAAATATGTACTTCCAAGTATAAAAGAGACTATTTTTAATGGACAAAACTGAATAATCTAGCCAATATTGTAAATAATAGTACCCCTACCTTTAACTAAGTAGGGGCACATTATGTTGGATTTGATTTTTGTTAATGATTATTGCGTGATTAATGTCTACCTCTAGCGCTTTTCGACTAGAAGCCCAAATTCCTGAAGTCTTTTATTCAATAAGCCGCTTTTCTTAAACGTCACTGTCTCTACGGCTAGATGCTTTCATTCGTTCTTGTGGATGTGTATTTGTTGATCCATCCGCACGTTTTGAAGCAAATTCTGCTTTTGCCCGAGGTTCACCTTCGAACTTATTGTCATTTCCATATGGGAAACCTTTTGCTTTATTGCGCATGCTGTTGCCTCCTAAATATGATATAGAATATCCGTACATTTTTTATTATTGGATAGGAGCGGTGAGCATATGAATGTATGTTCTTTCCTTTTTTTCTTTTTTCGAGTACT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAAGAGGAACATCTTTTGTTTTTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //