Array 1 59800-64973 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMQW010000012.1 Intestinimonas butyriciproducens strain D40t1_170626_B2 NODE_12_length_115140_cov_22.1795, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 59800 33 100.0 36 ................................. ACCTCCTGGGGGCGGCTGCCGTCACTCGGTAAATAC 59869 33 100.0 33 ................................. TATGATCTGGAGCTGCCCTCTATCGTAGTATCC 59935 33 100.0 35 ................................. ACCGATCTCGCCAACGACAACCGACAGGAGGACGC 60003 33 100.0 35 ................................. TATGTCTATCACGCCAAGATGATGTGCCCGGACGG 60071 33 100.0 34 ................................. AGGAAGCCGAGGACGGCGTTGACGCCGTCGCGGA 60138 33 100.0 35 ................................. AACAACACAGGCGAACACCTCATCCAAATGGCGGA 60206 33 100.0 33 ................................. CTTTAAATTGACTCGCACCCGCTGAGTCATCTC 60272 33 100.0 33 ................................. GCCTCTCTTTCTTTCCTGGGGCCAGTACGCCCG 60338 33 100.0 35 ................................. TCCTCCAGCTCCGTTTTGATGTCTGCCAGGAAGCC 60406 33 100.0 36 ................................. TTGGCGTATCTGCGGGACGCAGAGGAGCGGCACCGC 60475 33 100.0 33 ................................. CTGAAAGAGAAGCTGCTGGCGATCCCGGGCGCT 60541 33 100.0 35 ................................. GACCGGTATCTGACGAACTGCATCGAGGACGCGGT 60609 33 100.0 35 ................................. ATCGAGCTCTCTGCCTGGCTGAAGGACGAAGGCTA 60677 33 100.0 34 ................................. TCGGACGCAAAGGAAGGCCCATTGTCCACGCTGA 60744 33 100.0 33 ................................. CTCCATATCGCCCGTCAGCCGCTCCTTATCCTC 60810 33 100.0 34 ................................. TCCGTGATCACCCGCTGGGCCTCCGGCGCGATGG 60877 33 100.0 33 ................................. ACAAATAAAGGAAAGAACAGACAAGGGCGGAAC 60943 33 100.0 35 ................................. CTCCATATCGCCCGTCAGCCGCTCCTTATCCTCGT 61011 33 100.0 34 ................................. CTGAGTCGTGAGAAGGGAGAGATCCGCGTGAGCT 61078 33 100.0 35 ................................. TGTCCCTGCACTCCAACGCCTGCGGGACGGAGAGC 61146 33 100.0 36 ................................. ATTGCGAGCTTGGATGCTGGGATCTATGTGGATGGG 61215 33 100.0 33 ................................. AACAGAGAATGCAGAGGAAACCGTGTACCCTAA 61281 33 100.0 34 ................................. AGCTATACCGATGAGATCACCGTGCCCGTATCGG 61348 33 100.0 35 ................................. GGAGGCCAACGAGGATGCGGAGGACGACGGCGATC 61416 33 100.0 34 ................................. ATCGAGCTCTCTGCCTGGCTGAAGGACGAAGGCT 61483 33 100.0 35 ................................. TCCAGGGTCTCTCCGTCCAGCCGGAGCATATCCCG 61551 33 100.0 36 ................................. GGGGAGGACAAGCGTATCCCCTACCTGCGGTTCGAC 61620 33 100.0 36 ................................. CTCCTGGAGGCCGTATATCCGGAGGACAGCGGCGAC 61689 33 100.0 35 ................................. CTGGCTATCCCGCTGGACCGTATGGTGGACAATCA 61757 33 100.0 33 ................................. GGGGACCGGGTGTCGGAGGAAGCGCTGGAGGCC 61823 33 100.0 37 ................................. ACAGAGCAGTTCCAGCCCAGGATATCCCTCGACAGGA 61893 33 100.0 35 ................................. GGCAATGCCGATGAGGCGTTCCCGGCGATTCCCGG 61961 33 100.0 36 ................................. CGGTATGGCCCAGGCGATCCAGACATTGGGTGCATC 62030 33 100.0 34 ................................. GAAGAGGTGCTGTGAAATGTGACATCAGTGCCGC 62097 33 100.0 36 ................................. TGTAGCCCTCGAATTTGCTTGGATCTGAGCATTACC 62166 33 100.0 35 ................................. AATACCATCATTGAGGCGTGGCCCACCATTGAGCC 62234 33 100.0 34 ................................. AGCAGATCGTCGATGATGTCCGCAGCATACATGC 62301 33 100.0 35 ................................. GATACGGGTCTTGGAGGCGGCCGAGGTCTGCGTGT 62369 33 100.0 35 ................................. TTTGACAAGCTCTTCGGCGGAGCCAAGGAGGCCAC 62437 33 100.0 34 ................................. AGGGCGGCGCGGGTAGAAGGGGCCAGGTTGCGGA 62504 33 100.0 35 ................................. ACCCGGAACAGCCGTAAGATCTATACCAACGGCCA 62572 33 100.0 33 ................................. AGGCACATCTTGCTACCGGAAGCGCTATTGGGG 62638 33 100.0 33 ................................. GCCCAGGGTGTCCTCTGCTATTGATATAAAAAG 62704 33 100.0 33 ................................. ATCTCCCTGCACTCCAATGCAGATAGCGCCAAG 62770 33 100.0 37 ................................. GTTAACAGATCAACATCCTCCCTGTTGGTGTGGAACC 62840 33 100.0 34 ................................. TTCCAGTATTTACGCCAGAGCTGCGGACTTGGTG 62907 33 100.0 34 ................................. TCCGCTCTGTAAGCCGCAAGCTCCGAGGGAAGCG 62974 33 100.0 36 ................................. AAAGGGTTCCGGGTCCGGCGGCAGCAGCGGATACAC 63043 33 100.0 34 ................................. AGTTTTACCGCCTGCAGCATGGACCGGGACGGGA 63110 33 100.0 35 ................................. GACGGCCTCGGCGACGAACACGCCGTCGGTCCCCA 63178 33 100.0 36 ................................. AGCCGGGAGGTCATTGACACCATGGTGGCCGCAGGG 63247 33 100.0 35 ................................. CTGAATGAGGTGGATGATACCGTCCGCAGCGCCCG 63315 33 100.0 35 ................................. GAGGTCAATGGGAATGTGCTGGAGGCCAAGCTCTA 63383 33 100.0 35 ................................. CACCTCCATGACCAGAACGCCGGCATAGGCCCCCG 63451 33 100.0 34 ................................. CTCTTGTGTAAGCTCCATAATTTCCGAAAAATCT 63518 33 100.0 34 ................................. CGACACGACTTAGAGAACTTAGAAAAGGCAAAAA 63585 33 100.0 33 ................................. TGCAATGCCTGTTTCTGCCGCAATCTTAATCTT 63651 33 100.0 36 ................................. TGGTATGAGCCGGATCGGGAGAAACTGGAACGGAAC 63720 33 100.0 35 ................................. TTGAATGTCATCATAAGATCACCTCTTGCATATAA 63788 33 100.0 35 ................................. AGAAGTGAAAAATACTGGTGTCTACAGGATGTCCG 63856 33 100.0 34 ................................. CTGCTCGTCAATGGTGAGAACACCATCAACCACC 63923 33 100.0 35 ................................. GCATAGAGCGGCATAAGCATATCCCCCCACTTGGA 63991 33 100.0 34 ................................. CTGACGTTGGCCAAAAACATATCCTTGGCGTTCT 64058 33 100.0 37 ................................. ACCACAAAGGTTTGTCCCGGAGTTACCGGGATCGTGG 64128 33 100.0 34 ................................. AGACGCAATACCCGACGTTGTACTATTTTGACCC 64195 33 100.0 34 ................................. ATTTTTGACCTCCCTAACCTGAGCCACCCACTGC 64262 33 100.0 36 ................................. TGAAAATGTGGCCGAGCGCGTACTTGCTTACTACAG 64331 33 100.0 35 ................................. CAGGCGCTCTTTAACCGGACGATCCGGAATTGAAG 64399 33 100.0 35 ................................. TCTTTTTAATCCCGCCAGTGGGCGTGGTTATAAAA 64467 33 100.0 36 ................................. TGCGCCCTCAGCCGGGCTCGAACCGGCGACCCTAGC 64536 33 100.0 36 ................................. CTACCTAGGTACAGATGGGAACGTTTACAGCGGGAT 64605 33 100.0 34 ................................. AAAAATGTGGTGGTCAGCCCGGCTGCGGTGACCG 64672 33 100.0 35 ................................. TTGACTTTTGTATGAGTACACAATGTTGAGGAGGC 64740 33 100.0 34 ................................. GCGGCCTCCAGCGGGTCCGGTGCCGGGTGGCTGG 64807 33 100.0 35 ................................. TTGACTTTTGTATGAGTACACAATGTTGAGGAGGC 64875 33 100.0 34 ................................. GCGGCCTCCAGCGGGTCCGGTGCCGGGTGGCTGG 64942 32 78.8 0 ..............-.........A..CTCC.C | ========== ====== ====== ====== ================================= ===================================== ================== 77 33 99.7 35 GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Left flank : ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTGCCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAGCGCGCAGAAAATCGCCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGAAGAGGATATTTGTAAGAATTGTCTATTTTTCACGAGAACAGATTGAATTTTTAGCTGTTTTTGCT # Right flank : CTTTATACGGTCGCTCACATATGGATAAGACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAATGAATATCCAACAGGCCCAATGGTTTCTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATGGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCCCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCATGGAGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAGCCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.50,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.42,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //