Array 1 61658-60903 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIXZ01000013.1 Haloarcula mannanilytica strain MD-130 sequence13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 61657 30 100.0 34 .............................. TAAGACACAATCTATAAGTGTAAGTGGGTTCTAC 61593 30 100.0 35 .............................. CCATGCGGCATTTTCGGGAACCGTTGTGACCGTAT 61528 30 100.0 36 .............................. CTCCCGGAGCGTGTCCACACTCGCCCGTATCATCTT 61462 30 100.0 35 .............................. GGCGGAACTACCGATGTCAACGTCACGCCCTCCGT 61397 30 100.0 36 .............................. CGTCTTCGTCCGACCCACCGCCGTCCGTGAGACCGA 61331 30 100.0 35 .............................. GTCGACGGCACGGACATTTCGCCGTCGAAGGTCGA 61266 30 100.0 37 .............................. CAATTGTGTCTCCCTGTCGCCAACCTCGATTTCAAAA 61199 30 100.0 38 .............................. ATGCTCGAAAAGGGTATCTCGCCGACGGTCGAAAACCG 61131 30 100.0 36 .............................. AAAATGCCTAAACGAGCGAAAGGGTCGAAGCAGTGG 61065 30 100.0 36 .............................. CACCGCTCATGATTTGCGCTCCCATGCAGTCCCGCA 60999 30 100.0 37 .............................. TGATACTCACGCCAGCCAGCACTCCGGACACAAGCAA 60932 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 100.0 36 GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Left flank : GGCTCCGCCGTCCGAGCGCGTGAATGGTACCGTGAGTTCCGTGAAATCGTCCTGATGTGTACGGTCTACAACATCAAACAGTACGTGACCGCCTGATTCCAACGCCGTATGGTGATTCAATGGAGCCCA # Right flank : ACCTCGCGTTTGCATCGGACCGAGTCGGGGTCGAGTTTCAGACGAACAACCAGACTCTGGTCCTCAGCATCGACAGCCACAGGCCAGCGGTGACATCTTCCAGAACCATTTTGTGTTCTCTGGTGAGTGAGAGACAACAGACTTCCAACTCAGTACGTTTAGAGACAAATATAGCGTCGTTACGGGTTTCTATGACGCGAACATGAAAAGTTCAGTTCGTCACCGAGTTCTCGCTGCATCTCCTACCGCTGACGTCGTCGACAGTCCTTCTCCCAGACGACACGCCCGCTGGCGGATCTCTGCTCATCGGCGATCTGCTCTATCTCTTCCATCAGTCGTGTCATCGCCCGATAGTTGGAGTTGTACCAGAACCGCCGTGTAGTCTTCAGCGTTGATACGTCGCCGTTGAACTGTGTCGGAATGGATGTGTTCCGTCAACGATGTTGTCGAAGAACTCCAGCGGACGCAGGACAGGTACCAGTACCGGGTTGAGTACATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 14116-12907 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIXZ01000015.1 Haloarcula mannanilytica strain MD-130 sequence15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 14115 30 100.0 35 .............................. GTGTTCGAGCAGTCAGTATGACCCGTCAAAATCTG 14050 30 100.0 36 .............................. CCGCGCTCGGCCCACTCCTCAAGCCGCGGATAGGAG 13984 30 100.0 36 .............................. ACGTAGACCGTTGGATCCTGTGTCACTGTGTGCTCC 13918 30 100.0 34 .............................. GGCGTCGGCCGGTCCGAAAGCCCCACGTACGACG 13854 30 100.0 35 .............................. GATCCACTCCCCCGTCTCCCGACGGAGGTACGCCA 13789 30 100.0 39 .............................. TTTGTCCGGATTATCAGGTCCTCGGAGTCCTCGACAAAC 13720 30 100.0 36 .............................. AGAAAGATCGACCAGAACGCCAGCGGGCAGTTCTAC 13654 30 100.0 36 .............................. AGAAAGATCGACCAGAACGCCAGCGGGCAGTTCTAC 13588 30 100.0 38 .............................. GCCAAGATCCGGACCTGCCCAGCATCGACGCCGCCGGG 13520 30 90.0 33 .............C....G.C......... GGGCCGTCGTGGTCAACGGTGATTCGGCTTCGA 13457 30 90.0 34 .............C....G.C......... CTCCCGAAGCGTGTCCACACTCGCCCGAATCATC 13393 30 90.0 35 .............C....G.C......... GTCCGCGTCACCGACTACACGGACGTGCTTGCTGG 13328 30 90.0 36 .............C....G.C......... GCTGGGGAAAGAGCGATACATGGACAAGCAGGACGC 13262 30 96.7 36 .............C................ ACCCGGCAGAACCCCTCCTGTTCCACTATCACACAC 13196 30 86.7 37 .............C..C.G.C......... GGCGGCCCGAAGTCCTGTTGTGGGTGTGGCTGGACGC 13129 30 86.7 32 .............C..C.G.C......... TCCGCAAAATCGTGAGGGGCATCTGATGGCTG 13067 30 96.7 36 .............C................ CGCGGGTATGATGGCGATAGTGTCCGCGAAAACGGC 13001 30 93.3 35 .............C...............G GGTAAAGCCGTCGAAATCGTGGATCACGGCGAACT 12936 30 73.3 0 ...G.......C.G...TA.C.......AT | ========== ====== ====== ====== ============================== ======================================= ================== 19 30 94.4 36 GTTACAGACGGACTCTTGTGGGGTTGAAGC # Left flank : CAGTCGGACCAACTCCTAATGCGAGATGCCAGAGAAGCGACCGTAGAGTACGATACTGTGTCTGGTCGTGGCATCGGTAGTAGCCGCTCCGAGTGAATCACTCGGGACGGTTTGCTCACCGGTGCAGAGTACATCCTGTTCTGGAAGCAGTGATGATCCGTCTATGCCATCATCGTCTACGACGTGTGGCGGATCGGACACCAAGGTTCCACAAGTTCTTCTGCGGTCTCTTACACACGTTCAAAGCTCCGTCGAGGGGGAGGTCACCGAGGGAACGCTTGTTGAAATCAAGGAAACACTCCAGTTGATGCTCTAAGATGCTGAGTCCACCATGGTCGAATGGATACCGAATGTTATATCGACTGCTCGGTATCCAGTGATGACCAGCAATTTCTGCAGCTATCGTCGACCCCCCAGGGGTTCAGGGGGTATTGCCGGTCGACGAAAATAGTGAAGTGAAACCACGCTAGAGATAGGCTGTGCTCCGGAAATCGGGCATG # Right flank : GACGAGGACAATATGCCACTGTCGATAGAGCATATTTCAGATGGATCTTCCAGCAGCAGAAGCAGAGTTCTCATTCGATATGCGTACTGTGGAGTGGTTTAGAAGGGCACTTCGAGAGGGGGGCTGCATCTCGGGTCGATCGTTGTCTGACGCAGTACTAAGTGGTTCGGACAGTTTGTACAGTTTGTATGGCCGAACCAGCCAAAATAGCTGTCAGTAACCAGAAAGGCGGTGTCGGCAAGACGGCCGTCGCGATCAACGCCGCCGGTGCGCTGAACGCCCGTGGCCGGGACGTCCTCTTCGTTGACCTCGACCCGCAGGGGAACGCCACGGAGAACCTCGGCCTTCGCGAAGCGTACGATAGCGAGCCCCCGTCGCTGTTCGATATCCTCAGTGATTCCGAGCAGCGCGACCGCATCGGTGAACTCGTCCGTGAGCACGAGGAGATGTCGGTCATCCCCTCAAACATCGACATGACTGCCGTCGAGCCAGAGCTCACG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGGACTCTTGTGGGGTTGAAGC # Alternate repeat : GTTACAGACGGACCCTTGGGCGGTTGAAGC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.10,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 24989-22015 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIXZ01000015.1 Haloarcula mannanilytica strain MD-130 sequence15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 24988 29 100.0 37 ............................. CCGCCAGAGCCTGTTGATCGAACTCCGCGAACACCAG 24922 29 100.0 35 ............................. CGCCAACGGCGAGATCTCCTACGTGTTCGGCACGT 24858 29 100.0 39 ............................. CTGGCGTTCGCGGCGATGGGTGGTGATGCGTGATGAGTT 24790 29 100.0 37 ............................. CTTGTCGAAGCAGTCCAGAGCGCTGGCGGCGACGAAA 24724 29 100.0 38 ............................. CCTTCTTTTGTGCGAGGTCCTTCCATTCCTCCAGTTCA 24657 29 100.0 36 ............................. CCCGATCGAGGTGTCCCAGCGTTAGGACAGTTGCCT 24592 29 100.0 37 ............................. CAGCACTTCGACTCCCCGACCGCGGACTCGGTAGACA 24526 29 100.0 39 ............................. CGTTGTGATGTGGGTCGCCGTGTGTGCCATCAGTTACCA 24458 29 100.0 36 ............................. CGCACCTTGAGGGAGTTGTACCCTGGCATCGGTTCC 24393 29 100.0 38 ............................. CGACAACGACAACGGCGGCAACGGCGGCTACCTGGCCG 24326 29 100.0 37 ............................. CGAGCTGATCTACGGACTGATCCAAGGGATAGCAAGA 24260 29 100.0 37 ............................. CGCGTCCGGTGTGAGGCCGGGTATGCCTACGAGACGC 24194 29 100.0 38 ............................. CTACAAAAAATACCACTACAGCAATGGGGTCGGGAACG 24127 29 100.0 36 ............................. CGACGGGATGTGCTTGAGTATCTCCTCCAGCGCTTC 24062 29 100.0 37 ............................. CGGGAGTAGATACCACAAAACGGCTGCAGACACAATT 23996 29 100.0 37 ............................. CGTCGGCCTGGGCGGCGTCCGGGTGGCCTTCGAGAAG 23930 29 100.0 36 ............................. CCTCCCGTACTCTACTCGGTCGGTCACAGTGTGGTG 23865 29 100.0 34 ............................. CATTATACTACCGTCGACGGGAATATATTCGCCG 23802 29 100.0 37 ............................. CTTTCAGGACCCAACCATGTCAGCACCCGAATCATCG 23736 29 100.0 37 ............................. CAGGCTGTTGAGTTCGACAATGAATCCGAGACGAAGC 23670 29 100.0 36 ............................. CCCGAAGATCATGCAGGAGAAGGTGGCTTCGACACT 23605 29 100.0 36 ............................. CGAGCGACAACAGCGACAACAACGCAGTCACGCCAG 23540 29 100.0 36 ............................. CATGCACTATTCCGAGCGACTCGTTGATAGTCAGGA 23475 29 100.0 36 ............................. CGATCCCAGAGCGGAGATGGTCGTCGAGCGCTTCTT 23410 29 100.0 36 ............................. CAACCGCGTCAACGACCTGCCGAACTCCTGGAGGTT 23345 29 100.0 34 ............................. CGTAGAACGCTTGGAGTCGGCCCTGTAGCCGCGT 23282 29 100.0 34 ............................. TCCGGTGACTGTCGGGCTCGTGATGTTTGGCCTG 23219 29 100.0 38 ............................. TTGCCGAAGCCCCATTGCTAAGCTGTGCTGGGTCTGGT 23152 29 100.0 35 ............................. TCATCTGTGCGATAATGTCGTCTTGCTCTTGGGTC 23088 29 100.0 34 ............................. TCTGATGGTTTGACCGTCGCCACCCCGTAGCGAG 23025 29 100.0 34 ............................. TCGAGAGCGAGAGGTCCGAGGTGTCAGCGAGCAG 22962 29 100.0 37 ............................. GGCCTTCCACAAGTTCAACTCGGTAGCGATGACTGTT 22896 29 100.0 37 ............................. GCGACAACCAGACCATCAAACGCTGGGTGCGCGCCTA 22830 29 100.0 36 ............................. GCCAACAACCTGAGCGGGTCCCCTGACCCTCCCGAA 22765 29 100.0 36 ............................. GGCGTTCGTCGGCGGCCTGTTGCTGTATGCAGGCTT 22700 29 100.0 37 ............................. GCCGGAGGCTCGAACGCTGGACGGGTCCCGGGAGATC 22634 29 100.0 35 ............................. GAAGATCCTCGATATCGGGCAGGGCGGCCGGGTCC 22570 29 100.0 38 ............................. GCACTGCTCATCGTTCTCTTTGTACCGAATGAAGGCAG 22503 29 100.0 36 ............................. GACGAACCAGCCATCCGGAACCCGACCGAGTGCCCA 22438 29 100.0 37 ............................. GTTGTCTCGGCTGTGGGACACCGTGCATAAATCCGGT 22372 29 100.0 35 ............................. CGTCCGTTCGACGGCCGACCACCGGATCGCCCGGA 22308 29 100.0 35 ............................. CTTGGTCGTTTGCCGACTGACAAATGGGTGCAAGC 22244 29 89.7 37 ...C........T....T........... CGGAATCGCCGGAGTCCCGATTTATCATCCGTTTCGG 22178 29 89.7 38 ...T.........T...A........... CAAAGCGAAGCTCGGACTTCGGATGGTCACCATCGGAC 22111 29 96.6 39 ......................A...... CAACGCGACCGACAAGTCGTACTATATCCTCGTCGAACC 22043 29 72.4 0 ...T....A.....AG..AATT....... | ========== ====== ====== ====== ============================= ======================================= ================== 46 29 98.9 36 GTTACAGACGGACCCTTGGGCGGTTGAAG # Left flank : GTCGAGTTAGTCGATACGGCCTTCGAGACGCTTTCACAGTGGTGCGAATATACTCGGCGTGAGCGTGGCTGAGACATCGGGCCGCACATCGGTGGGTCGCTCGTCGACGATCTTGTTCGGGGTGTCGAAGCATGAGCTGTACCGTAGAAGAGCGGCGGCGTGTTCGTCGAGCTGCCCGAGCGATTCGTGACGAGGTCCCGACCGAGTCCGTGGACGTGCTTGCGCCGAGCGCCAGTCAGTACGATGCGTGGACGCTCGATGCTGTATTGAGGGACGTTGAGGGTGTACCGCCCGAAGTGCTTCGGGAGCTCGCGTTGGCTGGGTTGACGTTGCAGCCGATGCCATCACAGACGGAGTATCAGCACGTGGCGGCGACAGTGTAGGAGCATATCGCCGTGTGTTTCGTCGACCCCCCGGGGGTAGAGAGGATATTGCCGGTCGACGAAAATAGTGAAGTGAAACCACGCTAGAGATGGGCTGTGTCCCGGAAATCGGGCATG # Right flank : CCTCGGAATGGAAGTCGACCTGACCGACCCAATGGTGATTTCAGACGGACCCCTGTGGTGTCACTACTTTCACTGTGGTCAGATGGAATTTATAAGCCATGATATTCTCAACTAACGTGTTATGCAACACTCACAAACGACAGAGGTGATTTGACCGGTGCGGATCCTCGCACGACTCCACGCACGCAGAGACGCCGCCTACGACAACACGTATCACAACAAGCTCCAGGGCCGCATCTGGCAGGCCCTCGAAGACAGCCAGTACGACGCACTCCACGACGAGAACCAGCCAAAGCCGTTCGTCTACAGTAACCCCTTCCCACCGCAGGACATGGAGGAGGGTGACGAACGAACACTGCTGGTTGCCTCACCCGAGGAGTCACTGCTTGCCCATATCGCCGAGGACCTCACTCACGACCGTGAGCTGAACATCGGCGAGATGCCCTTCCACGTCGACGAGGTCACGCCGCTGTCACCGGACGTCGGCGAGCCTGGAACCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGGACCCTTGGGCGGTTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //