Array 1 8414-10696 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLHV01000024.1 Klebsiella pneumoniae strain k298, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8414 29 100.0 32 ............................. TTTCTTGATGCTATGTTGAAGAAGATGAGGGG 8475 29 100.0 32 ............................. ATTTGGCAGAGGCTGGTCGTGTCGATGTCGAA 8536 29 100.0 32 ............................. ATACGTCTGTTACTTTGCTATCATTAGAAAGC 8597 29 100.0 32 ............................. TTTCCTGTACTGTTCAGTTGCATAGTCCAGCA 8658 29 100.0 32 ............................. AAATCGCAACGCACATCGAAGCCGGAAAAGTT 8719 29 100.0 32 ............................. AATACACGGGCGTTCAGGTTAAATATTTTGAC 8780 29 100.0 32 ............................. TGTCATACGACCTGGTAAACGACCGTTCCATG 8841 29 96.6 32 ..A.......................... GTTTTGTCGACAAAGTACGTCTGCTCTCTTGA 8902 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 8963 29 100.0 32 ............................. TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 9024 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 9085 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 9146 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 9207 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 9268 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 9329 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 9390 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 9451 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 9512 29 100.0 32 ............................. CAGTAGCAGCCATCGCTGAGGTGAAGGGCTGG 9573 29 100.0 32 ............................. GCGAATATAGGCATTAATGCTTTTAATAATAT 9634 29 100.0 32 ............................. CTCCGTCACCAGTTCTGTGCTATCCGGCACAA 9695 29 100.0 32 ............................. CTCGGTGACCGGCAGATCGTTTTGAAACACAT 9756 29 100.0 32 ............................. CGTCTGGCGAGGTTTACGACGAGCTGACGTTC 9817 29 100.0 32 ............................. TCACGTTTGCAGAACTCGCGGAGGAAGAAGAA 9878 29 96.6 32 ..A.......................... AACGTAATTGGCTTACGGGGCGGTCGGCACAA 9939 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 10000 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 10061 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 10122 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 10183 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 10244 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 10305 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 10366 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 10427 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 10488 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 10549 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 10610 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 10668 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 38 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGAGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //