Array 1 2641-1388 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPFX01000040.1 Fructilactobacillus sanfranciscensis strain Ls-1001 scaffold40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =========================================================== ================== 2640 36 100.0 30 .................................... AAAATCCGGATTGCTTTATTTCTAGGGCAT 2574 36 100.0 30 .................................... TTTTGTTAGCAATTTTTCACTAAAACCAAA 2508 36 100.0 30 .................................... CACGATTGATTATGTTGTCAGGACTGGATA 2442 36 100.0 30 .................................... CCGATGGTGCTAAGGGTTCACCTACGGCCA 2376 36 100.0 30 .................................... TAACAGGCTTAATGACCAACTGCGTGTTAA 2310 36 100.0 30 .................................... TTGAATTTACTTCGTGAGCAATCTAATTTT 2244 36 100.0 30 .................................... CTAATAAAAAGGTGTTGGTTAAAATTCAAC 2178 36 100.0 30 .................................... CAACCATTGTAGATTGTGGAATAATCACAG 2112 36 100.0 30 .................................... AAGTTATATTATAATATAACTTTATTATAA 2046 36 100.0 30 .................................... TAAAGCCCGTTTTACTACTACCGACAATCT 1980 36 100.0 30 .................................... TATTTAAAGGGGTCGTTGATTCTATTGCTG 1914 36 100.0 59 .................................... TCCACAGGAATGTTGAACTCACAAAGTCNTAAAGCCCGTTTTACTACTACCGACAATCT 1819 36 100.0 30 .................................... TATTTAAAGGGGTCGTTGATTCTATTGCTG 1753 36 100.0 30 .................................... GAAAATAATATTCAGTTGGAGTGTTATCAT 1687 36 100.0 30 .................................... TCCTTTAGTTAGTTATGCAAACGGTACTAA 1621 36 100.0 30 .................................... TTGGATCACCGGGATTAGCCGCAGCTGTTG 1555 36 100.0 30 .................................... CTGTGGCGATCCAAAGACTTTAGAAAAGTA 1489 36 100.0 30 .................................... AACCACTGAAGAAACTAGCAATTCCTTTAA 1423 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =========================================================== ================== 19 36 100.0 32 GTTTTAGAAGTACGTCATTCTAATGAGATTAAGAGC # Left flank : TAGTGACTAATACTGAGCAAACCCTAAAATTTAAAACAAAAATTAAAAATGATGTATTAAATAATCTAAATGATGATAATCGAAAACGGTTATTTCAACTCGATGCAGAAATGAAAGAGATTTTTTTAGGTGCCGCTTATTTAGATGATTTCCCCATCCAAGTTGATGAAGATTGGGATATTAATAAACAATATGCATATACAGGTACTAAATTGTTGAATGTGAATCATGATAATCCATATGATATAATTAAAGAAGTTCTTAATTTATATGCGAAATTTGATTCAAAAAAGTTGTTAGTTCTTAAAAATCTATTTAATTATTTGTATTCCAATCAGATTGAAAGTCTGGTTCAAATGATTAAAGCTTTAGAATTGAACGTACTTATTTTAGATTTTTCAAGTGAAGATTATTCCACTTTTCTAGAAGAATGCCGTTATTACTGCGTTGACAGAGACTTTGTGAGATGGGATTCTGCTGATAGGTGAATATTACAGACG # Right flank : AGATATACTCCATTGTGTTATACTGGTAAATGAATATAAAAACTAAATAAAAGGTGGAGAATGCATGTTTGAGAGTTATAAGAGAGTTTTGACAAACCTACCAGAATATTCTAAGAATATTTTTCGTAAGGGATATTTTAAATGGCTATTGGGTCAAGTAAAAGGTTGGAGTAAGATTAGTTATGCTTTATTAGTAGTAAACTTTATTTTACAAGTTTATATTTTAACAACTACTCTTATAGGTAGCCCTTCTCCAGAATTATTATGGGGAGCAATTTTTGGATTTATTGGCTCTAACTTAGCAGTATTGACAGTTTGTGGCATTAGTAATTTAAGTCCTATCCAGGGATGGGCTGCGGCATGCTCAGCAGTGTTTATTATCTTATCTGCTGCTATTGCACACAATTATGCTAATATTGTAGAACAATTGGTTTACTTTTTTGCACTAGATTTATTCTGTATCTTAGACCCCCAGTGGAATGAAGACATCCATGTAGAAT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTACGTCATTCTAATGAGATTAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //