Array 1 172052-174461 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPEB01000009.1 Klebsiella aerogenes strain URMC210 NODE_9_length_222087_cov_53.663309, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 172052 29 100.0 32 ............................. CCAATCATGATGCGATCCAGCGACATCTGACG 172113 29 100.0 32 ............................. CGTGCATATCGGCATGGTGTGCTCCTGTGCAA 172174 29 100.0 32 ............................. ATGAATACAGTTAAACTAAAAGCACGTTAATC 172235 29 100.0 32 ............................. CCAACGTAAATAGTCCTCATCCCCTTTCCATT 172296 29 100.0 32 ............................. AAAGTTAATCGGGGGAATTTGTGGTTTTAAGA 172357 29 100.0 32 ............................. GCCACTATTTGCATTAACTTCAGTAATGCCAT 172418 29 100.0 32 ............................. CAGCATAGGCCACGGCACCCGTATTCGGTCCC 172479 29 100.0 32 ............................. AGTAGAGCGCTATTTCCCCTGCAGGAACCTGG 172540 29 100.0 32 ............................. ATTATCACTGATTTTCTCCCCCTGTAATTCTC 172601 29 100.0 32 ............................. CTGTCTGAAACGACGCAGGATATCGGCCGGGA 172662 29 100.0 32 ............................. CACTGTGATGTTCCCGCTGGCATAGGCATTGG 172723 29 100.0 32 ............................. CGATATGGCCCTGATTAATGCAGCTGCAATCG 172784 29 100.0 32 ............................. CTGGCAATAGGTATAAAACGCTTGGCGATAAG 172845 29 100.0 32 ............................. TTAGTAACAGGGATCGGCCCAGCCAACGCTTA 172906 29 100.0 32 ............................. AGGTCAGGAACACGCTCAAAACGTGGCGGGGT 172967 29 100.0 32 ............................. CATTTCTCTCTTCATCTGCCAGGTGGCCTGGA 173028 29 100.0 32 ............................. GCAATTGGGCGATCATTTGGGCCTTATTCATG 173089 29 100.0 32 ............................. CCGTGCGCAATCTGGCCGCAAAAGAAAAAATC 173150 29 100.0 32 ............................. AAAAATTACATCCAGCTAATTCCGGGGAAACC 173211 29 100.0 32 ............................. CCGCTATCGCCTCAAAATCGCTCAGCGCCTCC 173272 29 100.0 33 ............................. GACCGCATGGTCGAAATTGATGTTGGTCTTGAC 173334 29 100.0 33 ............................. CCAGTATTCAAGGGCAGGCAGGCCGCCCGCCGC 173396 29 100.0 32 ............................. GTGAAGGATGAGGTATGCAATACGGTTAAATC 173457 29 100.0 32 ............................. ATAGCGATCGCGGCGTCGCCGTGACGTTTTCG 173518 29 100.0 32 ............................. GCGGCAGCAGTATGACAGTTACGGAGTATTAA 173579 29 100.0 32 ............................. CATATAGCGTCCCCACCACCAAACACATGTTT 173640 29 100.0 32 ............................. GTTCGACACCCGACCTGTAATGGCTGTAATAG 173701 29 100.0 32 ............................. TACATCCGCCGGGCAGCAGTGCTTGACCCTGC 173762 29 93.1 32 ...........T....T............ CCTCGCATCACGGTTCCGGATCTCGGGCTGAA 173823 29 100.0 32 ............................. ATAATTTAGTTTTTGGCAAATGGCGAACAACC 173884 29 100.0 32 ............................. CGTGTCAGCAATGACTACCTGATCGGGTGTTT 173945 29 100.0 32 ............................. CAGTACATCTCCACGCTTTCACAGGTTACCGA 174006 29 100.0 32 ............................. AGTTATGCGATACCGGCGTCAACATGGGGCCG 174067 29 100.0 32 ............................. GAGTGGGGGGATATTCGCCAGCGACTGTCTTC 174128 29 100.0 32 ............................. GAAAATCGAGGATGGTTCATCCACTTTGCGAC 174189 29 100.0 32 ............................. GCTGACACTCAGCGAGCAGAACAAGATTTAGC 174250 29 100.0 32 ............................. CTTGGTGGCAGTGGTTCTCATACTAACAACTG 174311 29 100.0 32 ............................. AACGCATAGGAATCAGCAAAAGGAGTCTTGCA 174372 29 93.1 32 G............T............... GGCACATCGGGTAAACAAACGTTTTCTGGTAT 174433 29 82.8 0 G........C.AT.C.............. | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.2 32 ATGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTTGCTGCAGGCGAAATTCTGCCTCCTCTGCCCCCTGAAGATGCACAACCTGTTGCGATCCCACTTCCCGTCTCTTTGGGAGATATCGGCCATCGGAGCAACTGATAATGAGCATGTTGGTTGTTGTGACAGAAAACGTACCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGTTGCTGGAGGTTCGTGCTGGAGTCTACGTTGGCGATACTTCAAAGCGGATCCGGGAAATGATTTGGCAACAGGTGATACAGCTCAGTGATGGCGGAAATGTCGTGATGGCTTGGGCGACGAATAGTGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGTATGCCGGTAGATTTGGATGGCTTGCGACTGGTTTCATTTCTTCCCATTGAAAATCAGTGAGTTGCATGTTCTTTAATAATATGAAATTGTTGGAATAAAGTTGGTAGATTGTTGTTGTCTTAAAAAATCATTATAAAACAGTAGCATATGTTTAGT # Right flank : GTCTGCAACCGAGTCTAAGGTAAAATCAGCACCGTATTCCCCGCTCTTACCGTTGCAACCCTACAAAATATATCTTTGCCAACAATTTCATTCTCTATTTAACTTATGTATCTAATAAAAATTCATATAGCCTATGAAAATTATTCGCTTAATGAATAATTAAATCTAATTAATAATATTAAACGGCATTGTAAAAAATGCTTGTTATTTTTATTTCTATCCATTTAATATGTCGAGGTTGCATTAATTACTGATTTACTAATTCTTGCTCGGTATTATATGCAATATGAATGGAATCTGGTTTGTTATTTATAATGGATGAGGGGAATCTCAGTGAAATAATATAAAGCTGTTATTTATCAGCAGGGTATGCTGGGTAGTCTGTTGTTTGGCGCATCTAAAGTTGATCCGGTAAAATTCTCTGAGTTCCTGAATAAGAATGCGAGAGAGGGCTGGCGCGTCGTGACCATGGAAAAGGATATCCGTCGCATGATGCTCTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //