Array 1 22841-21853 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJLV01000028.1 Gibbsiella quercinecans strain FRB124 GQ18_contig000028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 22840 28 100.0 32 ............................ GGCTTGCTCAGGTCTTTATCGTTCATCGCTTG 22780 28 100.0 32 ............................ TTAGCGATGTGCATTGCCCGTGCTGTGGAGCC 22720 28 100.0 32 ............................ ATGACGCCGGCAAGAGACTCACCCGCAAACAG 22660 28 100.0 32 ............................ TATCGAATTCTGAGCAACTGCTGCGCTACTGG 22600 28 100.0 32 ............................ TCGGGGAACAACGTATCGCGCGTATCACCGGG 22540 28 100.0 32 ............................ AGGCATTCGTCACCAGTAATAACGGGAAAAGT 22480 28 100.0 32 ............................ AAACGACATCACGCAGCTCCCGGCGCTTATCC 22420 28 100.0 32 ............................ CGGAGGGGAAGGAAGCGCGCCTGAGCTCTGCA 22360 28 100.0 32 ............................ TAAATGCCACGGCGAGGGCAACATTGATATTC 22300 28 100.0 32 ............................ TTATTCCGTCGCGAAGGTGATGCCGTCGATAA 22240 28 96.4 32 ..............T............. TCGGAATCCTTTCGCTGTCCTAATAACATGCG 22180 28 100.0 32 ............................ TCGAAATCAATTTCATGCAGACGCGCAAAGAC 22120 28 100.0 32 ............................ TTTATTGACTACATCATTTTGTTAGGCGCTGA 22060 28 100.0 32 ............................ GAACGCAGCCAGGACGACCACGAGAAAGATAA 22000 28 100.0 32 ............................ ATCAGACCCTAGCCGAAGGCCCGAAACCGCAC 21940 28 96.4 32 ....................A....... TATCTGGTAGCACACCGGCAGCGGAATGCTTG 21880 28 92.9 0 .....................A...G.. | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGCGTTAACTGAACTTCAGGCCGATGCGTGGTTGAAAGGGCTGCGGGACTATACGCAAGCCAGCGAAATTCAGCCGGTTCCGGCTAATGTAAAATTCAGAACGGTAAAACGAGTGCAAGTGAAAAGCAGTGCAGAACGGTTACGCCGCCGCTCGGTTCGTAAGGGCTGGCTGACCGAGGATGAAGCGCGCGAGCGAATATTGCTTTCTGCGGAGAAACGGGTCGCACTGCCGTTCCTGCAATTGAAAAGCTTGTCATCCAGGCAAATGTTCCGGCTGTTTGTGGAACAGGGCGCGCTACAGGATTATGCCGTAACCGGCCGGTTTAGTTCATACGGACTCAGCGAGAGTGCTACCGTGCCTTGGTTTTGACCTTTTTTTTACCGCTAATGCTAACGTACTGATTTTTATCATAGTATTAGCCGCCAGTAAAAAAAGCCTTTTTAAGCCAAAAGTGAATTTTTTCTTTAATACTTATACTGTTATCTTTTATCTATAACG # Right flank : TTATAGATAAAGCGACCATCCAGCGTGTAACAGCCCACTGCCATAAAGGCATCGCCGCTGGCAGTGGTGAACAATCATATCACTGCCAACCCGTCGATAAGGGCGCCGCGCCACCATGCATAGTCGTGGCCGCCGGTATAGATAGCAAGCTGGCTCTCAACGCCAGCGGCGCATAGCCGTTGGTGCAATTGCTCGACATGCGGAACCATCGCCCCTTCCAGTGCCCCCACGCACAGTCTGATCCGCACCGTCTGCGGCGGGCTGGACAATACCCGTTCGCTCACCCACGAGGTATCGCTTTCTTTAAACATGATCGGGCGCCGGCTGTTGTCCGGCATCCACCACATTGAGGGGGAGGTGCTGATTATGGCGCCGAAAACGTCAGGCGCGTGCACGGCGGCCATCAGAGCGGTTACGCCGCCCAGGCTCTGCCCGCACAGCACGGTCTGAGAACGGCCGGCCCAGGCTCTGTCTGGGTGTGCGGCGCGTACCTGCGGTAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //