Array 1 335986-336493 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOHA01000001.1 Isobaculum melis strain DSM 13760, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 335986 33 100.0 34 ................................. AGCTTACCAGAATTTAGTGAGTTGTTTGAACAAA 336053 33 100.0 34 ................................. AGTGATAAGTTTTGGAGTTTCATCATAATTCAAC 336120 33 100.0 36 ................................. AGCTCTTTATCACGTTTACTTCTTGATGCAAATAGC 336189 33 100.0 36 ................................. GCTCATTTTAAGACCGCCATTCTTTTGTATCTCCCT 336258 33 100.0 35 ................................. GCTCATAATTAAGCCTTAACAGGTTTCTTTGATAC 336326 33 100.0 34 ................................. ACATATTATAAGTATTTTTGGCGGTTGGATTATT 336393 33 100.0 35 ................................. CATTTGCACCAGCTGCTCCTCTTGGTCCCGTATCG 336461 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 8 33 100.0 35 GTCTAGCTCTATTTAGAGCTAGTGGATTGAAAT # Left flank : CACTTATAGCTTGGGAGTACTCTTATATTGAGTACTTCTTTTTTTATTATGTGAATATATTACACATAATGAATTCTTAAACAAGCAATATGATATATTATAGGGATATTGCACCTATAGGATGGGCTCAGAATTGGAAAATGCTCTTAATGAGTTGGGAAAATCAAAACAATTTGATGCATCTACTGGAACTTATCTTTTTCATGATTATAGCACTAGCCCATGGTATAATAAATTAAAAGAATATAATGATTCTAGCACATCACAGTGCTTTGAACTTGTTGCTGCGGATAATAAGTTTTTATGTAGAGTATGTATTGATTTTTTAGGATGAAAATTGAGTGCGAACCTTAAGTGTACATGAAATTACTAGGGGATTCGCACCAAAATTTCGAGAAAAATTCTTTGAAAACGAGGGTTTTCTCATTAAAATTTAATTTTTTTGTTAGTTTTTAGGTGAAATAGTGAAAGTATGTTCGTATATTTTGACTGATTTCACA # Right flank : TTAGATGTAAGTGAGCACCAGTGCTATTTCCTGTGCGTCTAGCTCTGTTTAGAGTGCTCAATATTGAGTACTCTTTTTTTATGTGAATATATTATACAAAATATATTTTTTCACAAATTATGTGATATATTAAAAGCAGTATGGGAAAATTTTTACTTATATGAAAATAAGTGAGTAACTAAATCTTGTCTTAAATCTATAATAAATGAAAATTAAAGTAAAAAAGAAGAATAGAGGTATTCTATGTTTATAGCTCATATCAGAAAAGAAGATGGGAAGAAGCAACTCTTAAAAGACCATTTAAAAGAAAGCGCTATCTTAAGCGGAAACTGGGGTAGAAAAATTGGCTTAGAGAAAACATGTTATTTAGCAGGTTTATTACATGACTTAGGGAAATACTCAGATGCATTTCAAATCTATTTAAAACAAGCTGTTGCTGCTCCAACTAGTGTGGTTAGAGGAAGTGTAGATCATTCAACGGCAGGTGGCAAATTGCTCTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTATTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 344814-345791 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOHA01000001.1 Isobaculum melis strain DSM 13760, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 344814 33 100.0 33 ................................. TCTTCTAAATGTTCCCACACTTCAACCGGAAGC 344880 33 100.0 33 ................................. ATATCTTTAGTAAAGCGAGGATCCTTAGCTAAC 344946 33 100.0 38 ................................. TAGTTACCGAGTATCAGATTGATGAAGAAGGGAACTAT 345017 33 100.0 35 ................................. ACAGTGAAATGTGAATGATATGTTAGAAATATCGA 345085 33 100.0 35 ................................. ATTTGGAGAGATTGATTGTATTTCTGATAAAGGTA 345153 33 100.0 35 ................................. ACAGTGAAATGTGAATGATATGTTAGAAATATCGA 345221 33 100.0 35 ................................. ATTTGGAGAGATTGATTGTATTTCTGATAAAGGTA 345289 33 100.0 35 ................................. TTTAAGATGATGCACCATCTCAACTACATGATAGT 345357 33 100.0 34 ................................. TAGCGTCTATGCTCGTGAGAATGACGATAACGGC 345424 33 100.0 33 ................................. GGTTTACAAATCACTTAGTGATAATCAAAAGAT 345490 33 100.0 34 ................................. AATCTCGTGGTCAAACTGATCCACTGTTTTATTT 345557 33 100.0 36 ................................. AGTGTGAAACTCACAATTTTAACGTGTTTTGTGAAA 345626 33 100.0 33 ................................. ACAATATGCACAATGATATGGTTACCACCGTAA 345692 33 100.0 34 ................................. CCAATCAACAATGGCTAATAGAAGAGCTACAGCC 345759 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 15 33 100.0 35 GTCTAACTCTATTTAGAGTTAGTGGATTGAAAT # Left flank : GATGGCTATCCACCGTTTTTATGGAAGTAGGTGAGAACGATTGCTAGTGTTGGTTACTTATGATGTTGCGACAACCTCTAAAAATGGCCCGCGCCGTTTAAGAAAAGTTGCAAAAAAATGTCAAGATTATGGACAGCGGGTACAAAACTCTGTTTTTGAGTGTGTGGTTGATGCTGCCGAATTGACTAAGTTAAAAAAAGAATTGATTGATTTAATTGATGAAGAGATGGATAGTTTACGGATTTATCGATTAGGAAATAATTATCAAAATAAAGTAGAGCACATTGGTGCAAAAGAAAGTTTTAATGTGGAAGATCCATTGATATTTTAAACGTATTATTGGTGCGAACCATAAGTGCACATGAAATCACTGGGGGATTCGCACCAAATTATTAATAGTTTTAACGTGAAATTAGGTGTTTTTCTAATTGAAATTTAATTTAACACAAGTTTTAGGTGGAATAGTGAATGTACGTTCGTGTATTTTGACTGATTTCACG # Right flank : TAGAAAATCAACCATATGCTATTTTTAGAGCTAGTTTACTGAAATATATGTACCAATAGCACGTATACTATGAGGTCAGCTCTATTTAAAGTAAATGAATTAAATCTATTTTCATTTTTTATAAAAGGTTAAAAGATTTGATTTATCTTATTTTTGTAATGATATCTTTGAACGATGTACTATGCGCAACTAGTGTTACAATTTTAATATGGATTGTAATGCTAGAAAATTCTGTAGTAATATTATTTTCAAGCAATTATCCCTTATTGATGATTGTAACAAGCTTTATTTTAATTTACTGAAACTATGAAGTTTTTAAAAATTTCTATTTGGATTATGAAAGGACAACAAATTTAGTAGATAATTAATTTGTTAGCATTTTATCTTCCCTTTCGCCATCGTCAGCCCAGTACTCGCCATATAAACATACTGCATCAAATACATCAACTCACTCACATCTCTCCCAGAATCCGCCGTCCCCTCAGCCACACCAATCTCAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACTCTATTTAGAGTTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.70%AT] # Reference repeat match prediction: F [matched GTCTCACTCTATTTAGAGTGAGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.50,-3.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //