Array 1 1453-798 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFZ01000046.1 Flavobacterium psychrophilum isolate 81-SE571_S23_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1452 46 93.5 30 T....T...G.................................... TAACTTAAAATAAATAAACGCCATGACACA G [1448] 1375 46 97.8 30 ..........................................T... TCACGATCTAATGACGAAAACAATACAAGT 1299 46 100.0 30 .............................................. CCAAAATGGTTGTATGATTCTGAACTAATA 1223 46 100.0 30 .............................................. CAGTAGGAAAAAAAACAATTGATGAGTATT 1147 46 100.0 30 .............................................. TTCAAATTTACATGCACTTAACAGGTTTCA 1071 46 100.0 30 .............................................. AGACCCCTGTAAACGATTGTTTAGATATTA 995 46 100.0 30 .............................................. ACACAGCTGAAGCACTTGACGAAATGATGC 919 46 100.0 30 .............................................. CGTTGTTGGTTTGCGACTCTTGCGGATTTG 843 46 89.1 0 .......................................G..ACTA | ========== ====== ====== ====== ============================================== ============================== ================== 9 46 97.8 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATAAAAATGGCATGTTTTGGTGGTTCTTCTAATGTTTTCAAAAAAGCATTAAATGCTGCAGATGATAACATGTGAACCTCATCGATAATATAAACTTTATATTGTCCCGTTTGTGGGGGGATACGAACTTGATCGATTAGATTACGAATATCATCGACCGAATTGTTTGAAGCCGCATCGAGTTCGAAAACATTGAAAGCAAAATCTTCGTTCGGGTCGTCGTAACCTGGTTGGTTTATTTTTCTGGCTAAAATTCTGGCACAAGTTGTTTTTCCTACGCCACGAGGACCAGTAAATAATAGGGCTGATGCCAAATGATTTGTTTCTATCGCATTTAGTAACGTATTGGTAATGGCTTGCTGCCCCACCACGTCTTTAAACGTTTGCGGACGATATTTACGAGCCGATACTACAAATTGTTCCATAAAAAAATATTCGAAAGCAAATATAATGGTAATAAGTGAAAATGCAAAAGTGAAAAGTGAAAAGTTTTAAAATGT # Right flank : TCCCGCAAAGTGTGTAAGTTAAAAAGTTAGGCTTGAATTTTATAATCTGAGCCTTTTGTCAAATATAAGATTAAATTGATTTAAAACAATACCCCAATTTTGTATTGGCATTGACCATTTTTTTGTTGCTTCTTTTAAAGCTAAATAAACTGATTTTAGAACCGCATCATCAGTAGGGAATGACATTTTATTTTTAGTGTATTTTCTAATTTTTCCATTTAAATTTTCTATTAAATTTGTAGTGTAGATTATTTTTCGAATTTCTAGCGGGAAGTCGAAAAATACGGTTAATTCGTCCCAGTTTTCTCTCCAGGATTTGATGGCATAACCATATTTGGATTCCCATTTTTGAGCAAAATCTTCCAAAGCTAATGCGGCAGCTTGTTTTGTTGGTGCGGTATAAACAAGTTTCATATCGGTTGTGAATTGTTTTTTGTCTTTCCATACCACATATCTACAAGCGTTTCTAATTTGATGTACCACGCAAATTTGTGTTTGTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 8659-6410 **** Predicted by CRISPRDetect 2.4 *** >NZ_UXFZ01000076.1 Flavobacterium psychrophilum isolate 81-SE571_S23_R1.fastq.gz, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 8658 46 100.0 31 .............................................. TTACTCTGAATAAGGTTGTTTTGATGGCGTG 8581 46 100.0 30 .............................................. TTTACAGACGAAAAGGATAGTGCATTACTA 8505 46 100.0 30 .............................................. AGATTATTTTGATTACATCAACGAAATTAA 8429 46 100.0 30 .............................................. GCTCTACAATTCCAGCATCATATAGTTCAA 8353 46 100.0 30 .............................................. TGGCGGAATTAAAAGACCAAATGGGTTTCG 8277 46 100.0 30 .............................................. ATAATTTTTTCAAAAGAAACTCAAGAAATT 8201 46 100.0 30 .............................................. GCCATCTTTTTTTTATTAAAACCCGCCTAG 8125 46 100.0 29 .............................................. ATGTTTAGCCAAATAGATGAAGAAGATGG 8050 46 100.0 30 .............................................. TTGAAAAATATTACGATGAAAGATTCCTTG 7974 46 100.0 31 .............................................. TTGCGATTTTCTGCGATGATTTCAGCATCTT 7897 46 100.0 30 .............................................. AAAAAGAAAAGATTTGACATACACGATGGA 7821 46 100.0 30 .............................................. AGTTACTGATCCAATTTTCATTGACAACAG 7745 46 100.0 30 .............................................. TGCTGTTTTCTGCGAGCCATCTTCTTACCA 7669 46 100.0 30 .............................................. TTATTGGCAAGTATTACATTATGGGTTCAA 7593 46 100.0 30 .............................................. CAATAATCTTTTTTAATATATTCATTTACT 7517 46 100.0 30 .............................................. CACTATCGAATAACTCTTTATGAGAATCGC 7441 46 100.0 29 .............................................. TAGATGATGATAGCGAGCTATGTCCTTGG 7366 46 100.0 30 .............................................. CTACAGCGCGTTGCAAATGTTGGTGGTATA 7290 46 100.0 30 .............................................. ATCAAGAAGCTATTATAGATATGGTTTTAG 7214 46 100.0 30 .............................................. TGGGGCTTATTATGTAACGCCCGAGAAGAC 7138 46 100.0 30 .............................................. TTGCAATTACGCCTCGTAAATAAGGCAATA 7062 46 100.0 30 .............................................. AAAAAAAAGCCTGACACATACGCTTTCACG 6986 46 100.0 29 .............................................. AATACACCTAATAAATTAAGTAACCAAGT 6911 46 100.0 30 .............................................. TGCGAATCTCTTGGGAGCTACCTACAGAAT 6835 46 100.0 30 .............................................. GAGAAAAACTAGCATACGAGATTAGAGATG 6759 46 100.0 30 .............................................. CTAAATCTGTTCGTATATCGTCAAATGATA 6683 46 100.0 30 .............................................. GATGGTCTTTTGTGTCTGGCGCAAGATGTC 6607 46 100.0 30 .............................................. TATAATGACAGTTGTGGGTGGTACAGATGC 6531 46 100.0 30 .............................................. TTAATTTATTGCGACATTCCGTATAAAGGG 6455 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 30 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTCATCTTCACCAAAGGAAGTTTTTATTTTCTTGGTTCCGTGTCCATTACGGTAATTACCATTGAAGGTTTTTTGATGTTTTTCATTGTCTAAATGTGCATCAAGTTCTGCTTCAAGCATATGTTCTACTGCTCGTTTGTGCATTTGTTTAAAAAATGAAGTTAAATCTTCTCCATTTTTAAAGGATTTGTAGAATTCCTTGTTGTTTAATAAGTTGTCTTTGTCTATCATAACTATGTAAATATATAAAATGTTAAAAAGTTATTTCCGAAAATTTTTGAGCTTTTTGAATTAGCTCAAATTTTCAGAATAACTTTTTAACTTACACACTTTGTGTTATACTGCCTGTTTTAGCTTATAATTACCAACCAAAAAAAGATATATCTTGTTCAGGTAAT # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGCTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTTCGAAATTCACTGGCAATTTTACGCTCTTTTCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //