Array 1 287622-289333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHYCA010000006.1 Halomonas sp. Y3S6 contig6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 287622 28 100.0 32 ............................ AGCCCGCCGACGATTCGGGCGAGCGGGAATGT 287682 28 100.0 32 ............................ AGCATCATCGACGCCACTGCCGTGAACGTTCT 287742 28 100.0 32 ............................ AGACCAAAGCAGTCGCAGCCCGAGCGGGCACG 287802 28 100.0 32 ............................ TATGAGCATGTCCAATGTTGAAGCCTTCGCTA 287862 28 100.0 32 ............................ AAGCACATGCTGCGTCTACGCCACGCCGGCAC 287922 28 100.0 32 ............................ ACCGGGCATGAGCTGGTCATCGTCGCCGGGGC 287982 28 100.0 32 ............................ ATGGCCGGTGAGCGGTGCGCGATAGCGCATTA 288042 28 100.0 32 ............................ GTCGTCGGCGAGCTGCTGCCGGCGATCGTCGA 288102 28 100.0 32 ............................ TTAACGCCTTCGATGTCGACGACGTCGCGCGC 288162 28 100.0 32 ............................ AAGCACATGCTGCGTCTACGCCACGCCGGCAC 288222 28 100.0 32 ............................ ACCGGGCATGAGCTGGTCATCGTCGCCGGGGC 288282 28 100.0 32 ............................ ATGGCCGGTGAGCGGTGCGCGATAGCGCATTA 288342 28 100.0 32 ............................ AGCACCGCCCGCTCACACTCGTGCTCCTCGGC 288402 28 100.0 32 ............................ TCTACGCCCTGCGTTCAGTCGGCCGCCTCGGC 288462 28 100.0 32 ............................ TGCTGAAGGCGACCCATGTGGCGCTGACCGGC 288522 28 100.0 32 ............................ ACCATCGAAGTCATCCAGGAAGAGCTGGAGGA 288582 28 100.0 32 ............................ TGGCAAGTGGAGCAGGGCCTTCGCAAGCTGAG 288642 28 100.0 32 ............................ ATTTCGTGAGGCGGTTAGTGGCAGATCCCAGA 288702 28 100.0 32 ............................ CGCTACTTCCGTGGTGGATGTCGCCCAGTCCT 288762 28 100.0 32 ............................ GCCTGAGCAGCATTGCCAATAGCGCCCCCGTA 288822 28 100.0 32 ............................ AATCAAACAAGTGGTGTGGCCGGTAAAGACAT 288882 28 100.0 32 ............................ TTGCTGTGGTGGCGGCAGTCCGGAGAGAACCA 288942 28 96.4 32 ...............T............ TGCTTCACCGAGCAGGGCTGCAAGGACTTCCT 289002 28 96.4 32 ..T......................... GCAGTGGTACCGCCGTCGATCGCCGCAGTGGC 289062 28 100.0 32 ............................ TGCTCTTGGGCAATGCGCCGCAGTTGACTGTG 289122 28 100.0 32 ............................ AGCCCTGCCACACCGCGTGATACTCGACCCAG 289182 28 100.0 32 ............................ AGGCCGATCATACGGGGTACTCATGAATGACC 289242 28 96.4 32 ........................T... GCGCAGTTCGGGCACGGTTAATGTCGTCACCT 289302 28 85.7 0 ..............G...C..G..T... | G,G,TG [289316,289321,289329] ========== ====== ====== ====== ============================ ================================ ================== 29 28 99.1 32 GTGAGCTGCCGCACAGGCAGCTCAGAAA # Left flank : GCGATTGGAGCAACTAATGGAGGTCTCGTGGCTCACCGGCATGCGCGACCACATCACGTTGGCATCCATTCAACCTGTGCCTGCCGATGCAAAGCACTGCGTCGTTCGGCGTCGACAGTTCAATACCGGAAGTCCTAGCCGGGCGAAGCGGTATGCACAACGACACAGCATCGAAGTCGAAGAAGCGCAGCGCTTGATGGAGGCACCTGCTTCCCGGCAGATCGCCCTGCCTTTCGTACAGGTCAGCAGCCGCTCAAGCGGACAGCGGTTTGCGCTCTTCATCGAGCATGGCCAGCCGCAGTCTCAGCCTATCGCGGGTCGCTTCAACCATTACGGGTTGAGCAGTGAGGCCACTGTGCCCTGGTTCTGACCCTTTTTTCAGAAGGTCACGCTAGGGCCTGTTAAATCAAGTTGTTACTGACGCCTCTCTGAAAAGGGAGGCGTTGCTCTTTCAAAGCATTGCTCTTTAACAATCAATCGCTTAACTTGAATACGCTCTA # Right flank : ACTTCCCCGACCTGTCCAGCCAGGGTGTCGAGCTGACGTCACGGCCCGCACGGGTTACGCAGCTCAAGTTCCTGGCTGTCGGATTTCGGAAAATACACCCCCTCTTTTCCTGCCTTCCATATGACAGATATTACCTTGTCTCGACTGGCATTGAAGCCGAGTTATCGAGTGGAAGCGTTGCGTCAGCGCCAGCTTCCTTGACAAAAAAAACCAGGAATTTTGCCGGTTCGGTGTCGCTCGCATTCCTGGATAAAGTATGAATGTCCGTAGGTGACTCATAAAAGGTTTGTCCAGCTTCTAACGTAACTACATCACCACCCTCCACCTGCATTTCTACCTTGCCGTTCAGTACATAAACGAAAACATGGGAATTATGACGGTGTGGTGCTGACATTCCCCCGGGCTCGTATTGCACAGTCAGCATCTTGACTTGGGGAGAGTCGGGCAAGCTAACGAGTGCTTCAGTCATGAGAGGGGTTATTTCCGCTCCCATGGCGGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGCTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCGCTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //