Array 1 91573-92009 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRC01000007.1 Eubacterium ramulus strain BIOML-A1 scaffold7_size170511, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 91573 26 100.0 43 .......................... GCTGTCGTATACCAGTCCTGTGTAACCGAAGTTTACAGCACCG 91642 26 100.0 43 .......................... GCTGTCATTGTACAGTCCTGTGTAACCAAAGTTAATCTGGCTG 91711 26 96.2 43 .....................T.... ACTGTCATATACCAGTCCTGTGCGTACAAATGTGATGGTGCTG 91780 26 84.6 40 ..T..................T.C.C ATTTGCTGTCAGACCAGTGTATGCAAATGTGATGGTTCCA 91846 26 100.0 43 .......................... CTTGTCATTGTACAGACCTGTGTAACCAAAATTGATATTGCCA 91915 26 96.2 43 .....................T.... GCTGTCATATACCAGACCTGTGTAGCCATAGTCGATGGTTCCG 91984 26 69.2 0 CCAA.C...............T.C.C | ========== ====== ====== ====== ========================== =========================================== ================== 7 26 92.3 43 TTCTCTACATACCACCAGCCACAGTT # Left flank : GTTCTGCCTGATTGGCGGAATCACCTGCATTAATATTTGCATTTCCGATATTCGCCAACTGATCCATGTCCATATCCAGCGTAGAGGAAAGCAGATACATCCGTGATGCATCCGCACGGTTCCTGTCCATGGGATTTTCCGGGGCTGTCTTTCCAAAAGAAATCATCAGCGCCAGAAACAGAGCCACAATTCCGGCTCCCGCCAGTGCTCCTCTTATTTTCTTTTTATTTTTTCTGTTTCTACTTCCCGGTCTGTTCATGAAATTCCCCTGTTTTTTTGACAAAAGCAGGTTTGTTCCGGCTGCAAAGTCCGAAACAAACCTGTTTTTTACTTCCTTGTGTCCATCTAAATGATGTGTATGCAATAATTGTCAGATAATTATTCGCAATCTGCCAACGCTACTTGCTTATTCACGTTAGAATCTGACTGCTCCTCCAACTACATTCCATACACCGTATGCATTTCTTACAGTTCCTGTATACCCAAAGTTGATGGCACCG # Right flank : CACACTCAGCGAGCCCTGTGTAATCAAAATCTACCGCACCGTCTTTGATGTACCACCAGCCGCATACACTGTCATTGTACAGACCTGTGTACTCAGCATCTACTTTGCCGGCTTTGACATAATGCCATCCGTAAACAGCATCGTTGTAAAGTCCGTTGTAAGTAGTATCTACTTCACCGTCTTTTAAGTAATAGAGACCGTCTTCTCTCTCCTGAAGACCTGTAAACTCTCTTGCTTTATCTCTGGTTGTTACATGTGCAGTCAGATCAACCGGAGCTGTGCTCTCATTGCCGTCCGTGAAATACAGACCTTTGATCGCTACTTCTACCGGATCATCTACATATTTTAATACTTTAAATTTTAATGCAAACGTTGCTTCCGAGAAGGTAGTATCTTTTGCAGATGTCAGGTAAGAGAAATTTCCTCCCGCAGTGGATACCATCGCTTTCTCCGGAAGATCTTTTTTCTCAAGTCCCTCAAATTCCAGTACAGTTTCATCG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTACATACCACCAGCCACAGTT # Alternate repeat : TTCTCTACATACCACCAGCCATAGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 6760-5806 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRC01000016.1 Eubacterium ramulus strain BIOML-A1 scaffold16_size59144, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6759 36 100.0 29 .................................... TGAGATGCTGCACTACGTAATGAGCATAG 6694 36 100.0 30 .................................... ATGAGGAAATTATGAAGAAATTTATAATTG 6628 36 100.0 29 .................................... TTTGGCCTTTTCTCGGACCTGGAAGCAGC 6563 36 100.0 30 .................................... TAAAAAATAACTTCATTTCCTCTTTTGATT 6497 36 100.0 30 .................................... AAACTATCCAGAAATAAGGATCATCATAAG 6431 36 100.0 30 .................................... TTTATATGGATTAAGACCAACTACTCCGAT 6365 36 100.0 30 .................................... ATCTTTGCATCTGACAGTCGCAGGAGTGCC 6299 36 100.0 29 .................................... TCGGTTGACATGTACAAGATCAATGCCCC 6234 36 100.0 30 .................................... CTATATGAGACGCACAAAAGAGCAATTAAC 6168 36 100.0 29 .................................... TTTACGTTTCACGGTTGGTTCAACCACCT 6103 36 97.2 30 .............A...................... TGAGATCATTTTTAAAAATGAAACCTTTTC 6037 36 100.0 30 .................................... CAAAATATGGATGTGTTGAAGGAAACAAGG 5971 36 100.0 29 .................................... TCTTGAATAGCTTATAAGATAAAGATATA 5906 36 97.2 29 ..............................T..... ACCACGTCCATCTTCCGGTCCTGCATCTA 5841 36 91.7 0 .C.........................A..T..... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 99.1 30 GTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Left flank : AATAAGAAAATACTGGGTAAGTTGTTTCAGGAATTGAAAACTGTTTCGATGGAAGAGCAGTATGCAGAAATATGTGAATTGAATGCTAAAGTTGTTCATTATTTGGATGATTTAAATTTAAAAATGCCATATCCGATTCAATTTCGACTGGAGTTAGATGTACTTGATCTTTATAAAATATATGGGGTTCAGTTGGATACAGAAGAAAGTGATATGTTTGAACGGCTCTTGGAGTATGTCAAAGTACTGAAATCATTGTGTGGAATTCGCTTGCTGGTATTTATAAATGTGAAAAATTATTTGTCAGAAATGCAGATAAAAGAATTGTACAAAACAGCATTTTATTATAAAATAAATTTATTATTAGTTGAGGCACATCAAGGGAAAAATTTAGAATGTGAAAAAAATCAATTAATAGATGAAGACATGTGTTTTATACATTACTAGGTGGCTTACGCATATTGACCGATATGTTCGGTTCGGTGATGATCTCATTTGAG # Right flank : GTTTATGAGAAAATCATAACCGTAGACACTGTTTGAGAAGCAATGTTTTCTCGGCTGGTAAAATAGCTTTCCGAAAAAGAGGGCGTAACGGAAGCCCTCAAAGCGGAAAATCAAATGCTGTGGGTGCAGAGGATGAACAACATTCGCAGTGTTACTATGGAAATCGTTTTGAGTGAGCTTATATACTGTTAATACTATGCAAGAAAAGTCGCTGTCAACAGACGGCGGCTTTTCCTTTTCGGGTAGTATTCAAGAAGTCATAAAGTTCTGTGAGTAATGGAAGAAGCCGGCGTTTGCGGAAAAGTCACAATTTACGGAGGTAAAGCTTCAAATACACTTGCCTTTTTGTTCTTACTATGATATTATTAGTACACATACTAAAACATTTGATGGGAGGTGATGTATTTGCGGAGAGATAGCAGTGAAACAAAGAGGAAAATACTGACCGTGTGCGTCCGTCTCTTTTTGGAGCAAGGGTATAAAAACACCTCTGTCAGTCA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCTTGTAAGTTTGTAATGGTGCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //