Array 1 3814192-3813125 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP032760.1 Halocella sp. SP3-1 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	=====================================	=======================================	==================
   3814191	    37	 100.0	    37	.....................................	AGGGGATAACTTTATGCTACCCCCCCTGTATTGTTAG  	
   3814117	    37	 100.0	    35	.....................................	GAACAAGATGTTAAGAAGGGTGAAGAAATAAGTAA    	
   3814045	    37	 100.0	    36	.....................................	ACCTTGAAGCCTTTGAAAGACAACGACAGACTCTGA   	
   3813972	    37	 100.0	    36	.....................................	TCAGACAGTTTAAATATTTTACTCTTGTTATTTAGA   	
   3813899	    37	 100.0	    36	.....................................	TTTTTTATGTGTCCGAAGAAAGATGGGAAGATCTTG   	
   3813826	    37	 100.0	    38	.....................................	GCATTACTTCTTTCATATCACAATTACACGCTATACTA 	
   3813751	    37	 100.0	    37	.....................................	AGAAATGGCACTTGCAAATAGGTGAGCCGAAATGGTA  	
   3813677	    37	 100.0	    36	.....................................	GTGTCAAGATGATGTACTATGAGAGCAAAAGGCTTA   	
   3813604	    37	 100.0	    35	.....................................	CAACTTCGCCGGAAGGAGACACTTCTGACTTTTAT    	
   3813532	    37	 100.0	    36	.....................................	AAGAAGGAGAAATCAGAAAATCAGGAGGTACTTGGT   	
   3813459	    37	 100.0	    38	.....................................	ACCTGTTCTTCCATATCAGCAGTAGCTGGATGATAGGA 	
   3813384	    37	 100.0	    39	.....................................	AAGTCCTCTCAGTCTTTCCTATCATCAGTAGATCACCAG	
   3813308	    37	 100.0	    37	.....................................	ATGAGATATGGGACAGGAGAAACAAAGACTATATCAT  	
   3813234	    37	 100.0	    36	.....................................	CTTCTTCAATTCCTATATTATTTCTAATGGCCCATT   	
   3813161	    37	 100.0	     0	.....................................	|                                      	
==========	======	======	======	=====================================	=======================================	==================
        15	    37	 100.0	    37	GTTTAAATAATAAATCCACTATAATAAGGATTGAAAC	                                       	       

# Left flank :   CAGGTTTATAGAAGTAAATATATAAAGGCGGTAGAAAAAGATAAGAGGAAATTCTTTAAATCTGTAATCATCGGAAATATTTTAAGTTTTGCTAAAGGAATTGATTGGTGGGTTGAAGAAGATATTAAAGTAGTACCATCTTTATCAGATATTACAGTCAAATTCAAAGGAGAAGAGATGTTGGGTTTTACTGGCTATTTTTTTTCCAATGTATATTTACCTGAATATATAGGCTTAGGCAAATCTACTAGTCGAGGGTTTGGTACAATTTCAAGAGAAAAAGTAATCTAAAGAAGCAATTCTGAAGGAAAATTATTGATGAATAAATATACAGTAGTCGATGATTACAGTCATATTAGTATTTGGTTGGTGATTTCATTTTGCGGCAAAACTATCAAAACAGGGGTAAAATTTATAAATATACAGTAATAAAGGAGGGAGTTATCTTCTCAAGAGTTATTGATGATTGCTGTTATATAAGTGTTCTTGCTCCGTGACGG
# Right flank :  TATTCCGAGTGAAACTGTTGTTATTATACAAAAAACATTGGATTAAAGGTTGTGGTGATTCTGTACAGTTGTATCTGCCTAGTCCTTCATTTTGCTTCATATTTCCTGATTTCAACTTTTTAGTTTGATAAGTTTGAATGTGAAAAGATTTCAATTCTTTCAACTAATCTTTCAGGATACCTTCATATAATCTTCCATAATTTATTACCTCATAAGTATGTTTTTTACCTATCAAGACAATAATATATTAAATAAATTTCCTACAATTCGGCTTTAAATGATAGTATTGCTGTTCTTTATGATACTTGTGGATGGAATTGGATATGGTCCCACCGAAAATAGTAATTGCTCGGATATTGTTTTGGCTTGGGCAATCTAATAGTCGATATTAAATTGAGGAAGAGTTGAAAAAAGATTGATATGGTTATATTAAGATGAGAGAATCATATAATTTTTTGATATAGAATCGGGTATAGCATAGAGTATTATTGTTAAAAAAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTAAATAATAAATCCACTATAATAAGGATTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:78.38%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-3.30,-2.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.5   Confidence: HIGH] 

# Array family : NA
//