Array 1 168436-166545 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQG010000008.1 Enterobacter cloacae complex sp. P21RS contig_0008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 168435 28 100.0 33 ............................ GCAGCCGGTCACGGTGACCATCCCGACGCAGAG 168374 28 100.0 31 ............................ GTCCGGGCATTATTTACGATATGCGTGACCA 168315 28 100.0 32 ............................ CATCCTGGTCGCCATCGTCGGGGACAACATCG 168255 28 100.0 32 ............................ AACGCCGTTGCAGGATAACGGCTCAACGGTTC 168195 28 100.0 32 ............................ AAATTTCGTTAAGCTCCGGGTAGTTGAGCATT 168135 28 100.0 32 ............................ GATGCGATTTGCTGCGCTGAGGTATCGCAGAA 168075 28 100.0 32 ............................ GATATCCAAACAGCCCAGGTCTGAATAAACTG 168015 28 100.0 32 ............................ TAGAGCAGCGTTATTTCACGCTCTCGTTTTCG 167955 28 100.0 32 ............................ ATTGGCTTATTGAATCCGTATGTCTTGCGCAT 167895 28 100.0 32 ............................ TAATTCTTTCGTTCATCCCGACTACGGGATAA 167835 28 100.0 32 ............................ AAGACAGCTTAACATTAGCTAAGACGGCTAAT 167775 28 100.0 32 ............................ TTTTGCGGCGCAGATATGCGTGTGATGAATAC 167715 28 100.0 32 ............................ TTACCAGGACAAAATGCACAAAAACATACTAC 167655 28 100.0 32 ............................ AATGCACCACTCGTACGACCACGACGAAGGGT 167595 28 100.0 32 ............................ TATACAGTTACAGACGCGATAAGAGACGAGCA 167535 28 100.0 32 ............................ TGTATAACTTGCCCCGCGTGCTCGTCGTCAAT 167475 28 100.0 32 ............................ AGCACGCCCTCCAGGTCTCCGATAAGCACATT 167415 28 100.0 32 ............................ GCGTTCGTTATCTGCGCATATTCTGCGGTTGG 167355 28 100.0 32 ............................ ACAACCAAAAACAAGGCGGCAGGATGAACCAA 167295 28 100.0 32 ............................ AGGGAGGAAAGGAGGAGGGGATGGAAACCGAA 167235 28 100.0 32 ............................ GTCGCGCTCAACCATTTTCCGGCGCTGTGCTG 167175 28 100.0 32 ............................ GTACATCTATGATGCGGTATTTGCTCCCCTGC 167115 28 100.0 32 ............................ TGGCGAACCTTGCATCAGAGAAGTCTTTTTAT 167055 28 100.0 32 ............................ GCGTTCGTATGCGCTGGTCGCCTGATAATCAT 166995 28 100.0 33 ............................ TGAACGTGACGCGCACGCGTGGGGGGGACATCT 166934 28 100.0 32 ............................ AGGTTCCGTTGACGTAGTTGTACGTAAGTGCT 166874 28 100.0 32 ............................ GCATAACTTTCGTCGTACGCATCTCGGGAACG 166814 28 100.0 33 ............................ GAAAAAAACAACCCAACCATTAACAACATTGAG 166753 28 96.4 33 .....T...................... GACGATCTGGAAGAAGCGGCAGCCCTCGCTAAT 166692 28 96.4 32 ................A........... TTCAATCGAATTAACCGACAGTACCGGGAGTA 166632 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [166607] 166572 28 71.4 0 ......C.T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 32 28 98.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGTATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATTGGTTTTTTTTTGTGCAGGGTGGTTTGTGAGAAGAACAATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACAACAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 179764-177992 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBQG010000008.1 Enterobacter cloacae complex sp. P21RS contig_0008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 179763 28 100.0 32 ............................ ACTGGCACCTGCCCCAGCATCCCAAAGATAGG 179703 28 100.0 32 ............................ TGGCGCACAGAGGGCGAGGCGCACGGCTACCG 179643 28 100.0 32 ............................ TGCGCGAAACCAGACCAGCGCACGCGGGACGG 179583 28 100.0 32 ............................ GTCCCGGCGGGGTTAGCCGGGATGGTCGCAGC 179523 28 100.0 32 ............................ AGGGCGATTTCAAACACGCGCTTATTCATCAG 179463 28 100.0 32 ............................ ATGACGCTGGCAACCGCCTTGCCGTTGATCAT 179403 28 100.0 32 ............................ GAACAGGCAGCAGAGCCCGCCCCGCGCGGGCT 179343 28 100.0 32 ............................ GGGGCAGGTTCCAGTAGGCAAGCAGTACGATT 179283 28 100.0 32 ............................ GACGAGCGAAACCGCCGATTTTACGGCGTACA 179223 28 96.4 32 .....A...................... CGCCAGACGTGGGGCGAGCAGGTAAGCGCAAT 179163 28 100.0 32 ............................ TTGTCAGTCTGATGAAAATAAAGGGCCAATGC 179103 28 100.0 32 ............................ AGCATCGAATCCAGCGGCGTGTTAGACGTGGC 179043 28 100.0 32 ............................ TAAGAAGGAGTATTTCCCGCTATACAGCGAAG 178983 28 100.0 32 ............................ GGTGAATATGTCCCGCCACTGGCCGTGGAAGT 178923 28 100.0 32 ............................ TCTTTTTGCTCCTTTTTGTCATCCGTTGACAT 178863 28 100.0 32 ............................ CGCGAGGCCGCCGCAGCTCTTGGGATTAACCC 178803 28 100.0 32 ............................ AGCTGTTCGCCGGTCATTGGTTTATTGGCTGT 178743 28 100.0 33 ............................ GGTTGCAGCATAGTGCTTAAGTGCATCAGTTTT 178682 28 100.0 32 ............................ TCATGGGGGTGGCCTGACAATGCTGAATTTTT 178622 28 100.0 32 ............................ TTGTGAAGCACTATGGCGGTAACTACCAAGGA 178562 28 96.4 33 ....................T....... AAATCGAAGCGAGTGGGAAAAGAACAGTCACAA 178501 28 100.0 32 ............................ TGTCATATCGCCAATACTGATTGATCGACTTT 178441 28 100.0 32 ............................ GTGAACAACATTGAGCTGAGGTTGCAGTTAAT 178381 28 100.0 33 ............................ CACCAGCTGCATCCATGCCCCGAACCCCAAAAT 178320 28 100.0 32 ............................ TCGAGCGTCATCGTTGGGGTTGATTTGGATTT 178260 28 96.4 32 ..........T................. TGCATTGCTTCTGCGTGGATTTGATCGAGGGT 178200 28 100.0 32 ............................ CGACGCGATTCAGGTCACCGGCACAAGTCAGT 178140 28 100.0 32 ............................ CTGCGGAGCGGGGGGACCAACTTCTGAGGCGC 178080 28 100.0 33 ............................ CGTGTCGGAAGAGGGACAGGGAAACGGGGCGTT 178019 28 92.9 0 ................T......T.... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCTTCTTACAGGACTGCTCCATGACATCACGCATTCTATGGTTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGAAGTAGGCCCCTGACGCCACCGGCTAGACCCTTTTTTTTTATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCAGGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : GCCCCTCTGGGCTTTAATGCCGTGGAAATAGCGTTACTGTCCCATAGACAGTACAAGTAAACCCATTCCTCACAAATATTCATCTCGTCTATTTAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATGTTGTATTTTTGTTGAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATATCCGCATTCATTACCTTGAAATAAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGGAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //