Array 1 226662-229311 **** Predicted by CRISPRDetect 2.4 *** >NZ_SEKF01000001.1 Klebsiella pneumoniae strain GEN000187 GEN000187_S75_R1__paired__contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226662 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 226723 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 226784 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 226845 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 226907 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 226968 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 227029 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 227090 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 227151 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 227212 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 227273 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 227334 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 227395 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 227456 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 227517 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 227578 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 227639 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 227700 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 227761 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 227822 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 227883 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 227944 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 228005 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 228066 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 228127 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 228188 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 228249 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 228310 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 228371 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 228432 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 228493 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 228554 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 228615 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 228676 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 228737 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 228798 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 228859 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 228920 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 228981 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 229042 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 229103 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 229164 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 229225 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 229283 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //