Array 1 21374-20444 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JH417487.1 Hafnia alvei ATCC 51873 Scfld16, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
     21373	    28	 100.0	    32	............................	GCATATGCCGAAATGGTATTTGGAGCCGTAAC  	
     21313	    28	 100.0	    32	............................	ATATAAAGCCAAACCAAATCACTGGCTTTTCC  	
     21253	    28	 100.0	    32	............................	AACAAGAGCCGTTTTACACCGCTGGAATGGTT  	
     21193	    28	 100.0	    32	............................	ATAGAATTACCGATCGCTTTATAGCGCGGTCC  	
     21133	    28	 100.0	    32	............................	GCTAACATTCTCTTTACAGGCAGTAAGAGCTA  	
     21073	    28	 100.0	    32	............................	AAACATAGATGCTCCTAACCCCGCTATACTTG  	
     21013	    28	 100.0	    32	............................	AGACAACACTGGGAAGGTAACGCTCGGTAGCT  	
     20953	    28	 100.0	    32	............................	ATGTCCAATATGAATGCTTGAATGGTTAAGCT  	
     20893	    28	  96.4	    32	............G...............	ACATTTACATGCAAATTCACTTCGATTGAAGT  	
     20833	    28	 100.0	    32	............................	GGCTACGATGGTTCGCTACAGCTTACACAGCC  	
     20773	    28	 100.0	    32	............................	ATTCATTGACAAGATCATTCCAGCCGTTAAGG  	
     20713	    28	  96.4	    32	............G...............	CTTGGCTTTGCTAACGCTTCGAGTTCGACGGG  	
     20653	    28	 100.0	    32	............................	ATGCTTGATAAGATGTTGAGCCAGCGTGATAA  	
     20593	    28	  96.4	    34	............G...............	GAAGACGCTCGGCGGCGTGGAGTATAAGCCATGT	
     20531	    28	  92.9	    32	TC..........................	TCACATACCGCCAGTTACTCGATAAGCACTCA  	
     20471	    28	  96.4	     0	....................T.......	|                                 	
==========	======	======	======	============================	==================================	==================
        16	    28	  98.7	    32	GTTCACTGCCGTACAGGCAGCTTAGAAA	                                  	       

# Left flank :   TACACAATGCAGCGACATCCAACGGATCCCTGAGAATGTGATGCATTGCACCGTGAGCCGAGTGCAGGTGAAAAGCAGTGCGGAACGACTGCGGCGCAGATCGGTTAAAAAAGGCTGGCTCACCGAGGAACAGGCGCGGGAGCAAATTCTGGATGCCAACGAGCAGCGCACCTCATTGCCCTTTATTTCGTTGAAAAGCCTATCCACTGGGCAAATGTTCCAGCTGTTTATCCGCCAAGGGAAAGCGCAGCCTCATCCTCAGACGGGAACCTTCAGTAGCTACGGCTTAAGCTCAACCGCCACTGTACCGTGGTTTTAGTTTTGTTGGTTTTCAACGCCCGCCTGAAACCAGTCGGGCGCTTCAGCTAAAACCCTTTTTTATTGCTTGCTCGTAACTTATTGATTTTCAATCATCATGGATGATGCAAAATAAAAAGGGTTTTATAAAGAGTAACGGGCTATTGTTTTGATTTATCGAATCTTTCTACGATTATTCTACA
# Right flank :  GTGCTTTCACAAGTTTGTAGCCTAGGCTACAAACTCACGGCCGTTCTTTTACCGCATCCGCAATGATTTAGCCTATCTCAGTCTGCAAAGGCTAATAGCTGGCGCGTGTAGTCTTGAGCTGGATTGGCAAAAACTTCAGCGCAGTTTCCGTGCTCAATCACTTTTCCGTTCCGCATCACCATCACCTGATGGCACAGTGATCGCACCACCTGCAAGTCGTGGCTGATGAACAGGTAGCTGAGCTGGTGGCGTTGCTGAAGCGTTTTCAGCAGCGTTAAAATCTGCGCCTGCACGGAGCGATCGAGCGAAGAGGTCGGTTCGTCCAGTATCAATAACCGAGGTTCAAGAATTAAGGCGCGGGCAATGGCAATACGCTGACGCTGACCGCCGGAAAACTCGGTGGGGTAGCGATAGCGTGTTTCTGGATCGAGCCCAACTTCGTTCATAGCGCTGATTACCCGCTCTTCCCGTTGCTGTTCGTTCAGCTTTTGGTGTACCTG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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