Array 1 2328470-2327048 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_010999.1 Lacticaseibacillus paracasei, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   2328469	    36	 100.0	    30	....................................	TGTTTTCTCCAGAACAACAGCTTAGACGGC	
   2328403	    36	 100.0	    30	....................................	TGACATTGTGGGTATGCAACAAATCACCCC	
   2328337	    36	 100.0	    30	....................................	GAAACTTGACAAAAACAATCTTATCTACTG	
   2328271	    36	 100.0	    30	....................................	GAATATCATAATGCGGACGACCCATTACCA	
   2328205	    36	 100.0	    30	....................................	AAAAGCCGGTGCAATATGCACCGGCTCACT	
   2328139	    36	 100.0	    30	....................................	GCACTGATGAAACCGCACAACAGTTGACCG	
   2328073	    36	 100.0	    30	....................................	GATCGCGGCACGATTGTAAACGAAGAAACC	
   2328007	    36	 100.0	    30	....................................	CCAAATTGGTTAGCACCGCTTAAAGACGAA	
   2327941	    36	 100.0	    30	....................................	TATCAGAGGCTTATCCATTAAACAACTGGC	
   2327875	    36	 100.0	    30	....................................	AAACTGCCTTCCGTTGCGATCAACTCGCGC	
   2327809	    36	 100.0	    30	....................................	AAGCGTTCGCTTGCGCTGGTGTTGGTCTCG	
   2327743	    36	 100.0	    30	....................................	TCGTAGCGGCTAACACGCTTATGGCTGACA	
   2327677	    36	 100.0	    30	....................................	AAAATATTTCTAGAATTAGCAACTTTATGG	
   2327611	    36	 100.0	    30	....................................	GATCGTTGAAGAAAGGCTGATCAATATGTT	
   2327545	    36	 100.0	    30	....................................	CGCAAAAAATGTTTTGACAAGAACACATCG	
   2327479	    36	 100.0	    30	....................................	GGCCAATATCATCAGTCGGGAGATTGTCGC	
   2327413	    36	 100.0	    30	....................................	ACTCGTCAATATCCTTCTGCATGATCAAGT	
   2327347	    36	 100.0	    30	....................................	GCAATCGCGATACTTTCACCGATTGCAACA	
   2327281	    36	 100.0	    30	....................................	AACAAAATAATAGGAGGTTTTTACCATGGA	
   2327215	    36	 100.0	    30	....................................	ATGACTTTAACAATCAAATCCCAAGTTGTT	
   2327149	    36	 100.0	    30	....................................	TATTATCCTAACACATCCATCGAGAAGTTA	
   2327083	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        22	    36	 100.0	    30	GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	                              	       

# Left flank :   AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGCGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAACCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTTAGTCATTATTTAAGTGCCAGAGACTTTTCGTCGGTGACTGAACAGATCGGTGATACTGAACTTCAAGTCGTTCTCATCGAATTCTCAAAGGTGAACAGAAAGAAGTACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGACAATCGCGAACTAGATTGATTAGGAGATTGTGTGAAAACACAG
# Right flank :  TGAATATTCTAATGTTGTTGGATTGAAGTCAATATTTGAGACAGATTTTAAGAGACATTCAGAACCGCGTTTACCTTCCACAGCTCAAATAAATCATCAATTGCGATTAATAACTTATTTGAACCCTGGAAAGCATTAAGTCAGGCGGCCATTTGGCTCGTAAGTGTTGCAATTTCAACTTGTAAGGGGGTCTGGTAGCCCAGTGAACTATGAATTCTCTTCCTATTGTAGAAAGCATGCACATATTCAAAAAGGACGGCAGCGGCAGTTTCATAATCTTCAAAGACCGGCACTGGATAAACACATTCCTTTTTGAGGGAAGCGTGAAAGGATTCCATTGGCGCATTATCATACGGACAACCCTTACGGCTGTATGAGTGGCGGATATGTAGTTCAGTTAAACGTTGATTGTAATCATCGCTGGTATACTGTGATCCTAAATCCGTATGGATAATCAGGTCCCCAGTAATGGTTCGATTTTTAACCGCGCTTTCAAGGGC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.87   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//