Array 1 44246-38951 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFREH010000005.1 Faecalibacterium sp. Marseille-Q3530 NODE_5_length_158695_cov_29.5707, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 44245 33 97.0 35 ...........T..................... ACTCCAAGCGCACCGCAGCACCGACGAAACCGTCG 44177 33 97.0 35 ...........T..................... GTTCAGTGCCCGCTTAAAATCGCCCTGCGCGGCCG 44109 33 97.0 33 ...........T..................... GCCGTAGGTCATGACGGCATAAGAGCGGGCCTT 44043 33 97.0 35 ...........T..................... ATATCGCTCATACGTCAGATAACTTACCATTGGCA 43975 33 97.0 33 ...........T..................... AATGCACTGATTCGTCAGCTTGCCGTACACGTC 43909 33 97.0 33 ...........T..................... ACGAAGTCGTTCACAGAACACGGCTATATCATC 43843 33 97.0 34 ...........T..................... GAGACCGGTGTACAGCAGAGCGTAGAAGCCCCAC 43776 33 97.0 35 ...........T..................... GTGATTTCGGATATTGTCCTGAACAACAATTTTGG 43708 33 97.0 34 ...........T..................... ACACGGCTTTCCAGCTTGGCGGTGAACATGTTAT 43641 33 97.0 36 ...........T..................... GACATGGAAATCGACAAGAGCAAGCTGTCCCCCGAG 43572 33 97.0 35 ............A.................... GTGAAAAGCCACCTTGAACCCATCTGGCAGCAGGC 43504 33 97.0 33 ............A.................... TCCGCTGCGCGGTCAGCAGGGGTGCGGCCGGAG 43438 33 97.0 34 ............A.................... GATTTGCCCGGCGGGGCAGTGGGGCGGGGTCGCT 43371 33 97.0 35 ............A.................... TGGCTGCATCAACGATGCAGGCCCAAGAGCAAGCG 43303 33 97.0 35 ............A.................... TTCTTGGAGCTGCAAGGCGATGCCGATGTGGCGGG 43235 33 97.0 34 ............A.................... GGATGACGTAGCCCGACAAGAGGCACTCCGAAAG 43168 33 97.0 33 ............A.................... ATTTGTTCTCCAAAAGTCCCAAATATTCTTCGA 43102 33 97.0 35 ............A.................... ACCAACGCACAACAGCGGGCTGCAGCAGCCATCAC 43034 33 97.0 36 ............A.................... TGTTGGTGTGGCCTAGCTTTTCGGCTCGTTGGGGGG 42965 33 97.0 34 ............A.................... ATCTTTTTGCCGGTTTGGGATTTCCGGAGCTTTG 42898 33 97.0 33 ............A.................... CTAAAATTGACAACTCGGAGTCGTTGTGATAAT 42832 33 97.0 35 ............A.................... CACGCAATAACGGAATTATCAATAGCCTGCTGTAC 42764 33 97.0 35 .........................G....... ATGATAGAAACAAAAACTACATTTGCAATTTCCAA 42696 33 97.0 35 .........................G....... ATGTCCTGATACTCCGGGTCCTCCGGGGTCAGGGC 42628 33 97.0 33 .........................G....... TCCGAACGAATGCGTCAGGGTACGCCGCTTTGA 42562 33 97.0 35 .........................G....... GGCCGAGAGGATGATGCTCCGGGTCTGGAACGTCT 42494 33 97.0 34 .........................G....... AATGCACGTTTCAGACGTTAGATAATTACGAATC 42427 33 97.0 35 .........................G....... ACGGAAGATGGACGTATTGCCCGGATTTGCGTAGT 42359 33 97.0 34 .........................G....... TTTTGTCATTCGAACCCTCTTTCCTTGTCCATCT 42292 33 97.0 34 .........................G....... TTCCGATCTCCACACAAGACGGCATAGACATGAC 42225 33 97.0 33 .........................G....... AGCATAAAGCTCTGGTACGTCTTGGAGCCGAAG 42159 33 97.0 35 .........................G....... CAGATAGTCGGACACACCGACACTCCAGTTATACG 42091 33 97.0 35 .........................G....... GCTTTGGAATTTTTGCATCCCGCACGGGATTGTGC 42023 33 97.0 34 .........................G....... GTGCCTTCGGCATGGTAATAGACACCGTCGCAGC 41956 33 97.0 35 .........................G....... TTGAACTCCCGGAGGCACAGCCAGATGACGTGGAG 41888 33 97.0 35 .........................G....... TTGAACTCCCGGAGGCACAGCCAGATGACGTGGAG 41820 33 97.0 35 .........................G....... GTTCGGCATCTGGATCGTGACGTCCGTGGCGTTGC 41752 33 97.0 33 .........................G....... TCCGTGGTGTGCGTTGCCTTGTTCGGGTCAAGC 41686 33 97.0 35 .........................G....... ATGATATTTCGGACCTGCTGGCAAGTTACCAGCAA 41618 33 97.0 34 ...........T..................... ACGCACAAAAGAAGGTGCAAATGGGGATGAAACG 41551 33 93.9 34 ............A..........A......... TTGTAGGCCACGCCTTGCAAAATCGGCTGTTCTC 41484 33 93.9 33 ............A..........A......... AGCAATAGACCCCCTGCCCAGTGGGCAGGGGGT 41418 33 97.0 36 ............A.................... GATGTTGTCCACGTCCCAGTTCTGTGTTCTGATCGT 41349 33 100.0 33 ................................. TTGGAGGACGACGATTTTTTGCTTTTGGACCGC 41283 33 100.0 34 ................................. TTGAGAATCTGATAATCGGTATCAATGTCCGACA 41216 33 100.0 34 ................................. TGTTGAGCTGCCCGCTGAAGCCTGATAAGCTGAC 41149 33 100.0 35 ................................. AATCGGGGGGATTCCAGCATACTCATAATGCGGTT 41081 33 100.0 36 ................................. TTGTCCAGCTTGGCTGCATAAGCCAGAGCCTTGCAG 41012 33 100.0 34 ................................. TCCTGTTGAAAATCCGCAGATGAAGCTGTACGCC 40945 33 97.0 35 ............A.................... TTCGACGATCTGCGCACCGAGATCAAGCGCCAGGG 40877 33 97.0 36 ............A.................... GTACCATTCGATTCTGAAGTGCGGAACGCTGGGCGG 40808 33 97.0 35 ............A.................... ACGCCGAGGTCTACGATCTGGCTGAACACCCCCGC 40740 33 97.0 35 ............A.................... GTCGATGTGATGGCCTACGCCATGGCCCACTCCAA 40672 33 100.0 36 ................................. ACTCCTGTGCAACGACGGCCGCAGCAAACCTCGCAC 40603 33 97.0 35 ............A.................... AGGAGGACGAAATTATGAAAATGGTGAACGCAAAG 40535 33 100.0 35 ................................. TTCTAACCTTATTGCGTTTCCCAGGCTTGAAGAAG 40467 33 100.0 34 ................................. GAGCGGAACTATTCGGAATGCACCCGCCTGGGCA 40400 33 100.0 34 ................................. ACCTCATTGCGATGGAGAGACAGCCGATGGAAAT 40333 33 100.0 35 ................................. ACGAAACGACAAAGGGAAAGACTGGCATTCCTGCA 40265 33 100.0 34 ................................. GTCCTTGTAGTCCATCAGGCCTCAACCTCCTGCG 40198 33 100.0 34 ................................. GGTAATCATATTGGGAATCCGAACCCTTAAAACG 40131 33 100.0 35 ................................. ATGAGCTGGGACGACAACACGTTCATTCAGACCTA 40063 33 100.0 34 ................................. TGCCACCTGCCGCCAGTGGTGGGGATGGGTCAGG 39996 33 100.0 34 ................................. TTCAAGCGGTTTTCGGACACGGCAGACACGATGG 39929 33 100.0 34 ................................. GCATGGACGACGCATCGGACGTATTGTACCGGGC 39862 33 100.0 35 ................................. TCTTGACGAAGGCCGGGCCAGCCCAGCCGCAGTCC 39794 33 100.0 35 ................................. TCTTGACGAAGGCCGGGCCAGCCCAGCCGCAGTCC 39726 33 100.0 34 ................................. CATTGTGCCTTTGACGTAGGACTTGGCGATGGCA 39659 33 100.0 35 ................................. CTCCCCCGCGTTGCTCTTGGGGCCCATCGTTGATG 39591 33 100.0 34 ................................. CAGACGGCCTGCCGCGTCCTATGGCGCGTCGGGT 39524 33 100.0 34 ................................. AGACGAGGCCGAAATGAAGCGCCAGATCCAGCGG 39457 33 100.0 35 ................................. CGCGTAATCGTGGGCGGCGTCTCTCCTGCCGTCCC 39389 33 100.0 35 ................................. TCATCAAGGAACGGCCTCATGGATTCAAAGGCAAC 39321 33 100.0 35 ................................. AGCTGAGGGAGGCCCAGTTCCTTTGTTGTGGGATC 39253 33 100.0 35 ................................. GGCTCCATCCTGAAGCAGCAGCGTTGCAAGCGCGG 39185 33 97.0 34 .....................A........... GACAAGGACAACTGGACGGCGGGCGGTGCGCAGT 39118 33 97.0 35 ............A.................... ATCAGCTCCGGGTCGTCCAGCTTTGGGTACTGGAG 39050 33 100.0 34 ................................. TTTCTGGATGGAGGTCAAGCCTTCCAGCCGCTTG 38983 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 79 33 98.0 34 GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Left flank : CCATTCTTCTGGAAGTGAGGTTCGTCTATGCTGGTCCTGATCACCTATGATGTCAACACCGAGACCGCTGCTGGGCGCAAACGCCTGCGCAAAGTCGCCAAAAAGTGCGTGGACCACGGGCAGCGGGTGCAGAATTCTGTCTTCGAGTGCCTGCTGGACGCCGCGCAGTTTGCTGTTCTGAAGTCCGAGCTTTCCGCCCTCATCGACCCCGATCTGGACAGTCTGCGGTTTTATCAACTGGGCAACAACTATAAGACCAAGGTCGAGCACATCGGGGTGCATCCCCTGTTTGAATCCGGAGACGTGCTGATTTTCTAGCCCTCTCCCTCGGTGCGAATGGAAAGCACTCACCCCTTTTCCGTCTCCTTCGCACCATGTTTTCAAGCCGTTCTGTGCAGATCGCAGCTGTTTTTTCGGATGTTTTTGGACAAGCTCTTCCAAATCTGTGCAGATCGTTTTATAATGAAACAAAAGCGGAGATGTTTTTCTCCGTTTTTGCT # Right flank : TCCTTGCCCCAGCTAACAGCGTATTCTGCCCTGCATCCCGGCATCGCCAACCTTTCCCCCATTGGCCTCATCGTGCGCGGTACAAAACAAAAGCAAAAGGCGGCATGACCCGTTGTATGGGCCACACCGCCTTTTGCTTCAAGGCTCGTTTGCCTGCAGTACACAGGCACAATACCCCGGTTCGGGCTGATAGCAGTGGATGGTCAGGTATTTGTCCACCTCCGGGCTGTAATCGTGGAGGGTATGCTTCGTACCGTTCAGCGCCACATCTGCATAGGACACCAGCCACTTTTTGTCCCCATTGGGGAACACCTTGTAAAACGAGCGATTCAGCATTTCCTCCACCGGCACACCTTCGATATTGGCCATTTCCGCATTGCAATAGCGGAAGATGAAATCCACGCCGCGTCCGTCCTCATTGAAGACCAGTTCGATGACACAGAACGCCAGCGGCATATCGTCCAGCAGGCTGCATTTTTCCAGCAGGCTCATGCTCATGG # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Alternate repeat : GTCGCCCTCCTCACGGAGGGCGTGGATAGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.50,-8.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //