Array 1 2384110-2387933 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065377.1 Faecalibacterium prausnitzii strain Fp77 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 2384110 33 100.0 35 ................................. AGCTATCCCTGCGGCGATTGCGGCAAGGAGACCAC 2384178 33 100.0 35 ................................. TTCAAAAAATCGTTCCCGCTGGGTTCGGGCCGGTC 2384246 33 100.0 33 ................................. AATCAAAATCGGAGGATAGTATTCTTGTAAGGC 2384312 33 100.0 35 ................................. CAACATCGCCCGCCTGAAAAAAGGCAAGGCTCCCC 2384380 33 100.0 34 ................................. GTCATTGCTGGCGTCCCCTTTCAAGATCCAGACC 2384447 33 100.0 35 ................................. AGGAATCTGCCGCCGCCCTCGGTGTGCTGGCCAAC 2384515 33 100.0 35 ................................. CCGAAAGGAGTGATTCATCCCATGAGCAAAGAATC 2384583 33 100.0 35 ................................. ATCGACAACCTGGGCAGTATTTTTGACAGCAACGT 2384651 33 100.0 35 ................................. TCGACCAGAGAGCGACAGTAGGAGCAGGCGTCCCG 2384719 33 100.0 35 ................................. GGCAGGGGAGTGGCAAGCCCTACTGTTCCCATGCC 2384787 33 100.0 36 ................................. ATCCGCCAGCTGGGTGAGCTTGTCGCACACAGCTCG 2384856 33 97.0 35 .........T....................... CATCTGGCCGCTCAGCCCGCGCACTGCGTCGCGCA 2384924 33 100.0 36 ................................. TTGAGCTCTTCCCAGGTCTTGATCGCCGAGGTCCAG 2384993 33 100.0 36 ................................. TCGCAGTTTGTCCTCGACCTCGATACGAAACTGGGC 2385062 33 100.0 34 ................................. TCAGGCATGTTTTTTCCTCCAAATAAAAAAAGAA 2385129 33 100.0 35 ................................. TTCCTCCAGCGGAAGAATCGACTCGCCGCTGGACC 2385197 33 100.0 33 ................................. AGGAGGAACCCATGAGCACTCAAGCGGTCTGAG 2385263 33 100.0 35 ................................. AAAAAGCAGTCACCAAATGGGGCGACGCCAGCAAA 2385331 33 100.0 34 ................................. TTCAGCCGGTCGGCCTGCGGACGCCGGACGTCGA 2385398 33 100.0 34 ................................. ACGGCTGCGTCGCTGAGCGAAGCCATCACAAAAC 2385465 33 100.0 34 ................................. TTCAAAGCCGTGCTGTACAAGGACGGTAAGGCAT 2385532 33 100.0 35 ................................. ATAAAAGAATTATCCAAAAATGATGGGTATGATAT 2385600 33 100.0 35 ................................. GGCATGCGTTTGCGTCGGACTTATATGACGCAGGC 2385668 33 100.0 34 ................................. TTTTTCCATCCGCTCCGTGAGCTTTTGCGCAACT 2385735 33 100.0 34 ................................. CTGATCCAGAAGGGTATCCAGCCGGATGGTGTTT 2385802 33 100.0 36 ................................. CGCAGCAGCCTGTCAATCCTTACGGCGGCATGGGCA 2385871 33 100.0 37 ................................. TTCTGGATATAGCCCAGAATAGACGGACCGACGTAAA 2385941 33 100.0 35 ................................. GGTCTGCGTGACGGTGAAATCTTCCGAATCTGACT 2386009 33 100.0 34 ................................. TTCACAGCTCATTTCCAATACCTCGTTTCTAAAA 2386076 33 100.0 35 ................................. ATTCTGGTCATTTCCAAACGAATGCAACTTATCAA 2386144 33 100.0 33 ................................. GCTCGTGTTGGCCTGCTTGTCCAGATCCATGAC 2386210 33 100.0 34 ................................. ATCTCGCGCGTCCTCCTTAGTAAGCCCCAAATTC 2386277 33 100.0 34 ................................. ATTTTGGTCGTCGAAGCGGAGACAAAGGCCCTCG 2386344 33 100.0 35 ................................. TCCAAGTGGTGAATGGTGCAACAAGGATTTTTGGC 2386412 33 100.0 35 ................................. AGTTTTGCGTTATGCTATCCCACCGCCGTGTGCGA 2386480 33 100.0 34 ................................. ATTGTGTCTATATATTACCATACATACGCATGGT 2386547 33 100.0 36 ................................. TTCAGTGCCGCCGGGGAGAGCTTGGTATAGTCCGCG 2386616 33 100.0 34 ................................. ATTTGTGCGCATCGGCTGCTGTAACCGCTGGTAC 2386683 33 100.0 36 ................................. AACTTCAATTTCGCCGGGGTGCGGCCCAATCCCGCC 2386752 33 100.0 38 ................................. TTGTTCACAGACTTGTCGAGGGATGCCAGCGACTGCTG 2386823 33 100.0 34 ................................. ACCCAGTGGACCGCCCTCTGGTACGTTGGCGGCA 2386890 33 100.0 34 ................................. ACCTCGGACAGGTCAGCAGACCAGCGAACGTCCC 2386957 33 100.0 33 ................................. TTCCAATCTCCACACAAGACGGCATAGACATGA 2387023 33 100.0 34 ................................. TCTTCCACATGTGCAGGCAGTACGGATGGGTGTT 2387090 33 100.0 35 ................................. GCTTAATGGCTTTTGGGAAAGACAGTTCCAGAAAG 2387158 33 100.0 34 ................................. TCTTGCCCGGCGGCGGTTTTGAGCGCTAGGGCCT 2387225 33 100.0 35 ................................. TCACTTCAGAGGTCTGGCCTTCCTCATCGGTCACG 2387293 33 100.0 35 ................................. AGCTATGAGGTGGACACCAAGACCGGCCCGCTGAC 2387361 33 100.0 33 ................................. CCGTTCATCCAGACAACCGTGTTGGTTTCCTCC 2387427 33 100.0 35 ................................. CTCTGTGGTGCTGTCGATGTCGACGATGCACTCGC 2387495 33 100.0 34 ................................. GCCTCGTTGACCATGGCTTGCAGCATATTGCGCC 2387562 33 100.0 35 ................................. TTGCAAGTCGGTAGGCCATCGTCGAAAATTGCCCC 2387630 33 100.0 34 ................................. CTATGTGAAGAAAACCAACCCGCGCACTGACCTT 2387697 33 93.9 34 .....T..............T............ GTCGTCGCCTCCATTCGCAGCAAAACCAGAACCG 2387764 33 100.0 36 ................................. CACACTGGCCGTGGTGCCTACGACAATGCCGTGGCA 2387833 33 97.0 35 ............A.................... ACGGACATCGACTGGCTGGGCGTTGGTAAGAACGT 2387901 33 97.0 0 ..................A.............. | ========== ====== ====== ====== ================================= ====================================== ================== 57 33 99.7 35 GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Left flank : CCATTCTTCTGGAAGTGAGGTTCGTCTATGCTGGTCCTGATCACCTACGATGTCAACACTGAGACCGCTGCTGGGCGCAAACGCCTGCGCAAAGTGGCCAAAAAGTGCGTGGACCACGGGCAGCGGGTGCAGAATTCTGTCTTCGAGTGCCTGCTGGACGCCGCACAGTTTGCTGTTCTGAAGTCCGAGCTTGCCGCTCTCATCGACCCCGATCTGGACAGTCTGCGGTTTTATCAACTGGGCAACAACTATAAGACCAAGGTCGAGCACATCGGAGTTCATCCCCTGTTTGAATCCGGAGACGTGCTGATCTTCTAGCCCTCTCCCTCGGTGCGAATGGAAAGTGCTCACCCTTTTTCCGTCTCCTTCGCACCATGTTTTCAAGGCATTCTGTGCAGATCGCGGCTCTTTTTTCGGATGTTTTTGGAAAAGCTCTTCCAAATCTGTGCAGATCGTTTTATAATGAAACAAAAGCGGAGATGTTTTTCTCCGTTTTTGCT # Right flank : TGTGTCGGTGGTCTACCTGTCCGATGATCACCTGCGGTCGCCCTCCTCGCGGACGGCGGAAGATGCCGCCCGCCGGGGTGAGCACATTGGCCATCTCATTTTCCTGCACGACAGTGGACAGATACCCGCTGTGGCAGTGATAACGCAGCAGGCCGACCCGGCCGAGCTATGCTGCAAAGTGCATCTTTTAAGATGACAATTTCCTTGTCATCTCGCTTCGCTCGAATCTTATAGCTAAAGCATTTTCTACTCCACCAGCGGAGCTGTTGGTTGTCGCCCGCTCAAGCTACTCAAAACAAAAGCAAAAGGCGGCATGACCCGTTGTATGGGCCACGCCGCCTTTTGCTTCAGGGCTCGTTTGCCTGCAGCACACAGGCACAATACCCCGGTTCGGGCTGATAGCAGTGGATGGTCAGGTATTTGTCCACCTCCGGGCTGTAATCGTGGAGGGTATGCTTCGTACCGTTCAGCGCCACATCTGCATAGGACACCAGCCACTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCTCGCGGAGGGCGTGGATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-8.60,-8.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2696488-2696092 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065377.1 Faecalibacterium prausnitzii strain Fp77 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2696487 29 100.0 32 ............................. GTCGAGGGGCCAGACCTGGGCGCGGAGATTGA 2696426 29 96.6 32 ..............T.............. CACTTCTGGTGGCAGGGCAAGCTGTACAGCCG 2696365 29 96.6 32 ............................T CATCACGCACATACTTCAGTTCGGAAGTGTCC 2696304 29 100.0 32 ............................. CAGTTCGTGAACTTCTGGCCGGAGCAGTCGTA 2696243 29 100.0 33 ............................. AAGTACAACAACGGCAAGCTGCGCTGGCTCATG 2696181 29 96.6 32 .........................C... AACAACGCCGCAGACAACAGCGTGAGCAACGG 2696120 29 75.9 0 T....................C.T.CGAA | ========== ====== ====== ====== ============================= ================================= ================== 7 29 95.1 32 CTTTTCCCCGCATACGCGGGGGTGATCCC # Left flank : TGGAGCCGGGCAGTTGCTGGCAGTTCCGGCTGACTGCAAACCCCACCAAAAGCTGCAAAGACACCAAAAACCCCGCAGCGCGGGGAACTGTGGCCGCACATTGCACGACACAGTACCAGAAGCAGTGGCTGTTGGAGCGCGCTGCAAAGCACGGCTTTGCTCTGCGGGACGAGGGATTTACCGTGACCAGGGTGCAGTGGCAGCACTTTGCCAAGCACGGCACCCGGCCGGTGACCCTGCTGGCAGTGACCTATGAGGGCATTTTACAGGTGACCGATGCGGAACAGTTCCGGGCACTGCTGTGTCAGGGCATGGGGCGCGGCAAGGCCTATGGCCTTGGGCTGATGACCATTATGCGCGGAGGAAACTGAGATGGACGAGATGCCGGGCATGATTCGGCCGGGCCTACAGGCGCTGCCACAGGTGAAAGACCGGATGACGTTTCTGTATCTGGAACACTGCACCCTTGGCCGACAGGACGGCGCGATCACCGTTACAGA # Right flank : AAAACAGCCACAGGCTAAACTAAAAATGAAATGATGTTTCTGGAAAGGAGAACTCTGTAATTTTGGCACTTGCTCAGGCTGCTATTAAAAACCCAAGAGCATAAGGACTTTATGACGAATTATCGTTAAAAATCAAGCAAACAAATAAGGCTCACCGCCAATTTTAGCGGTTGGCCTTATTTGTTTGCTCATGTATGAGGTGAATTGCGTTTAACACGGGGGCGCTTCCCAGAAGCATCACAGATACACCTCCACAGTCAGGTCGGTCCACGCTGCACGGCGGAACTGGTGGGGCATCTTGTTGGCTTCCCGGTAACGCTTGGCGGTTTCAAAGTCGATGGTGAAGGTGAGGATGGGCTTTTCCGATACAGCCATCAGATCGGTGCGCTCCTCTTTGGACTTCTTGCAGCCGGTGTTCAGCTTCCAGCGGTAGGAGTAATCGGCAATAGGGGTGACGACTTCAACGAACTGCTCAATCAATTCGGGCGCAAGACAGGCAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCATACGCGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //