Array 1 56676-57719 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJCHB010000010.1 Intestinimonas butyriciproducens strain SL.3.04 OLCNBLDF_10, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	=================================	====================================	==================
     56676	    33	 100.0	    34	.................................	TTCAGGTAAACCGCAAACTTATCAAACAGAAATG  	
     56743	    33	 100.0	    35	.................................	TTTGGCCGAATGCTTTGTAACCATTGGGGATAACC 	
     56811	    33	 100.0	    35	.................................	TATGAACGCCCCCTTACCCCGAAAGAAGCCCAATT 	
     56879	    33	 100.0	    34	.................................	TGATTGGATAGATCACATGGTTGAGAACTACGCC  	
     56946	    33	 100.0	    35	.................................	AGATGTTGGAGGGGTGAGCCGATGGCCGGTGAAAA 	
     57014	    33	 100.0	    35	.................................	AAAGGCCGTTACCGGGTGTGTAAGGGAAGCCGTGC 	
     57082	    33	 100.0	    35	.................................	AGCTACAGGAGCCACAGGGCATTAAATAGCAGGGA 	
     57150	    33	 100.0	    36	.................................	AATTCAAGGCGACCGGAATAGCGCTTGCTATCCTCG	
     57219	    33	 100.0	    33	.................................	AGATCAGGCAGGTCGAAGCGCGTCAACTCCCGG   	
     57285	    33	 100.0	    34	.................................	CGCGATGTCCTCGACGGTATCGCCCATGTCAAGC  	
     57352	    33	 100.0	    34	.................................	TATTCGCGGGAAATGGCCGGAACTGGCGCTGCTG  	
     57419	    33	 100.0	    33	.................................	GCGCTCTCCGTCATCCCAGCAAAGATCGTCCAA   	
     57485	    33	 100.0	    33	.................................	ATCGTAAATATGATCTTCTCCGTCTGTGTCGAT   	
     57551	    33	 100.0	    34	.................................	ATAAAAACACCTCAAATACAGACAGAGGGGCCCC  	
     57618	    33	 100.0	    36	.................................	TCCGCGTCCTCCTCGTCGATCACGGTCACGTAGCCC	
     57687	    33	  81.8	     0	........................A..CTCC.C	|                                   	
==========	======	======	======	=================================	====================================	==================
        16	    33	  98.9	    34	GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT	                                    	       

# Left flank :   ACTTGGACGCTTACCCACCTTTTTTGTGGAAGTGATAGTATGCTGGTTTTAATCACCTATGATGTGAACACCGAGGACGCCGCTGGCCGCAAACGTCTGCGGCAAATCGCGAAGCAGTGCGTCAACTACGGACAGCGGGTGCAGAACTCTGTCTTTGAATGTCTGCTGGATGCGGCCCAGTGCCGCATGTTACAGGCAAAGCTGTGTAAGATCATGGACCCGGAAAAGGACAGTCTTCGTTTTTATTACTTGGGAAACCGCTATGAAAACAAGATCGAGCATTTTGGAGTAAAGGCATCCTACAACCCAGAAGATGTATTGATGCTTTAGGTGCGAAACGTAAGCGCGCAGAAAATCGCCGAGGTCTCGCACCAGATTTTGCAGTATTATCTGTAAGGAGGCAACCTTATTTTTCAAAATCGGATAAGAGTTAGAAGAGGATATTTGTAAGAATTGTCTATTTTTCACGAGAACAGATTGAATTTTTAGCTGTTTTTGCT
# Right flank :  CTTTATACGGTCGCTCACATATGGATAAGACCGCTAAAAAATCCAATGAATCTTTCGTAACAGCATCCTATCCTACTTCTAACAAATTTCTAACAGAACGATAAAAAATGAATATCCAACAGGCCCAATGGTTTCTGAGATTTTATTCCGCATGAAACCCGGAACTCCTTGTGCCACAGCGGTTTTATGGGGTATTACCAGAGACAGCCAAACACCCGTAGGAACATACCATGCCCCCTTCGAGTTCTGCTGTCTCCACCAGAAAAATCCCCGGAGCCGCAAGGCTTTGGGGATTTTTCGTTTTTGGTTAATTTTTAAATGTGACATTTCTTTGTATCAAATGTGTTTCTTTTATGAATTTTAGCACTCCTATATTGACAGTGCTAAAACAGAGGACTATAGTAGAGCCGTACCAAGGGAAGGGGACCAGAAAAGGTCTTCTCTGCAGGGCAAAAAGGTAAGACAACGAATGGAGGAATGACTTATGTTGCCCAGCATTT

# Questionable array : NO	 Score: 9.21
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCCCCCCACACGGGGGGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [6,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCCCTCCACACGGAGGGCGTGGATAGAAAT with 91% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-10.50,-9.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-6] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [10.42,0   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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