Array 1 72965-74050 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACTTU010000004.1 Francisella hispaniensis strain F1109 hispaniensis_5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     72965	    35	  88.9	    28	...A.T..T.-.........................	AAATATTATGATTATATTGAAGGTAAAA   	TTGGC [72978]
     73033	    36	 100.0	    30	....................................	CGAATATCGCCAAACCGTGCTAATAGTTTA 	
     73099	    36	 100.0	    31	....................................	ATATTTTTTCCATTCGTTTCAATTTGGTCTA	
     73166	    36	 100.0	    30	....................................	TAGCATTGAACAAACTTTGCAAGAATACAA 	
     73232	    36	 100.0	    28	....................................	TAAAAATCATCTCTAACGCTGTTCTGAA   	
     73296	    36	 100.0	    30	....................................	CGAATATCGCCAAACCGTGCTAATAGTTTA 	
     73362	    36	 100.0	    31	....................................	ATATTTTTTCCATTCGTTTCAATTTGGTCTA	
     73429	    36	 100.0	    30	....................................	TAGCATTGAACAAACTTTGCAAGAATACAA 	
     73495	    36	 100.0	    28	....................................	TAAAAATCATCTCTAACGCTGTTCTGAA   	
     73559	    36	 100.0	    27	....................................	TCTAAGCAAGGAATAAATACAATACAA    	
     73622	    36	 100.0	    29	....................................	TGGCTATCGTTAGGTATTACAAAGCCATT  	
     73687	    36	 100.0	    30	....................................	CATTATATAATGGTTATTACGTCAACGACT 	
     73753	    36	 100.0	    29	....................................	TATCTTTATTCTTAGATCTAAGATATAAG  	
     73818	    36	 100.0	    30	....................................	ATAAGAGTTGGAAAAAGAATAACAGTTGGT 	
     73884	    36	 100.0	    30	....................................	TATATATTGCAATAGCGCCAGAATTTGCAA 	
     73950	    36	 100.0	    29	....................................	TATCTTTATTCTTAGATCTAAGATATAAG  	
     74015	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        17	    36	  99.3	    29	ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC	                               	       

# Left flank :   TAATATCTATTAGCTTAACCTTCTCTTTTTTTTGTAAATCAAGAAATTGTTTTACTGATATTTTTTCTACTTTATTCATCTTAGTCTCCTTATTTTAACTTTATCTAATTTAGATTTTACTAATATAAACTTTAAATTTTTTAGTTTTTATCACCACAATATATGCTGTACAAAGCCTCTAATATTTTTGTTACCGAAGGATCGTTGATACTGTAATATACATTTTGCGCCTCTTTCCTACATTTGACCAGACCATTATTTCTCAATACTGATAAGTGCTGAGAAAATGCCGATTGGCTCAAACTAGAGTACTCTGCTAACTCTCCTACCGTCATTTCTCGTCTAAGTAGCAAACATAATATCAATAGTCTTGACTCATGAGATATTGCTTTTAATAATGAAGAAGCTTTACTAGCATTATCTTTCATCTGCATTAAATCCATTTTCATAAGCCTGTAAATCCTCAAGTAATGTTTATATTAGCAAATTCTAATTTAGAA
# Right flank :  CCCGTTTTTGCCTAAATGAGCAAAAAAAGACCTAAAATCTATCATCTTTTTAGCATTTTTGTATATAACAACAGTCATATTTTTAAATATCTCTAAGAACTTAATGGTTATTTTAACATAAAGACTAAGGTTTGCAATTTTTAGTCTATAAACACAACCTCTTGTTCTCTATGAATGGCATAACCATATTTTATCACATCCTTGTCTGGAGCGTTAAAAATTAAAACACTATCAGCATTTGTAAATAATGGCACATAGTTGTTTTCTATTTCAGCTAAAATCAAGTCTAACATTCTCTTACTATATTTGAGCTCAAATACAGAATACTGCAAACGTACACCATACCCTTCCAAAAATTTGGCAAATTTCGCTCTAACTTTATTATTACTAAAATCATAACTGACTATTAACATACACCCTCCTAGTTTCATAACAAAATATCGGATACTCTGCAATTTCTTTATCTCGCATAAAGGCACGATAAAACTCTCTTACATACT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCTACAACAGTAGAAATTATTTAAAGTTCTTAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [80.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.27,0   Confidence: MEDIUM] 

# Array family : NA
//