Array 1 180874-179013 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUIJ01000004.1 Klebsiella pneumoniae strain CVUAS 11714 NODE_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 180873 29 100.0 32 ............................. CAGCTGGCCGTTTTGATATGGACGACGCGCAA 180812 29 100.0 32 ............................. CAGAAATTTACCGTTGCGCCGGCGGTTCAGCA 180751 29 100.0 32 ............................. CGCAGCTGGATTCCGAGCGCGTGGTGTTCGGC 180690 29 100.0 33 ............................. AGGTATCAGCAGAAATGCTGACCCGGATCCTGC 180628 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 180567 29 100.0 32 ............................. CTAAACCCTTTCCCCTGGACGGAGGCGCTCAC 180506 29 100.0 32 ............................. ATTAACGTTTTAATCCCGATATAGTCACTGGA 180445 29 100.0 32 ............................. TGACAACCAGATCCGAAAATCCTGGAGCCGTG 180384 29 100.0 32 ............................. CCATTTCCCCGAGTCAAAATCAGTAAAAAAAT 180323 29 100.0 32 ............................. GCGCGCGCCTCTTCGAGTTGTCGTATCAGCGA 180262 29 100.0 32 ............................. GGGACAAAAAATATCGGCGCCAACGCGGCACG 180201 29 100.0 32 ............................. CACTGATCGCGGCGTATAGCGATACGGGCCCG 180140 29 100.0 32 ............................. GCTATTGACGGGCTGAAAGAGGTGCAGGAGGC 180079 29 100.0 32 ............................. CATTTCAGGCGGCAGGGCGCGCACAACTTGCC 180018 29 100.0 32 ............................. CATACAGTATTATCATAGCGAATTCCCATTGG 179957 29 100.0 32 ............................. CCACCGAACTGGCCGTGCACATTCACCTCAAA 179896 29 100.0 32 ............................. AGTGCTACACCGATACTGGCCCATCATTCCAG 179835 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 179774 29 96.6 33 ............................T GGCGGCGCGACAAAAATTATACCCAGCAACGAA 179712 29 96.6 32 ............................A GTCGATCCCCACGGTTGAGAAATTATTGACCC 179651 29 100.0 32 ............................. CGGAGGGTTGCCAACCGATGATTTCAGCAAGG 179590 29 96.6 32 ............................C CCTGAATCCGTCAACGTTTGGAGTCTTGAGTT 179529 29 100.0 32 ............................. AAATAATCGTGCTGCTCTGACGTACCGGGCAC 179468 29 100.0 32 ............................. CGCTTCAGGGAGAAGAAACTTCCTTCGGCGCC 179407 29 100.0 32 ............................. ATAAGGCCTGGCTTTAACTCAACGGAGCACGG 179346 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 179285 29 96.6 32 ..........A.................. ACGGTAATTATTTATGCCCTGGATAATATTGG 179224 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 179163 29 93.1 32 A..................T......... TGCGTCACGACGCCGGCGACAGTGACATCGTC 179102 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 179041 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 31 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGACACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCAGGAAAGTTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //