Array 1 1072199-1072752 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 1072199 35 100.0 40 ................................... TTAATTGTGGTGAACAAGCATGGGAGCTGAGGGTGAAAAG 1072274 35 100.0 38 ................................... TTTGTCGTTCCGTTCCAGTAAAATGAGTCAAATCCAAC 1072347 35 100.0 40 ................................... TTTCGATCTGTGTCTGCAACTCATCAAACAGCTTTTGCTC 1072422 35 100.0 40 ................................... ATCTGGGCAACGAACCGTTGAAGATTTACGTTCAACTCCT 1072497 35 100.0 40 ................................... ATTTGCCGACAAAAAAGCGAAAGGGAAGCTGACGTTGGAA 1072572 35 100.0 38 ................................... ATCTCGTCATCCACCGCACCGAAAAGACGACATATCAA 1072645 35 100.0 38 ................................... ATGTTATCTACGCCGTGCTCTTTGAGTATTTCCACGAA 1072718 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ======================================== ================== 8 35 100.0 39 GTTGCACTCATAACCCCGATGAAAAGGGGACTGAA # Left flank : ACAATCAAATAATTGGGCTGGGCGTAACGCCCGGCTTTTTTGTGGCCCTCAGCGCGGAGAACTTTCTTTCAATGATGTTGTTGTCGTTTACCATAATGATCAGTTGCATCATGTTATTCTTAGAAATTTTTTAAAATAGCTTCTAATAGAGACAAATATTTGGTAAAATTGGCAATGGAACAGGTTTATTACCCCCGGGTTGGTTTAGCACCTGTAGACCGTTTTTATACCTAACAGCAGTTAGGTTTCATTATCTGCAAAACGTTTTTCGAAAAAGGAGCCCTGGGAGGAATTATCTGCCATCTTTCAGGTCAAGAGTTGTCATGATAGTTCATGAAAACATAGTAGCTGCAAGAGAAAGAGATTTCCGGAACTTTCGAATGAGAAGATTATTTCTGTGCAGAATTATGTGCTTCGAAATTTTTGCCTCGGAAAGCATTATAGCTTTCCGCGGAAACCGTTGTGCGGTAAGACTTGGAACCATCCAGTCCGATGCGGGT # Right flank : AAGATAATTGACCATGATGAACCGATTAAAAAAACTCGATGAAAAGGGAAATGGAGACTTTAGAAATATATCCCGGCAAAGTATTTTGCCGGGATTTTTTTGTGCGCCCGGCATGGGCGTTAACTTGGTGGTGAAAGTCCACTGCAGGCGAGGCAGCACGAGTCTGCTAGCCGAAGGCAAGGGTGTCCATCGCGAGGTGGGATCTGAAGGAAGCCGGAGGCAAAGCCACGGCCTGATGAACAAGAACCCCATAAGAGGCTAAGTCGCTCGGATGAGCTGGCGAAACACAGCGAAATCCCAGGCTGCCAAGGGGCGGCGGAGTATATGGGGCAGGCGCGGGGCGAAGGTTAACGTTCTTACCCGGGGAGGCCTGCCGGGGAAGCCAGGGAGAGCTGGTAACCCGTGTCGAAAGGCACGGCTGAGCCGGCAGGAGTCAGCAGAAGGCATAGTACCCTAGGTGTCATGGACTCTGGGGGGAAGGCCTGAACATCAAGTCAGAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTCATAACCCCGATGAAAAGGGGACTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 1923412-1915104 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1923411 37 100.0 36 ..................................... TTTCATCAAAGCCCCAATATACCAAGGGATATAGGT 1923338 37 100.0 37 ..................................... TGTTGTATCACGGGCAGCTATGCGCCAATAATAACTC 1923264 37 100.0 38 ..................................... TCATCGCTGAAGCCCGCACTGGCTGGCCTGCTGCACTC 1923189 37 100.0 36 ..................................... AACAATTCACCCCTTCTTAATCCCGTCCGTACTGCT 1923116 37 100.0 38 ..................................... TAATGTAAAGTATGTGCAATTCAAAATATCAACGGGCT 1923041 37 100.0 36 ..................................... GTGGAAGTCGGATGATATGGTTCGACAAACAAAATC 1922968 37 100.0 38 ..................................... TCCCGGACGGCTATTGTGTTTTCTTTTACTCTTCAGGG 1922893 37 100.0 37 ..................................... CAATCCGGCAGTAGCGGCGCCATAGAATTCCGATCTG 1922819 37 100.0 38 ..................................... TCTTCAAAGTACACTTTGAATGCTTCGTGCCCACACCC 1922744 37 100.0 38 ..................................... GCTCTGGGAGCGAGGCGAGGACTTTGAGATGGTATTCT 1922669 37 100.0 36 ..................................... AGGGCATGGAGAGCCAATTTGATCGCTTACGCCAGG 1922596 37 100.0 36 ..................................... CAACCTGATTAAAGGACAACGCCAGCTCGTTGAGCT 1922523 37 100.0 36 ..................................... CTCCTCTCAAACGGCTCCCGATATCATATTACCACG 1922450 37 100.0 38 ..................................... TTTGCAATTCAAACCTTGCATTGGACAAATTCAAAGCA 1922375 37 100.0 35 ..................................... TACCTGCTCGGCGGTCAGCCCGGTTTCTCTTAGTT 1922303 37 100.0 37 ..................................... TCTGTACCAGGAAGGTGCCAGTTATCCCCCGGTCGGG 1922229 37 100.0 35 ..................................... TTAATTAACCGTAACGGTCATATAAAGTTTTTCCA 1922157 37 100.0 36 ..................................... AACGGCCAGGAAAGACGAATCAGGGGTTTTTCAATT 1922084 37 100.0 36 ..................................... TACCGACTACAAACTGGCCTGTAAATATGTTTATGA 1922011 37 100.0 39 ..................................... AGTTCGATATATAAGTTTGCCAGTTCAGCGGCCGCCGGC 1921935 37 100.0 39 ..................................... TTCGCTGGTCTGCTAGCTTGAACAAACTATCTCTTTCTG 1921859 37 100.0 37 ..................................... GGCTTTCACCGTCAAAGAAATGAAATTTGATATAAAT 1921785 37 100.0 38 ..................................... GCATCGGCCTTGGCCATAGCCCAGGCAATTTGCATTAT 1921710 37 100.0 38 ..................................... TCATATTCGCGTATCTCGATACAAACCCTATTAGCAAC 1921635 37 100.0 37 ..................................... TCAGTAAAACACAGTCGGATATATCCGCATATCAGAA 1921561 37 100.0 37 ..................................... GGTCGTTTTCTCCCTTCCTGGAGAAGAAGACTACATC 1921487 37 100.0 36 ..................................... TGAGTCAAAGTGATTTTCAGCGTCAACTTCATTTCA 1921414 37 100.0 36 ..................................... GTGGCGTTGATACCCAGGACGACAGGCTTGAATTTG 1921341 37 100.0 37 ..................................... TCCTTAACCCTGCAGTGCGGCGGTCACATAATTGGCG 1921267 37 100.0 38 ..................................... GTCTCAGATTACGAGCCTCCATTATTTGCTTTAATCTT 1921192 37 100.0 36 ..................................... GAAGTCTGAAAAATTCGCTCTCGTTGCAGACATTAA 1921119 37 100.0 36 ..................................... TCCACTATTGCGATTAAAGGCACCGCGCTTCCTTTT 1921046 37 100.0 37 ..................................... TTTTGACGCTATGACCCTCACCCTCAATTTCAGGACC 1920972 37 100.0 37 ..................................... ATCAAGTTATTTGCTGTAATTCTAAAAAACCTGAGGA 1920898 37 100.0 37 ..................................... TGCAACCCAGCCAACGTGAGATTTATAAGCCAAATAC 1920824 37 100.0 37 ..................................... ATCTTAATTGAAATAGGGTCTTTCAGCGTTCTTCCGC 1920750 37 100.0 35 ..................................... GGTCAGGTCGGCGCCGGCGGCATCCACCCGGAGGT 1920678 37 100.0 39 ..................................... CAGGGTAATTGGGATGCCCAAGCGTGGAAGGGTCACAGT 1920602 37 100.0 35 ..................................... CTATCTGAACGAGCTGGACCAGTACGCCAAGCACG 1920530 37 100.0 36 ..................................... ATCTCCAACAGCATAAAAGTTTTCCCTCGTTTCTCT 1920457 37 100.0 38 ..................................... TCCTGTTATAGGTTGAGCGGAGCGGGGAACTTTGCTCC 1920382 37 100.0 35 ..................................... TGGTATAGCGTGGATAGCATGACCTGGGTGAAGGA 1920310 37 100.0 39 ..................................... TACATGAAGTCATATTTCTCCTCCTCCCAGCCCTTTTTA 1920234 37 100.0 39 ..................................... CATACAGCTTCTCAAGCTCTGAGCCTTGCGCTTCCGCTA 1920158 37 100.0 37 ..................................... TGTCAACAGCCGCAAAGCCACTCCCATTGAGTATTTG 1920084 37 100.0 38 ..................................... GGACGCCCTGGCGGCCGCCGCGGCCAAGTTCGGCCGTC 1920009 37 100.0 36 ..................................... ATTCGGCCAATATTCCAGGTATAAGGCAGAATTTTG 1919936 37 100.0 36 ..................................... CTTACCCAAGTATTTCCCGGAGGAATGGGAGTTCCG 1919863 37 100.0 37 ..................................... CCTTTCACGGCGCAATCTCCTTGACTGAACTTACTCC 1919789 37 100.0 36 ..................................... GTATAATCACACGAATAATTTTGTTACAAAGGGTAT 1919716 37 100.0 35 ..................................... TGAAGGGTGGATATCAGATTAACGGTACCACCTAT 1919644 37 100.0 38 ..................................... CGATTTCTTCAATTTGGTTTTCGATGGATTCTTTCATA 1919569 37 100.0 35 ..................................... TTTCCTCAGCTGTTAGTCCACGTACCCGAAATGAA 1919497 37 100.0 38 ..................................... GTGTCTATGGACCCACCGCTGCAACGTGAATATGTCGC 1919422 37 100.0 37 ..................................... GGGCTCCCCGTTCAAAATGACAGTCCGAATCTGGCTA 1919348 37 100.0 35 ..................................... GTATAAGGCCTGGGCAAAGCAGGGGTACTTGAAAG 1919276 37 100.0 36 ..................................... TCCTTCTGGAGTCGACCGGACGAACTGAGCTTCAAA 1919203 37 100.0 35 ..................................... TCGGCGTCCTGGGTGGTTGTCAGCTGCTGGATTGT 1919131 37 100.0 38 ..................................... ACGATAAACTGCTGCCACGGCTCAAGCTGAAAAACGCA 1919056 37 100.0 35 ..................................... GACGAAGTTCGGCGCCCACTTGTCCGCCTCGCGGC 1918984 37 100.0 38 ..................................... CGATTTCGAGGCTGTCTCTCACGTAGTCGGACCATCTG 1918909 37 100.0 37 ..................................... TTTACAAAGTGGAAGGATGGGATGCTGATTACGAAGG 1918835 37 100.0 37 ..................................... ATAAAGTTGCACCCTGTGGCGTGCCTTTGGCACCGGC 1918761 37 100.0 38 ..................................... GGCGTGGGAAACGTGCTTGTCGAACCCCTGTGGCAGGG 1918686 37 100.0 37 ..................................... TGTAACAAAGATAAAACAGACTGATGATGAACGTACA 1918612 37 100.0 37 ..................................... CTTTATTCTGCTCTTGTGATGGCAGACCCCTTAAGGA 1918538 37 100.0 38 ..................................... CTGGAATAAAAACATATATACTATCACCCACCCTTGCG 1918463 37 100.0 36 ..................................... TTTGACGTAGGCCGAGAAATTCGGCCTTTTATTAGC 1918390 37 100.0 37 ..................................... TTCCATATTCCAAAGCTCGTGGACTTCTCGCTCCAAA 1918316 37 100.0 36 ..................................... TGAATCGGATAGTTCACAATCTCGTTCTTTCTCATT 1918243 37 100.0 36 ..................................... TTCATCCAATTCGTTCGCCTAGGGCAGGGTGTTCGG 1918170 37 100.0 35 ..................................... ACTCTTCATACAGAAGATACACGCTCATCCGGTAC 1918098 37 100.0 39 ..................................... GCAGAAAGATGACTTTGATGGAGTATTAGCCTTGTGTAA 1918022 37 100.0 37 ..................................... AATTAACTAAACTTCTTCAAGGACAGCAAAGAATGTA 1917948 37 100.0 36 ..................................... CGCTTGGGTGGAGTGCACCGTCCCCCAGCTATAGGT 1917875 37 100.0 37 ..................................... TAAGTTCGACAACCTTACAAAGTTCCATACCGCCATT 1917801 37 100.0 36 ..................................... GTTCCTGCGCCGACAGGACTCACTGCGGACGTTTCT 1917728 37 100.0 36 ..................................... GGCCGGGCTGGAAGAAGCCCAGGCTGCCGTGAATGT 1917655 37 100.0 35 ..................................... GGCCACGTCTTTCGTGGTTGCCGATGCGTCGAAGT 1917583 37 100.0 36 ..................................... GATTTACCTGCTCCGGGAAGGCGAGATGTTCCCGCT 1917510 37 100.0 37 ..................................... GACCCCTGCTGACATTGGGGCGGTGGCGGCCAGCGAT 1917436 37 100.0 37 ..................................... TGCTTTGGTCAAGGAATATTGGGAGCGTCCTACTCTC 1917362 37 100.0 37 ..................................... GAATACTCATAGGAGCAAGCATTTTCTTCCAGGTTTC 1917288 37 100.0 38 ..................................... GCAAGTGCCGCTGGTTGCCAACGATCCTTGCCCATATC 1917213 37 100.0 35 ..................................... CTATTTTGCCATCATCGTCAACATCAAGACATATA 1917141 37 100.0 40 ..................................... AGTTTAGCTCTGCACATCAGATACCTCACGGACCGGCGGT 1917064 37 100.0 36 ..................................... TTCCATTACGATAGCCACGGACTCCAGGACGAAATA 1916991 37 100.0 39 ..................................... GAACACCTAACCGCTTCATTACCCGCTGGAGTTTCCGTT 1916915 37 100.0 38 ..................................... AAAAAAACCTTCTCGACATACCCGACGATTTCGACACC 1916840 37 100.0 36 ..................................... TACCACCAGGCCCCCGCCCCTGCGGGGGTTTGCATT 1916767 37 100.0 38 ..................................... GCAAAAAAGTCTCGACATAAACAATGAAAGGCGCGTCA 1916692 37 100.0 39 ..................................... CATTTTGGTTAGCCTCCTTTTTAACTATCAGTTATTTCG 1916616 37 100.0 38 ..................................... TTAGTTAAAGTTAGTGTCAACATAATGGCTCCACCAGA 1916541 37 100.0 38 ..................................... TCTCACAATCAACCCCGCTTCTTCCGGTATTTCATCTT 1916466 37 100.0 37 ..................................... TTGTGCGTCCAGAAACCTTCCCATTGTCCGACCTTCA 1916392 37 100.0 36 ..................................... ACCGTGCCGGTCAGTGTCCACAGCAAACTAATTACC 1916319 37 100.0 36 ..................................... GGTCGTAGAACATACTTACCAGCAAGCTGTCATGCG 1916246 37 100.0 36 ..................................... TAAATCCTGATATCTTACCCCATGTCGTTTCAAGCC 1916173 37 100.0 35 ..................................... CACTGCCGCCAACGACATCCAGTACGTTGACATCG 1916101 37 100.0 37 ..................................... CACCATAATCCCACCGCATTTGCACATCGCTTCCGCC 1916027 37 100.0 37 ..................................... CCGGCTGAGGATTAATGTATATTTGGACTCTTATGTG 1915953 37 100.0 34 ..................................... CGGGAACTGATTACCGCACACTGACGGGTTCAGG 1915882 37 100.0 40 ..................................... AGGAAACCACGCTGGTCTGGATAGCCGGGTCAGAAATGCC 1915805 37 100.0 37 ..................................... GCACCTGTCGCTTGTCGGCCCGCATGGTATCCAAAAA 1915731 37 100.0 39 ..................................... GCTGCCAGTGCGTTGAGTGCATGGAACGGGACAAGGCAG 1915655 37 100.0 36 ..................................... CCGCTAAGGAGAAAGAAATTAATCCAATAGTAGTAC 1915582 37 100.0 35 ..................................... GAAAATATCTTGTATCTGTTCTGGCGGCTATAAGG 1915510 37 100.0 39 ..................................... GTAAGTGCAAAAAGCGGCTGGCGTTCTCCCTATTATATG 1915434 37 100.0 37 ..................................... AACCAATATGAGTCTTAACCGCTGGCAGGGAATTGGA 1915360 37 100.0 35 ..................................... CTTCACATTCATCCGAAAAAGAATTAGAGGAAGAG 1915288 37 100.0 37 ..................................... CCCACAGTCTCTTCTGCCCCAAAGGGTGCTTATCCAC 1915214 37 100.0 37 ..................................... CCAAATGTGGAGCATGGCTCTTCTATGAATATCTTCG 1915140 37 97.3 0 ....................................T | ========== ====== ====== ====== ===================================== ======================================== ================== 113 37 100.0 37 GTTGCACTAATTACCCCGATGAAAAGGGGACTGAAAG # Left flank : GACGAGAAAGCGCGCTTCGTCACCGAAGAAATTGACCCCGGTCTGGCCGAGGACTGCCCTGCTACCTGTCCCTTTTATCACGTTTGCTGCGCTGAGGATGGTTCCGAATTGTTGACTTCTTCAATTCCGTAGTTTTTCTGGTATGTAACTTTCGGAATTAAGAAGAAAGGTTCCGCTAGAAGAGTACTTGATTAGGGAAATAAGACTTTTACTTTCGGTTGGTTCCTTATGTTCCTAACCGTAGCTCAAATTGGTTATCGCCAATGGTTTTTCGAAAAAGAAGCCTGAGGAGTAAATATCTGACATCGATAAGGGTTCGAGGTTGTTATTAAATGCCCTGAAAATACGAAGTTAGCTGAAAAAAGAAATTTCGAAAATTTCGAAAGAGGAGTAGTTTTTCATGCAAAAATCTTCGCTTCGAATTTTTGCCCTTGAAAAGCGGTTGAACATTCCGCGGAATCCTCTGTACGGTAAGGCTTTGAACCATACAGCCTGATGCG # Right flank : GTAAGGGAAGGAGAGGATGGGCATGACGGTGTTGAGTGAGTTTTTTAGTACTTTGCAGGTGGGCGAGCCGCAGATGTATGAAAATTTAGTCATTTTTCCGTTGCTTGGGATGGAACTACGGGATCCGGGCTACCTCTTACTTGATGAAGCTTTGGTAAAGGGTTTGCTGGAGGTGCGGGAAATAGATGAAAGCGGCAGTGTCAACGAGGTCCTGGTGATCAATAAGGGGGAAACACCCGTCCTCCTAATGGATGGGGAGATACTTTCTGGGGCGAAGCAAAACCGCGTGGTCAACATCAGCATCTTGGTAGCGCCCCGGGTTGAGCTGAAGATACCGGTGAGCTGCGTTGAGCAGGGGCGCTGGCGTTATGTTGCCGACGGTTTTACTGAGAGCAGACGCTTTGCCTATGCTTTTCTGCGTGCAAAGAAGTCGCAACAGGTAGCGGAAAACATCATGTCCTGCGGGGCTTTTATGGCCAATCAGGGGGCCATTTGGGAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACTAATTACCCCGATGAAAAGGGGACTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.50,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 3 2211550-2204611 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2211549 30 100.0 37 .............................. CGATGCCAACGGCGTGGCCGCAAGGTGGGAGGTGCAA 2211482 30 100.0 36 .............................. CATGTCATCTTTCACCACATCCATACCTAGGAGCAT 2211416 30 100.0 36 .............................. AAAACTATCAATCTGCTCCTAACATTTACCTCGCAC 2211350 30 100.0 36 .............................. GAATTTCTGGAACTAGAAGACCACCTTTTTACCTAA 2211284 30 100.0 37 .............................. TTCAACAGTAGGGACTGGATGGTCAAATCCGAAGAGC 2211217 30 100.0 36 .............................. GAGGGTTTGAGGAAGGTTAATGCGATACCTGTAAGG 2211151 30 100.0 37 .............................. AGGAAAAGCAGGCTCCCTATTATTAAAAGGGGTGGGA 2211084 30 100.0 34 .............................. AATATTTCCCGCTCAGCTTTATCTTTGTGGGAAA 2211020 30 100.0 36 .............................. GTGATTTCATCGCAGTAGCCGAGCTATACTGGGAGG 2210954 30 100.0 36 .............................. CCTTCAGATACCTCAACAGCACCAGGTCGCTTTCTA 2210888 30 100.0 36 .............................. AGTCTGTTAGCACCATATTGATGTTTGGATGATTGC 2210822 30 100.0 35 .............................. AGATGCGCCCGTGTAGTATGTCTAGGTATGACTGT 2210757 30 100.0 35 .............................. GCAGCACATCTCAACATTCTTACACGGATAGTGGA 2210692 30 100.0 35 .............................. CCCCCTCGGTCTCGACCAGCCAGGCATCATAACCG 2210627 30 100.0 37 .............................. AAAAATGTAGATATTTTATGTACCTAGGGCGTGTTGC 2210560 30 100.0 36 .............................. TCTTCTTGGCCGCACCGATAATACTACTGACATATA 2210494 30 100.0 38 .............................. CCATTTGGGTCATAAAATCCAACAGTCCACAATCCCGG 2210426 30 100.0 37 .............................. ATATTCATCCAGCGTCATATAATTCAGCCTCCCCTTC 2210359 30 100.0 37 .............................. CGATGTCGGGCTTGACGTTGATCATGTGCCAAGTGCC 2210292 30 100.0 36 .............................. ATAAAATGGAAGAAAAGAAAATAGAGCAGTTTGTTT 2210226 30 100.0 36 .............................. CCAGTGATGAGGTGCCGGTGGTAGAAGGTTTGCAGG 2210160 30 100.0 36 .............................. TAATCCTATAATCTAAACCTATTCTCACATTACACC 2210094 30 100.0 35 .............................. ACTGATTATGATGATGACTATGACTGCACGTACGC 2210029 30 100.0 37 .............................. GTTGTCCTCCTGCAGAACCGGGTTGGCCTTGACCCAC 2209962 30 100.0 37 .............................. AAATCCGTGTAAAACGGCTCAAAATTGGGGCCGTAAC 2209895 30 100.0 37 .............................. TGTCAAGGCGGCGCAAAGCTACGCAAGAATTATAATG 2209828 30 100.0 38 .............................. TCAGCCAATCGAAATTGCAACCAGTCCACTTTCCGCTA 2209760 30 100.0 36 .............................. GTCGCCGAAGTAGAAGGCGTCCAGGAATTTCAACAC 2209694 30 100.0 36 .............................. GCTAGATGATGAGGCACGGCAGATCTGGAAGAAGAC 2209628 30 100.0 36 .............................. CGACAAAAGCTGGCCGTCGGTCACCCTGCGACCTGC 2209562 30 100.0 37 .............................. ATGATAGGGGTAAAATCGAAATTTTGCCGGCCGAGAA 2209495 30 100.0 36 .............................. AACGTATCTGTTTCCGGCGGCGGCCAGGACGTGCTC 2209429 30 100.0 34 .............................. CCGGTGTGCTTGACTTCGGCGATATTCTGATCAA 2209365 30 100.0 39 .............................. ATTTGGAATAAATCTTCTTCGTCAACCTCAAGTGTAATT 2209296 30 100.0 36 .............................. GATCAAGTCCTTGACCAGTTTTTCGTTGCTACGGCC 2209230 30 100.0 35 .............................. GAGAAATTCGCGAGCGTGATGGAAAAGGCCCAGAA 2209165 30 100.0 37 .............................. GAGGCGTACCGGGTAGAGTGGGAGAAGAAGAACGCTG 2209098 30 100.0 37 .............................. AAGCACTGGTTTCCGATGCTACCGGGCAAATTCTCAT 2209031 30 100.0 36 .............................. ATCGCATTCTTCACCGGTACCCCCTCGCCGCCGGTC 2208965 30 100.0 36 .............................. AGAGGCCGGGGCTTTTTGTTTTCGTCTTAATCCAAG 2208899 30 100.0 35 .............................. GTGGTGGTGTGATGCAATTTAAGGACTTGAACAAA 2208834 30 100.0 36 .............................. TGGCCACACGGGACTATGAGCGTGCCCTTAATACGG 2208768 30 100.0 35 .............................. GGAGGACCAGCGATGCGGAAAGTATTCCATTTGGC 2208703 30 100.0 38 .............................. TTGGTACTGGGTCCTCAAACTCAAAAATCAACTTATCG 2208635 30 100.0 37 .............................. TCAGGCCCTCCCAGGGTCCACATCTCACAAAATCCCG 2208568 30 100.0 36 .............................. GGTTAAAACGGTAGCATCATTTGGGTTTGCAAATTA 2208502 30 100.0 36 .............................. AAAGGTAACAAGGCACTCGCTCAAGAGGTTACCGGC 2208436 30 100.0 37 .............................. AGCAGGTACTCCTCCACCTCCGCATAGTCAACGCCTT 2208369 30 100.0 35 .............................. TGGCTCTAGAAATATCTACGATACAGTTCCCGCCT 2208304 30 100.0 35 .............................. AGGCCGCGCAGGAGAAGGCGCGGCGCGAGGTTGAA 2208239 30 100.0 37 .............................. TTGTTTTTTTATGAATAGTCTGCGATCCCCCTTTTTG 2208172 30 100.0 39 .............................. GCGTAGTCTCCTCCTCGAGAACGTCAGGAGAATACCCCT 2208103 30 100.0 35 .............................. ACAAGCCGGGGTGAGGGACAGGTTCCGATCTGGGC 2208038 30 100.0 36 .............................. GTGATAACCAGGTTATGGTCTAAATCCATTTCGGCA 2207972 30 100.0 36 .............................. CGTTTCCTGTTGAAAAAGTGGCTGATTTTTTCGAGA 2207906 30 100.0 36 .............................. CCTATCCTTAAAACTATTTCCCTACTTCTTATCCAA 2207840 30 100.0 39 .............................. ATGCGTTTTGATGCCCAATAATCTAGCATTTCATCAGTA 2207771 30 100.0 35 .............................. ACCCTCATCGAGTAACTTCTGATTAGGTTGTTTGG 2207706 30 100.0 36 .............................. TCATAAGCTCGGCCTCCTTTTCTTCGCATTTTAAAC 2207640 30 100.0 37 .............................. CCAATCGGGGGAAGCGTATCTCCACCTATCCGTTCAA 2207573 30 100.0 37 .............................. TAGCGCGGAGGGCGGAGACGGCACTATCTCCTATACG 2207506 30 100.0 36 .............................. ATCGGTCGCCTCACCAGAGACCCAGAAATGAGATAT 2207440 30 100.0 36 .............................. CTCGTCCTCGTCCATGCAGGAGCAGGACGAGTAGCG 2207374 30 100.0 36 .............................. TGGCTCTATGCTCCCCAGGTTCTCAAAGAACCCTGG 2207308 30 100.0 37 .............................. TGGTAATCAGCTTTGCCTGAAAGCAGGTTTTTGGCAA 2207241 30 100.0 37 .............................. AATCATAAAGTCAGCGCTTCTGGCCAGATGTTCAGGA 2207174 30 100.0 36 .............................. CTTCCCCGTTCTCCATAGCCTGCAGGTACTCAATTA 2207108 30 100.0 37 .............................. AGTAAAGCAGGACCGAATGCCCAGACCTTACCCATGT 2207041 30 100.0 36 .............................. CCATTCCCCTAACCACCGATACTAACTTCCGGATCC 2206975 30 100.0 36 .............................. TAGGCATCAGACACCCCCCCCATAAAGTTTCCTAAC 2206909 30 100.0 36 .............................. ATCATCTCAAGTGCTTCCAGAGCAGCCGTTTCAACA 2206843 30 100.0 38 .............................. CGCCGGTCTCCGGTTTTTCCTCGCCCTCGCCAATCCAG 2206775 30 100.0 36 .............................. AGGGCGGCGAGAGCGGCACGAAGAAGTACCTGGTGA 2206709 30 100.0 37 .............................. ACAGTGTAGGATGGAAGGAATTCCTGGCCGGACTGAA 2206642 30 100.0 36 .............................. ACTTCCGCCACCGGCCACCACCTCCCGGCACATAAG 2206576 30 100.0 37 .............................. TCCGCATTCTCTCCGTCATACGTTCGCAACTGAGCTT 2206509 30 100.0 36 .............................. AAGCTGAAGCAAAAAGTTTCGGGCAGTACCTAGTGG 2206443 30 100.0 36 .............................. TGGCTCTATGCTCCCCAGGTTCTCAAAGAACCCTGG 2206377 30 100.0 38 .............................. CTGAAGTGCTGGAGCCGGAGTGGAAAAAGGCTATGCAG 2206309 30 100.0 36 .............................. CCGCAACTGCCGGTTGCTTGTATACTTCTGCCATCC 2206243 30 100.0 37 .............................. CCCCAGTCGATGTCCTCTTTGTCAGGGCCACCTGCCC 2206176 30 100.0 37 .............................. CCAGAAAGCATCAAGAAAGCCACGGCGTTTTCAATGA 2206109 30 100.0 36 .............................. TCTCATCCCTAACCCAGCGCCATCCGCCTTCCTCGA 2206043 30 100.0 35 .............................. GCCCACATAGGTTCTCAACTCGTACTCGCTCCGCG 2205978 30 100.0 35 .............................. CTTTCCAGTGTTTAAGAATAATACCAGCAATAGTA 2205913 30 100.0 41 .............................. AAGCTTACGAGGACATGCACGGCCTCCGGGTGCGTGGACAA 2205842 30 100.0 38 .............................. CGCAGTATCCGTACCCTCATAAACTATCACCGTTTAGG 2205774 30 100.0 39 .............................. CCCGCATCATCACACCTCCTCCTCGTAGCTGCGGCGGAT 2205705 30 100.0 39 .............................. TGGCTTTCAGAAAGGCGTCTACCAGTAAGCGCTGATTTA 2205636 30 100.0 37 .............................. TCAAGCTTTTACGGATTGCCAACCGGTTCATCCCCTC 2205569 30 100.0 37 .............................. CCGAACAGAAAACCGGCACGGTGTCCGGCCACGCCGG 2205502 30 100.0 37 .............................. CATCGCCCTATCCGGTGCTGACCGTCACCCATCTACC 2205435 30 100.0 36 .............................. GATAGCCGGCAAGCTTCTTCGCCACCGCCAGGTTGA 2205369 30 100.0 36 .............................. GCCAGTGATAAGGCGAATCCGGGTTCGTGGTGCCGA 2205303 30 100.0 35 .............................. GCCCACATAGGTTCTCAACTCGTACTCGCTCCGCG 2205238 30 100.0 37 .............................. CCCGGTCGTCCATGCGTCCTGGCCCTGCTTGATGGCA 2205171 30 100.0 38 .............................. CTTTTTCCCCCGGTTTGATTTCTGCTTCCTGTTGCCGG 2205103 30 100.0 35 .............................. TCAGAATATGACGGCGTACCAGCAGGCTCAACTTG 2205038 30 100.0 36 .............................. CGGCGTTGTGACAGCGGCAACGCCTAGTAATTAAGA 2204972 30 100.0 38 .............................. AAAGCCCCGTCAATCCTTGATTTTACTGATTTTCTCTG 2204904 30 100.0 36 .............................. ACACTGTTCACCGCCTGCAGCGGAGGGCGGGGGATC 2204838 30 100.0 36 .............................. GGAGGTAGAGACCATGTCGGACGAAATGGTTCCTGT 2204772 30 100.0 36 .............................. CCGGATATGGCCCACTCATAGGAAGCTCCGCAAAAG 2204706 30 100.0 36 .............................. GCACTATCCCACAAAGGCCCAGCCCAACTTACCACC 2204640 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 105 30 100.0 36 GTTTCCAGCCTACCTATGAGGAATTGAAAC # Left flank : CAAAATCTCGAGAGTGTTACACGGTTTCATGGTAACCTGCTGCAAACCTCCTCTGTTTCCAGCTTACCTACGAGGGATCAAACCGAATAGCTGTCGTGCGCCTCGCTGAGATGCCTAAAGTTTCCGGCCTGCCTGCAAGGGATGGAGAACCAAAGCGGGTATCGCCTTGTTGCGTGCGATGAGGCAAGTTCCCAGCCCCTCACGTCTGCCCCGCGGACCGACCCCTTTCTGGTATCAGCCCTGAGTGGACGCCTTTTTTCTCCCTCCGCGATCTTCGTTCTGGCGTTGTAGATGTTTGTTCCTTTGTAAAATTTCGAACTCCGGCAGGGAAATTGTCGTCGATGTCCAATAATGCAAAAAGCACTGGGGATCGACGACAACATGCTGAAGAGTGTAAACTGACGCAAAACGCGGGCTATCGGTGTGTCGGGCTTCCGAACTGGAGGCACCATCCAGAAAACAGCCAGAATGAAGAGGCTGTATTCGTGCGCCCCGAACTG # Right flank : CTTGCTGTGTTTGTTGATTTCTCCGCATCTCGGTTTGTTTCCATGTGATCGTCAACTAAAAAGTGATCCACTTGATCCAAAAAAGTGATCCACCCTGATCTTTTGAAACTGAACCATCCAGTGCAAAGGAGATAGATCTTTGTTTGCGAAGACTAACTAAAGGGTCTTGGCCTGTTATTCCTTTGAAGGCTGACGGTGTTTCATCCGGTACGATTCCCCATTCATGTTCAAGATGTGCGCTTATGTTTTAGCGGTCGACTAATGCCGCTCTTAACATCGGGTCTTCAAATAGTTCCGTCCAGCGGGAAAATTCAAGGTTTGTGCTAATGATGATGCTTGCCCTCTCCGTCCGCTACGCAATGAGCTTGAATAGTGGTTTCAAATGTATCGAGGGTTTTTATCACAGGGAAACTGGCAGCTTTGATTCTCCACTTGAGTTGATTTTGCTGCCTTTTTTCAACCTCAGTTTTCATCAGCTGATATAAAAATTCTTCATAGCA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : NA // Array 4 2440147-2439391 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2440146 29 76.7 37 ..GA-...AT.GT................. TATTCCGTTCCTTGCATTTCTTCCAAGCATCCAGAGC T [2440140] 2440079 30 96.7 37 ...A.......................... CCAAGGCAGATTATCCCAGGGAATTTGTCCCATGGTA 2440012 30 100.0 36 .............................. CGGCATTAGAGTTAGAAAAAAAGAGGGAGAAAGCAG 2439946 30 100.0 36 .............................. CCGCACCTACGGTTATTGCCGCAGTAACAGCATCAA 2439880 30 100.0 35 .............................. AGGCAATAAAGGATGATGAAGGAGAGGTAAAGGGG 2439815 30 100.0 35 .............................. TCAACTTCTTCCCCGTATACTGCGCCAACCGCGGC 2439750 30 100.0 37 .............................. TTACAAAGGGGGCGATAGTATATGACGCTAACGGAAA 2439683 30 100.0 35 .............................. CGACACCTCCTTAGCGGGCTGAATTTTTATCTGAC 2439618 30 100.0 37 .............................. GCGGCCAGGGGGAGAACTCCCTTCAACCCCTCTACCT 2439551 30 100.0 36 .............................. GTGGAGTCGTTCAGGAACAAATAACCGCCAAACCTG 2439485 30 100.0 35 .............................. GCCGGGCATGCCGAGGGGGAGATGAAAGCCAATGC 2439420 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 97.8 36 GTTCTCAGCGTACCTATGAGGAATTGAAAC # Left flank : AGGTTTAGTCTGTCGGGTGGCTCTTCTGCTAATAGCAACAGCTTCATAATACCGTATCGACCGTCCAGTAGGGTTTATCCCGAAAGACCACAACGGATAAGACGCTACAGTGCGTGGAGCAGCATGCATATCACCACCTGACTATTGTCTCTCAACCGATGAACCATTTATGTTGCTTTTTTCCATTTACCTCTGGAAACAAGCTTGGTTTGGTATGCGCTTTTTTAGAAAAATTTCTTAGAAATTTTGGTCCTTGGATCTTGACATATTACCGTAAGGCTTTAGCGGCTTTGGATAGTCAGGGCTGGTGCAGTGGCCTTTGAATGAGCAATCTGCCCTGCGTGCTTCCCAGATGGGAGCAACAATCAGTGGTGCACCAGGCCGCTGGGGTCCGTCTAAGTATCGGGCTCAAAGCACCAAGGTATTTCGACCTCGTTACCAGCCGCTGAAGGTTTTATTCGACTAGCACCTATTTTCATCCTCTGTTGGTGTCACCGGAG # Right flank : CCGTAATCGAAGCAGATGCGGCTTGACCCCCTAAAATTGGACAATTAGTCTTTGTTGCTAACTATTTCATAAAGTATCGTTGAATTGTTTAATCGGTTAATCGGAAGGCGGTGGCCTCGACTGCCACCCCGCAGGTGGTAGGCCAGGAACTACCGACGGGGTGGCTCCGGGGAACATGTAGGCAAGGTGTGCACGCCCCGTCGGAAAACACATTTTATGCGGGGTCCCCGGCCGTCAAGGCTTCCCTGACGGCGCCGCCCAAAGACCTCCAGGGCCCACCAAAGAACATGTTACACTTTTACTGGTTTTAACTCTACCTGGTTGTTTTTCAGCAGTTGATAGCATTCCAGCGGTGGTAAGTATTTAGTTGCTGAATGAATCCGGGTTTCGTTGTAAAAGTGGATGAAGTCGACAACCGTTGCATACGCTTCGGCATAGCTGGTAAACTCATGACGCGAGCATCCTTCGCTTCACAGGACAAACCGATATGGTAAGCTACA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 5 2445939-2443641 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2445938 30 96.7 37 ...T.......................... CCCGCATTGCGGGAAGGCACTCCCCGAGGAAACTATC 2445871 30 96.7 37 ...T.......................... ACATATACTGCTTGTGCATTGTTCCATACATCCTGAC 2445804 30 96.7 40 ...T.......................... TCAGGATAACAAGCGGTAATTTGTATCTTTATCCTGACGG 2445734 30 96.7 37 ...T.......................... GATACCTTGTTGGTGTAGGTAGCGAAGTATTCTCACC 2445667 30 96.7 34 ...T.......................... ACGCACCACCGGAAAAATCCTTTCAAGCATTTGC 2445603 30 96.7 37 ...T.......................... CATTTACATCGGCGGAGACGCAACACGGGATATTCCT 2445536 30 96.7 39 ...T.......................... TCTAGGAAAGAAACTGCCGGCGCCGGTGACCAGGTATCC 2445467 30 96.7 38 ...T.......................... GCAGGACAAGGCTGCTAAGGCTATTGCGACCGGTATAG 2445399 30 100.0 36 .............................. TGAAGCAAAGAGGTAAGTTCCATGATTATTATTCGC 2445333 30 100.0 37 .............................. TAAGGGAGAGCCTGTTTAGGCTCCCCCTCTTCCAGTC 2445266 30 100.0 37 .............................. TAAGGGAGAGCCTGTTTAGGCTCCCCCTCTTCCAGTC 2445199 30 100.0 34 .............................. CCAGGCTAACAAAGAGATGACGCTCGTACACCGC 2445135 30 100.0 37 .............................. CCCGGCCAAAATGCGTATATAATGAAGCAAAAACCGC 2445068 30 100.0 38 .............................. CTCCACCGACATAGCGGCGGCAATGGAGATTCTTGAAA 2445000 30 100.0 40 .............................. ACGCGAGCTGGGATACGGTTAATGGTGAGGAAGTCCGCAC 2444930 30 100.0 35 .............................. ATGGTCAAGCATTCGTGCCCGACCAAAAGCTGGGG 2444865 30 100.0 37 .............................. CCTGGGCGGCCAGCTGGTGAAGCGGGAGAAAAACTTG 2444798 30 100.0 34 .............................. CCAGGCTAACAAAGAGATGACGCTCGTACACCGC 2444734 30 100.0 35 .............................. CAACAATGCCAACGATTACAGTGGCAGTGTGCACC 2444669 30 100.0 35 .............................. AGGTTTGCTCACTACGTTGAATAGAGTTTTAGGGG 2444604 30 100.0 37 .............................. TCTTCATCATCCCAAAACTCCCAATCGCCAAATTGAA 2444537 30 100.0 36 .............................. GAGTGTTCTTGTATCTGCCGAGCCACATCCCTACGG 2444471 30 100.0 38 .............................. TCTCCATCTTTCACGCTCAGCTTCAGCGCCAGGGCAAT 2444403 30 100.0 37 .............................. CAACGCAGCGGCTTCGCCTTCCGCGCGGGGGGGATGG 2444336 30 100.0 35 .............................. CCCGGTGCCTCAATTCCCCGGCTCTCATTACAACC 2444271 30 100.0 37 .............................. TTGTGCCATAATTGCATTCCGCAATAAGATGATAAAT 2444204 30 100.0 35 .............................. TATCTGTGATATACCGTTTCGCCTAAACTGGCATA 2444139 30 100.0 38 .............................. CCTTCCCATACATACTCTTTATTTGTTCTATCAACTCA 2444071 30 100.0 37 .............................. ACTGCATAGCCCAGGCGAGAACGACCTTGCCAGCATT 2444004 30 96.7 38 ........A..................... GGCCATGAGCGGGCAAGCACCACCTCGGATATTTATGC 2443936 30 100.0 36 .............................. TTCTAAGGATAGCGACAGATTCGTGCGACGTTTCGA 2443870 30 100.0 36 .............................. ACTTTTGCATCTTAACCTTCTCATGTTTTTCTTTCC 2443804 30 100.0 36 .............................. CAGGGACTGCTCAGGGGAACTGACTTCGACACAGAA 2443738 30 100.0 38 .............................. GGTTTTGGGGGCGTCGCTTTATGCCCCCAATGTGCAGA 2443670 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 35 30 99.2 37 GTTCTCAGCGTACCTATGAGGAATTGAAAC # Left flank : ATGTCGCCCTGGGCTACAAACAGCTGCTGCTGGTGGAAGACGCCTTTCGTACCCTTAAGTCCCGGTTGGAGCTGCGCCCGGTCTACCACCGCCTGGAAGACCGCATCCGCTCCCATGTGCTCCTCTGCTGGCTGGCGCTCTTGCTGATCAGGATTGCCGAGAACAGAACGGGGCAAACCTGGTGCAGCCTCAGGGCCACCCTGCAGAGAATGCAGCTGGGAGAGTTCAGCGGAACAGCCGGTCAGGTACGGCAGCGGACCGAAACCACCCCTGCTCAGAAGCAGATATTCAAGGCGTTAGCCGTCAAAGAACCGCCACTTCTCTTCTCCATTAACCCCACAGCTAAGAAAAACGCCTAGTAACACACCTTTAAAAACATATTCACTGAATTCTGTGTCCCATGCGGCTTCCGGCCTTCTGTTTGTCTATGGACTGTCGAACTCCGGTATGAGGAATTGAAACTTAGAACACCTCCTCTAAATCAGCCTGCCAGCCGAGAA # Right flank : TCCTGACGGCGTGGTTTATGCATACAAGGAATATTATGTTCTCAGCGTACCTGCCCTGAAAATTAGCTTCACAAAAAAGGCAATAATCAAGCAGACCCTAGGCATTAAAGGGATAATGAGACTTAAAAACGAATAAAACTAAGAGCTCGATTATGCAACCTCGATGCTCACACGATAACCCAATTGTTCTAATTGCTTAACAGCACGATTGACAACCGCTTTAGAATTTCTTTTCTCAAAATAGTCACCGCCGAGATCATGATAAGGCACTCTTCTAATCAACATGTAATAAACGCTGACCAAAATAGAATGAGCAACAGCAACAGCAGCCCTGTTAGCGCCTCTTCTGGCAGCAACACGGTGATACAGAGCGGAAAGGTAGGTGTTTTTAGTGCGGGAGGCAGCCCTGGCAGCCTGGATCAAGGTAGTGTGTAACAGCGTATTACCTTTGGTTGTTTTACCGCTCTTGCGTTTACCGGCGCTTTCATTATTGCCGGGGG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTTCAGCGTACCTATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 6 2448112-2447887 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2448111 36 94.4 31 ..TC................................ AGAAACGTTCTTCGATGATATTATGAAGTAC T [2448110] 2448043 36 94.4 29 ..G................................G GAACGAAATGAATGCAAAGTTTGAACAAT 2447978 36 100.0 20 .................................... GAGCCTCGTCGGCACTATCT 2447922 36 63.9 0 .C.....................CCGGAGTTCGAC. | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 88.2 27 ATCGGTTTTCAGCGTACCTATGAGGAATTGAAACAA # Left flank : TTATAGATCGGCTTCCAATAAACCCCGGTACTTTCCATGGCCACATGTGTACAGCCTTTGCTGGTAAGCCAGTCAGCCAGGTTTAAAAGATCTCTGGTCATGGTACCAAATGTTCTTATTTCCTTTTCATCTGGCGTAATAACGCAGGCAACGACAGAGTTTTTGTGAACGTCCAAACCACAACAGTACGGGAACACGACATCCATCAAAGATCCTCCTTTAGCGGCTTTGGATAGTCAGGGCTGGTGCAGTGGCCTTTGAATGAGCAATCTGCCCTGCGTGCTTCCCAGATGGGAGCAACAATCAGTGGTGCACCAGGCCGCTGGGGTCCGTCTAAGTATCGGGCTCAAAGCACCAAGGTATTTCGACCTCGTTACCAGCCGCTGAAGGTTTTATTCGACTAGCACCTATTTTCATCCTCTGTTGGTGTCACCGGAGGTGACATGATTGTCTATGAGGAATTGAAACTGAACCGGAACTGAAACACCCCCGCATGGTAT # Right flank : CTAACGAGGCATTCAGAGCGAAATTTTTGAAGAGCGATCCTTTAATATCAAGGGTTAGCGGGTTTGGGAGTGGAGAAAAAGCGAAAAATGCATAGGCACACGTTTTGTGTTATATCTCTTGTTGTATGGATGGTACATGTGGTATAATGTAGACATGTACATCCGAACCATCCAGCGCAAGAACAAAGACGGCTCCGTCGTCCGCTACATCCAGCTTGCCCATAATCAATGGGACCCCCAGGCCAGGTGCGCCAAGGCCAAAGTGCTCTTCAACTTCGGGCGTGAAGAGGAGGTCGACCGGGAGGCATTAAAGCGTCTAGTAAAGAGCATCAACCGGTTCCTGGGGCCCGGGGAGACCCTGCGTTATGAAGCGGAAACAGGTGCAGCACCCCTCAAATTTATCACCAGCCGTCCACTGGGAGGAGCCTGGGTCCTGGACAGGCTCTGGGAAGAGCTGGGGATCAAAGGCGTACTTGAAACCCTGCTCAAGAAGCGGCAGT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.41, 5:-1.5, 6:0.25, 7:-0.39, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGTTTTCAGCGTACCTATGAGGAATTGAAACAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 7 2451061-2449772 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2451060 30 100.0 38 .............................. GAAGAACCGAGGACGGTATCATGAGGGTATTGTCCGGG 2450992 30 100.0 36 .............................. ATGAAGATCAATCGATATATCAGCAGCAAACTCTCC 2450926 30 100.0 37 .............................. CTTGACGGTGAGTTTATTGGGATGGTTCATTAGGAAG 2450859 30 100.0 36 .............................. TCCTCCGCTCATAACGCCGGATCGCGCCGCAGTGAG 2450793 30 100.0 35 .............................. GAAACGCCTCCATGCAACGTAGCAAGAGCTTTCTT 2450728 30 100.0 38 .............................. TGCTCTCTCGCAATGGCTTATTTAAATTTGGTAGTCCA 2450660 30 100.0 36 .............................. AGAACAGGGGCAAGGGAAACAAAGGAAAATTCTCCT 2450594 30 100.0 35 .............................. TACGAAATCCGCCAGTACGGGCCTGCGTCGTTCCA 2450529 30 100.0 35 .............................. CGTCATCCTTGCGGCAGGCACCGGCCGGCCGGGGA 2450464 30 100.0 35 .............................. CTTTGATAGGACAACACCCTCTTCCAAATCTGGTT 2450399 30 100.0 36 .............................. CATCTCTTCAAGAACAGCAAAGAATGTGTGCTTGTC 2450333 30 100.0 36 .............................. GCGACGTTCTTCCTCATTTCGCATTCCTCCCTTTTT 2450267 30 100.0 35 .............................. ATCTCCTGCAGCGGATAATACTTACCGGGGCATGC 2450202 30 100.0 38 .............................. CAATAAATCATAATACGACACGAAACGGTAGCTTCCTC 2450134 30 100.0 35 .............................. GGTAAGGGGAGTAATTACTTCGTTTCTTTCCCGGA 2450069 30 100.0 36 .............................. TCGAAACACCCGCACTTCTCTCCTATACAGTTTCGG 2450003 30 100.0 37 .............................. GAATCCCGCCGGTTCGTCCGGTAGCTCCGAAAGCGGG 2449936 30 100.0 37 .............................. TGTAAGCATGTGACGCCCCCGGATATTGCTTTGCTCT 2449869 30 100.0 38 .............................. GAAACGAAAAAGAAGCATATTGGCAGGAGTGGTTCCGT 2449801 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 20 30 100.0 36 GTTTTCAGCGTACCTATGAGGAATTGAAAC # Left flank : CGCAGCCGGCCCGTGCTGGAGGACTTTTTGGCATGGCTGAAGAAGCAGAAAGCGAAAGTGTTGCCCAAAAGTACCTTTGGGCAGGCGGTTTACTATTGCCTGGGCCAATGGGATAAGCTAACGGCCTTTTTACAAGACGGGCGTTTGGAAATTGATAACAACCGCAGCGAGCGTTCTATAAAACCCTTTGTTATTGGCCGCAAGAACTGGCTATTTGCCAACACCCCTCGGGGTGCGAGGGCCAGCGCTATTGTCTACAGTATCATAGAAACGGCCAAGGAGAATGGGTTAAACCCCTTCCACTATCTCACTTACCTCTTCGAAAAACTTCCCAACCTGGACCCCCAGGATGAAGAGGCGTTGGACCGGCTCCTCCCCTGGTCCGAAACCTTACCCCCTACCTGCCGGTGAATTAATTGGAATGCTTAAGCCCCCACCTCAAACACAAGGTGGGGGTTATTTTACGCTTACGACGAGAGGATTCAATCTAAGGAGGCGAT # Right flank : TGCCCAAAGAAAAAGACTGGGAAGGAATACGAGTTTTAGTTTTCAGCGTACCTGCCCTGAAAATTAGCTTCACAAAAAAGGCAATAATCAAGCAGACCCTAGGCATTAAAGGGATAATGAGACTTAAAAACGAATAAAACTAAGAGCTCGATTATGCAACCTCGATGCTCACACGATAACCCAATTGTTCTAATTGCTTAACAGCACGATTGACAACCGCTTTAGAATTTCTTTTCTCAAAATAGTCACCGCCGAGATCATGATAAGGCACTCTTCTAATCAACATGTAATAAACGCTGACCAAAATAGAATGAGCAACAGCAACAGCAGCCCTGTTAGCGCCTCTTCTGGCAGCAACACGGTGATACAGAGCGGAAAGGTAGGTGTTTTTAGTGCGGGAGGCAGCCCTGGCAGCCTGGATCAAGGTAGTGTGTAACAGCGTATTACCTTTGGTTGTTTTACCGCTCTTGCGTTTACCGGCGCTTTCATTATTGCCGGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 8 2455337-2453564 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 2455336 30 100.0 36 .............................. GAAACGCTAAAAAACTCATAAAAGCAGGAGGGAGAA 2455270 30 100.0 39 .............................. ACCCCACCAGATCCAGGAGAATCCGCTTTACCGGCCCGG 2455201 30 100.0 38 .............................. TACTTCGATAACTTCATACTCAGCATCGGGACGCATAA 2455133 30 100.0 39 .............................. AGAACTCACGAGCAGTCACGATTCATCAGCACTCCTTTC 2455064 30 100.0 39 .............................. GCGTGAGCGATTCTCGGGGCACGGCGGCACGATACGCCA 2454995 30 100.0 37 .............................. CATAGTAACCACCGAGGAATCTGTTCCCGTAATCATT 2454928 30 100.0 37 .............................. AATTAAGTTTAAGGAGGTCTTGAAATGTCAGTTGCTG 2454861 30 100.0 42 .............................. CTAGTGTAAGACCTGTCTGGTGGTCAGATGGTAGTTTTCTGA 2454789 30 100.0 36 .............................. TCAGCTTACACTTTCGGGAGGGATTGCATCTCTTCC 2454723 30 100.0 36 .............................. TTATACTTTTACGACATATAATGCAGATGGTACTGA 2454657 30 100.0 37 .............................. GAAGAAAAACGTAAAGAACTCGTTAAACCTTACAACG 2454590 30 100.0 37 .............................. ACAAACTGGAAGCCGGCAGAGAGTTGGACGCACTGGT 2454523 30 100.0 36 .............................. CGGCATGGGCGGCGAATATTTATCCCGGCGAAACTG 2454457 30 100.0 36 .............................. TCCGTAATCACCGCAGCCCCATCCGTAAAGGATTCC 2454391 30 100.0 36 .............................. GCAGGATTCTCAAGGTAGAGGTCATCAATCTCCTTT 2454325 30 100.0 36 .............................. TAAAGCTCCACATCCGACCGCGCATCGCCTTCAACT 2454259 30 100.0 36 .............................. TGGAGACTGCTCAGCTACTGCATTTCCTTGGTTAAC 2454193 30 100.0 36 .............................. GACATCCGAAAAAGAAATGAAAGGAGTGCTGATGAA 2454127 30 100.0 37 .............................. CATCTCTTCAAGAACAGCAAAGAATGTGTGCTTGTCG 2454060 30 100.0 39 .............................. TGGTATATATAGACCTAACTCCTTCGTGATGTACTTTGA 2453991 30 100.0 36 .............................. CAGGATTACGCTGGAATTTGAATGAAAGGAGGAGGA 2453925 30 100.0 36 .............................. ACGACCATGAACACCTTACTTCCTCCTCCTTTCATT 2453859 30 100.0 35 .............................. TCGGGCAAGCCTATTTTACTCCGCCGGCAGGCTCC 2453794 30 100.0 38 .............................. TTGAGCTTCTCCGCGTATTTAAGTGCTTCAGATGCATC 2453726 30 100.0 36 .............................. ATGTTGTGAATGATGATGGGATTCCGCTTGAAGAGC 2453660 30 100.0 37 .............................. TCCGTTAGCATTTGCTAAGGATGAGGTGGTGGTCAAA 2453593 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 27 30 100.0 37 GTTTTCAGCGTACCTATGAGGAATTGAAAC # Left flank : TTCAGCGTACCTATGAGGAATTGAAACGGATATCTGCGCAGTTCGGGCACACCTCCGGCACATGTTTTCAGCGTACCTATGAGGAATTGAAACGCCCTGGTCATCGTCATCTTTCATACAATCACACACCGGTTTTCAGCGTACCTGCCCTGAAAATAGATTGCATACCCTGCCGGTCTACCGCTCGACTCCCGATTCCAGGCCGGACAGGACGACGGCTCGCTTTGGGACAGCCCTGGGATGCTGCGTAACATGTTACAAACTGCTTCTGCCAATCGCAGCGTTTGGCCACGCAGCAAATCCATTCCGTTGAAACTCTTAAGCTCGCATTCCGGCCTGTCATCCTCGCTTCGCCTGTCCTGTTACCCGGCCTTCCATAGGTCGCTCGCCGGCAGACCCCGGGTATTTTCATTCTCTGATGGTGCCGCCGCTGGCGGCATGGTGGTCTATGAGGAATTGAAACCAGAACGATATTTCAATCTACATAAAATTGAAAATGT # Right flank : TGCAGATGACGAGAGGTAAGCGTCAAATACAACCCACCTTGGCACAGTGCTCGAGATTAAGGGATAATCTTCCTCAGAAAACGAACTGAGGAGGATTTCCCCTTATGACCAGAGCCGAATTACAAAAACTTTGGGAAGCTCGCATAGCCGAATACAGGGAAAGCGGGCAAAGCGTTAAAGAATGGTGCGCCTCCCACGAAGGCATTAACCCCAGGCAGTTATGGTACTGGCTGCGGAAGTTTAAGAACCAGACCCCGGCTCCTCCGGAGATTTCCAACCGGTGGCTGTCGGTAGAAATAAGCGAGGAAGATTCCCTAGAACAGGCCCTACTGGTCAAAATAGGACCGGCCAGCATCGAGGTAAGACCCGGCTTTGACCCGGCCTTACTCACCAAGGTAGTTCAGGTGCTGATGGCGTTATGCTAAACGAAGCTGGTATCGACCGGGTTTACCTCGCCTGCGGAGCAACAGACCTGCGCAAATCTATTGACGGCCTGGCGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 9 2458091-2455744 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2458090 30 100.0 37 .............................. TCCGGGACGGTATTGAGTATGAATTCACCATCTTTCT 2458023 30 100.0 37 .............................. AATATACAAGCCCCATAATCATCCCGATTTTTCTCTT 2457956 30 100.0 36 .............................. TCAACCCCCTCGTATCCAGTTAAAATTCCGATGCCG 2457890 30 100.0 36 .............................. TGGGCTCTGCTCGCCGGGTGCTTCTTCACCTCTACC 2457824 30 100.0 36 .............................. TAGGACTTTTTTCCTAACTTTAGTGGAAACTTCTTC 2457758 30 100.0 36 .............................. GTTTTAGCGATGCGGCTTTAAAAGACCTTGAACAGA 2457692 30 100.0 37 .............................. AGAGCGCCGACCGCGGGGCAGGTAATATGATAATACC 2457625 30 100.0 36 .............................. GCAAGCACCGTCATTGCGCTCATCACGCCTGATGGA 2457559 30 100.0 35 .............................. TTCAACAAAAGTGTGCCAAAAAATGCAAAACAGAA 2457494 30 100.0 35 .............................. GGAAGGGGATCTCGAGAAGGGACTTTCTATTCTTG 2457429 30 100.0 37 .............................. TGGCGCGATAGGACGAGAATATGCCACTTTCCTCTCT 2457362 30 100.0 36 .............................. CTTCGAGGAGCTTCATCATGCCCTCGATCACGCTAA 2457296 30 100.0 36 .............................. TAGGAAAAGAAGGATATTGTTTACTTATAATAGATG 2457230 30 100.0 38 .............................. CTTCCAAATCGACAAATTCCGCAATCACCCTGTACTTC 2457162 30 100.0 36 .............................. TAAGAACCTTCCCGTTCTTCTAATTCCCATGTAATA 2457096 30 100.0 37 .............................. CCCGAGAAGAGCAAGTCCCTTCTCGAGTTCTCCTTCC 2457029 30 100.0 36 .............................. GAGGTGCGTCGCAATGGTAGAGCTTGAATTTCTTTT 2456963 30 100.0 37 .............................. CCGTACAACTCCATCAAATTAGGTTCAGCAGATTCCG 2456896 30 100.0 36 .............................. AACTTCGGCAATTAAGTCTCTTAACTCCTTATCTGT 2456830 30 100.0 35 .............................. CCTGTTTCCCAGATAACTGGGAGACAGGAAAGAGG 2456765 30 100.0 34 .............................. ACCGAGCAGGGAATCGACTGGATAGAAGTCCCGC 2456701 30 100.0 38 .............................. AAGGAAACCCGTACGGAAGAGATAGAAGCCCTTGCTCT 2456633 30 100.0 37 .............................. TAAAAAGTGCTATCACAATATCCCCCCTTACTCCACA 2456566 30 100.0 36 .............................. GCAGGAGCCGCAGCCGCAGCCGCAGCCTTAGTCGGC 2456500 30 100.0 35 .............................. CATCTCTTCAAGAACAGCAAAGAATGTGTGCTTGT 2456435 30 100.0 37 .............................. TGGGGCGCGGTCAGGGTGGGCGTGCCGTAAAGCGTGC 2456368 30 100.0 35 .............................. TTAATCGACTTGGCAGAGAAAGGAAGAATTACCCC 2456303 30 100.0 36 .............................. ATGTCATTTTTATCCCCTCTCTGCATCCTAAGCATG 2456237 30 100.0 36 .............................. GGCCATTCCAACATATCCACAACGTCAAAGTATCTC 2456171 30 100.0 36 .............................. CCTTTGGACACCTCAAAAGTGAAAGTGCATCTCTGG 2456105 30 100.0 37 .............................. TGTATATGTCCGCCAACACAATTTCACCCAGTTTCTG 2456038 30 100.0 38 .............................. GATTACTAGGATTATTATGGCGACGGCAAACTAAAAAG 2455970 30 100.0 36 .............................. TGGCGACGGCAAACTAAAAAGTCAAAGAAAGTCAAA 2455904 30 100.0 35 .............................. CCACTTCCATCGGGTTCCTACCGTCTACTACCGGG 2455839 30 100.0 36 .............................. GGATATCTGCGCAGTTCGGGCACACCTCCGGCACAT 2455773 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 36 30 100.0 36 GTTTTCAGCGTACCTATGAGGAATTGAAAC # Left flank : GGACCCAGGCTCCTCCCAGTGGACGGCTGGTGATAAATTTGAGGGGTGCTGCACCTGTTTCCGCTTCATAACGCAGGGTCTCCCCGGGCCCCAGGAACCGGTTGATGCTCTTTACTAGACGCTTTAATGCCTCCCGGTCGACCTCCTCTTCACGCCCGAAGTTGAAGAGCACTTTGGCCTTGGCGCACCTGGCCTGGGGGTCCCATTGATTATGGGCAAGCTGGATGTAGCGGACGACGGAGCCGTCTTTGTTCTTGCGCTGGATGGTTCGGATGTACATGTCTACATTATACCACATGTACCATCCATACAACAAGAGATATAACACAAAACGTGTGCCTATGCATTTTTCGCTTTTTCTCCACTCCCAAACCCGCTAACCCTTGATATTAAAGGATCGCTCTTCAAAAATTTCGCTCTGAATGCCTCGTTAGTGTCGAACTCCGGTATGAGGAATTGAAACTACTCCCAGAGCACGTACATCCGCTCACAGTCCATGC # Right flank : GCCCTGGTCATCGTCATCTTTCATACAATCACACACCGGTTTTCAGCGTACCTGCCCTGAAAATAGATTGCATACCCTGCCGGTCTACCGCTCGACTCCCGATTCCAGGCCGGACAGGACGACGGCTCGCTTTGGGACAGCCCTGGGATGCTGCGTAACATGTTACAAACTGCTTCTGCCAATCGCAGCGTTTGGCCACGCAGCAAATCCATTCCGTTGAAACTCTTAAGCTCGCATTCCGGCCTGTCATCCTCGCTTCGCCTGTCCTGTTACCCGGCCTTCCATAGGTCGCTCGCCGGCAGACCCCGGGTATTTTCATTCTCTGATGGTGCCGCCGCTGGCGGCATGGTGGTCTATGAGGAATTGAAACCAGAACGATATTTCAATCTACATAAAATTGAAAATGTGTTTTCAGCGTACCTATGAGGAATTGAAACGAAACGCTAAAAAACTCATAAAAGCAGGAGGGAGAAGTTTTCAGCGTACCTATGAGGAATTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 10 2463402-2460037 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2463401 30 100.0 36 .............................. CCCTTTGGGCCGATGACAACCTGACGCCAGGTTTCA 2463335 30 100.0 36 .............................. TTGAAGTGCCCCGGCATAGTGCATCATATAGTTTTT 2463269 30 100.0 36 .............................. TAGGACTCAGGGGCGGCAGAAATCTCAAGGTGAGCC 2463203 30 100.0 36 .............................. CAAGAACTCAGGCAAAAACTCGGTAATCTGTGTGAT 2463137 30 100.0 37 .............................. CTTCATATATCGCAGTGTCCGTTCGTCTGCCGGCTCG 2463070 30 100.0 35 .............................. TCCGGAGGCATGGGCTCTGGACTGAGGGGCTCGCA 2463005 30 100.0 37 .............................. ACTGCTACCTGGGGGCTAAGCCTTTGGGAAGAGCAGT 2462938 30 100.0 38 .............................. AACAGATCCGGGCCGAACACAACCTGGCTTACGGCAGC 2462870 30 100.0 37 .............................. ATCGGTATTCCAGCCAGGGTTGCCGGAATATCCCGTG 2462803 30 100.0 36 .............................. ACATAACTGTAACCGTAGTCGTCGTTTACATCGCCG 2462737 30 100.0 40 .............................. AAAATAAAGAACTTGAATATCTTGCCGAATCAACACGTTT 2462667 30 100.0 37 .............................. AAATGAACCCGACGATCCAGGAAAAAGAGGAATTTTT 2462600 30 100.0 36 .............................. TTCTTCCTTCTCGCCCCGGAGAAGGACTTTATCCAC 2462534 30 100.0 37 .............................. CAGAAGTTGCTACAACAATTGAAGGTGCTAAAGCTGC 2462467 30 100.0 35 .............................. CGATGCCCTTGCTCCCGTTGCCGCAGAACTTGCCC 2462402 30 100.0 36 .............................. CATCCACGAGAAAGAGTTCGATGAAGAGTGGAAAAT 2462336 30 100.0 37 .............................. TAAGGCCGGATGCGGAGAAACCGTTCATCGTGGTCAG 2462269 30 100.0 39 .............................. AAACCAGTACCCAGATCGCCGGCGGCTGGGGCGGAATGC 2462200 30 100.0 36 .............................. GGCATTGAACGAAGACCCGCAGTAAAGGCTACAGGA 2462134 30 100.0 38 .............................. CGACCACCGAAGTGTTCAGCATAAATTAACCAGGCCTG 2462066 30 100.0 38 .............................. GAAAGTGCCAAGAAGGACGAAGGGGACGGTAACGTATC 2461998 30 100.0 38 .............................. CATGGCACAGAGCTTACCATTTCGGTGCCCAACATTGG 2461930 30 100.0 37 .............................. CGCATAAGGGATGCCGCCGCAGGTACATCTCTCGATA 2461863 30 100.0 36 .............................. GCGGATCCAACGCCGTAAGCAACCAGAATCCCGGTC 2461797 30 100.0 40 .............................. CCGGGATATCAAACAGATTGTAGAAAGCACAATCCGTTCC 2461727 30 100.0 37 .............................. ATGTTTGTAACTCCGCTTTCAACCTATCGCGTTCTTA 2461660 30 100.0 37 .............................. CCACAATAGACAGGCAAACGCTTTTCTTTATACTGCC 2461593 30 100.0 36 .............................. CAATCCGAACTCTTGAGGATGGAATTTCCAGACCCG 2461527 30 100.0 35 .............................. TGATTCCATATATTCTTTTGCTACCCGCTCTTTCA 2461462 30 100.0 38 .............................. TTCGGCCGCGGCCTCCCGCTCGGCCCGCAACCTTTTGA 2461394 30 100.0 37 .............................. TTTCTTTATAGGCCAAATCGTCCGCTCGCGTTTCTTC 2461327 30 100.0 36 .............................. ACCGCATCAGCCACCATCTTGGTCAGTTCTTCTTTG 2461261 30 100.0 37 .............................. TCATCAATCTCCAACAACTGGTAAGGCGTTCGGTTGC 2461194 30 100.0 36 .............................. ACGGGTGCAATTCCGGAACTGCAACATAATACCCCT 2461128 30 100.0 36 .............................. CATCTTATGAACTACCACGTAAAAGGCTTCTTCAAG 2461062 30 100.0 37 .............................. TCCTCGTCCCCGTATGCATCCCACGCCCCGCCGAACC 2460995 30 100.0 36 .............................. CTGAGTAGTCCTCGTAGTAGTCCAGGCGCTCCCGCA 2460929 30 100.0 35 .............................. GATTTGACACCAAGACGAAAGAAGTGAGAGAGGAG 2460864 30 100.0 39 .............................. TACAATGGAAACAGGAAACAAACAAAGGGGGGAACGAAA 2460795 30 100.0 35 .............................. TCTATGATGGTCGTTATCATGTTTACCATGCTTCG 2460730 30 100.0 35 .............................. AGAAGCCTTCCGCTTTTTAGCCGGGCATTCGGAGA 2460665 30 100.0 36 .............................. ATTCTACATCAGTAAGAGGACAAACGTTTTTTGCGT 2460599 30 100.0 37 .............................. GTGAAAACAGGCCAGGCAGAAACGACCATCAGTGCAC 2460532 30 100.0 38 .............................. CGATGCTTGGGTGCTATCTGGGTAAGGGGAGTAATTAC 2460464 30 100.0 36 .............................. TTGAGCTTCTTCGCGTATTTAAGTGCTTCAGATGCA 2460398 30 100.0 36 .............................. TTCGGGTACTTCTGGACATCCGAAAGTGCCCAGAAA 2460332 30 100.0 35 .............................. CCTCGTCAATGAGCCTCGGGCGACATGCTTTGATT 2460267 30 100.0 35 .............................. ACTTTGGATTATCAATTACGGCTGGAAACACCCCC 2460202 30 100.0 37 .............................. CACTTCTTGCCGTTCAATCGCAAGAAAGGAGGGCATC 2460135 30 100.0 36 .............................. AGCGTAATCCCAGGCCACCGAGAACATTTTCTCGGC 2460069 30 90.0 0 ......................G....C.G | C,CC [2460041,2460048] ========== ====== ====== ====== ============================== ======================================== ================== 51 30 99.8 37 GTTTTCAGCGTACCTATGAGGAATTGAAAC # Left flank : TTTCAGCGTACCTATGAGGAATTGAAACATGCTTGGGCAGTCTGTGACTGTGTTAGGTTGCAGGGTTTTCAGCGTACCTATGAGGAATTGAAACGATACTGCCTCACGACATCCCGAATCTCTGCCAGTCGTTTTCAGCGTACCTGCCCTGAAAATAGATTGCATACCCTGCCGGTCTACCGCTCGACTCCCGATTCCAGGCCGGACAGGACGACGGCTCGCTTTGGGACAGCCCTGGGATGCTGCGTAACATGTTACAAACTGCTTCTGCCAATCGCAGCGTTTGGCCACGCAGCAAATCCATTCCGTTGAAACTCTTAAGCTCGCATTCCGGCCTGTCATCCTCGCTTCGCCTGTCCTGTTACCCGGCCTTCCATAGGTCGCTCGCCGGCAGACCCCGGGTATTTTCATTCTCTGATGGTGCCGCCGCTGGCGGCATGGTGGTCTATGAGGAATTGAAACCAGGTCAAAAACCTCCTGCCTGGGGTTGAAGCGGTCCG # Right flank : TCCATAGACAAACAGAAGGCCGGAAGCCGCATGGGACACAGAATTCAGTGAATATGTTTTTAAAGGTGTGTTACTAGGCGTTTTTCTTAGCTGTGGGGTTAATGGAGAAGAGAAGTGGCGGTTCTTTGACGGCTAACGCCTTGAATATCTGCTTCTGAGCAGGGGTGGTTTCGGTCCGCTGCCGTACCTGACCGGCTGTTCCGCTGAACTCTCCCAGCTGCATTCTCTGCAGGGTGGCCCTGAGGCTGCACCAGGTTTGCCCCGTTCTGTTCTCGGCAATCCTGATCAGCAAGAGCGCCAGCCAGCAGAGGAGCACATGGGAGCGGATGCGGTCTTCCAGGCGGTGGTAGACCGGGCGCAGCTCCAACCGGGACTTAAGGGTACGAAAGGCGTCTTCCACCAGCAGCAGCTGTTTGTAGCCCAGGGCGACATCTTCGGCGGAGAGGGTGTCGTCCGAGGTGCGCAGCAGGTATTTGCCGTCGAGTTTTTCTTCTTCCCTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 11 2464504-2463808 **** Predicted by CRISPRDetect 2.4 *** >NC_018870.1 Thermacetogenium phaeum DSM 12270, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2464503 30 100.0 37 .............................. CCGCGGAACTCGACCCGACCATGCGGCATTCTCCCTC 2464436 30 100.0 35 .............................. TGAACATACTTTGTTCCTCCTTCCGTAATTTTCCA 2464371 30 100.0 37 .............................. GCGAGTAGGGGATGCGGATGCAGTTTGCGGCTTCGTT 2464304 30 100.0 36 .............................. GTAAGTACATGGAAAGGCTGGAATAGGAATGGAGAA 2464238 30 100.0 36 .............................. TCTCTTCAACGCTCTCTGCTTTTTCGATAATGAAAA 2464172 30 100.0 36 .............................. AAGATATACGGCAATTGTGTGGTGATGAGCTTGAAC 2464106 30 100.0 38 .............................. ATATTTTGACAGTTTACCGCCTGGGGTTTTCACTTCAA 2464038 30 100.0 36 .............................. GCAAACTGCTCTATCAACCAATTCAACACATTTGCC 2463972 30 100.0 39 .............................. TATGTCGTAAAAGTATAATAATACACACCTCCCTCTAGA 2463903 30 100.0 36 .............................. ATGCTTGGGCAGTCTGTGACTGTGTTAGGTTGCAGG 2463837 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 100.0 37 GTTTTCAGCGTACCTATGAGGAATTGAAAC # Left flank : AAGACCGTCTATTATAAAGATTACGTTGTAAAGGGATGGCTTGGGCAGTATCTCCTGAGGGGGACCCCTGAGTTGCTCAACATCGCCTATGATGCCGGAATCGGAGCGAAGAACTCCCAGGGCTTTGGTATGGTTGAAATTATATGACGCAGCTTCTGCACATTAAATGAAAAGCACTACTATGATAGATAAACTGACTGAGACGGCATGATACAACGCCCCGAATTGATTCGGGTGTTCCCAAAGAGACTTTTACTGAGATTCGACAATGTCTATATGCTGGTTTGTACTGACAACCTTGAAAAAGTGAAAAAGATAGAGGGGGAATCAGAAAAAGAAAAATGGCCTTTTGTGCTGTCGTCGACCCCGAGTAGCGTAAAAACTACCGGGGATCGACGACAGCAAAAAGTCCGTAATGAAGCCAGAAAGCCCTTAAATCCAACAAAAACCCCTCAACGGGTAAAAATCCATGAGGGGGCATTTTTGGCGGATCGTGACGG # Right flank : GATACTGCCTCACGACATCCCGAATCTCTGCCAGTCGTTTTCAGCGTACCTGCCCTGAAAATAGATTGCATACCCTGCCGGTCTACCGCTCGACTCCCGATTCCAGGCCGGACAGGACGACGGCTCGCTTTGGGACAGCCCTGGGATGCTGCGTAACATGTTACAAACTGCTTCTGCCAATCGCAGCGTTTGGCCACGCAGCAAATCCATTCCGTTGAAACTCTTAAGCTCGCATTCCGGCCTGTCATCCTCGCTTCGCCTGTCCTGTTACCCGGCCTTCCATAGGTCGCTCGCCGGCAGACCCCGGGTATTTTCATTCTCTGATGGTGCCGCCGCTGGCGGCATGGTGGTCTATGAGGAATTGAAACCAGGTCAAAAACCTCCTGCCTGGGGTTGAAGCGGTCCGGTTTTCAGCGTACCTATGAGGAATTGAAACCCCTTTGGGCCGATGACAACCTGACGCCAGGTTTCAGTTTTCAGCGTACCTATGAGGAATTGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCAGCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //