Array 1 118-4182 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYCI01000033.1 Flavobacterium psychrophilum strain DK095, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 118 46 100.0 31 .............................................. TTACTCTGAATAAGGTTGTTTTGATGGCGTG 195 46 100.0 30 .............................................. TTTACAGACGAAAAGGATAGTGCATTACTA 271 46 100.0 30 .............................................. AGATTATTTTGATTACATCAACGAAATTAA 347 46 100.0 30 .............................................. GCTCTACAATTCCAGCATCATATAGTTCAA 423 46 100.0 30 .............................................. TGGCGGAATTAAAAGACCAAATGGGTTTCG 499 46 100.0 30 .............................................. ATAATTTTTTCAAAAGAAACTCAAGAAATT 575 46 100.0 30 .............................................. GCCATCTTTTTTTTATTAAAACCCGCCTAG 651 46 100.0 29 .............................................. TGAATTTAAAAAAGGATACAATTGGGCTT 726 46 100.0 29 .............................................. TTGGAATTTTATCGAATAATAAAGAAATT 801 46 100.0 29 .............................................. AACAAATTCCTTAAATGATGAGTTTCCAA 876 46 100.0 29 .............................................. AGGCAAAATAACTGGGTAAACCAACGAGC 951 46 100.0 30 .............................................. AAATTGCAGAATTACAAGCAGTAATAGACG 1027 46 100.0 30 .............................................. CTGCTGGTATGGCGTTATTTGGCGACCAAT 1103 46 100.0 30 .............................................. TTTTTGCGCTTACCTGTTTCTCATAGCCAT 1179 46 100.0 30 .............................................. CTTATGAGAATACAAAACAATATTCAACAT 1255 46 100.0 30 .............................................. AATTAAAAGAGACCGCATTGGCACCGTGCC 1331 46 100.0 30 .............................................. AAATTGAATTAGAAAACACCGAAAAAACAG 1407 46 100.0 30 .............................................. GTATCGTGTTAAAAGCAGTTGCGATTATTG 1483 46 100.0 29 .............................................. CATCTGTCAATAACTTGTTGAATGCAAAC 1558 46 100.0 30 .............................................. TGCCGTTGTTTCGGGTTGCCGTCCCTTTTT 1634 46 100.0 30 .............................................. ACGATGCTGATAGAGTAGCGAAGCAATACT 1710 46 100.0 30 .............................................. TCAGGTATTCGGACAAGATTATAGCGTTAG 1786 46 100.0 30 .............................................. GCAAACACGAAGGAATACTTTGCAAACTAC 1862 46 100.0 29 .............................................. ATGTTTAGCCAAATAGATGAAGAAGATGG 1937 46 100.0 30 .............................................. TTGAAAAATATTACGATGAAAGATTCCTTG 2013 46 100.0 31 .............................................. TTGCGATTTTCTGCGATGATTTCAGCATCTT 2090 46 100.0 30 .............................................. AAAAAGAAAAGATTTGACATACACGATGGA 2166 46 100.0 30 .............................................. AGTTACTGCTCCAATTTTCATTGACAACAG 2242 46 100.0 30 .............................................. CGCTGTTTTCTGAAAGCCATCTTCTTACCA 2318 46 100.0 30 .............................................. TTATTGGCAAGTATTACATTATGGGTTCAA 2394 46 100.0 30 .............................................. CAATAATCTTTTTTAATATATTCATTTACT 2470 46 100.0 30 .............................................. CACTATCGAATAACTCTTTATGAGAATCGC 2546 46 100.0 29 .............................................. TAGATGATGATAGCGAGCTATGTCCTTGG 2621 46 100.0 30 .............................................. CTACAGCGCGTTGCAAATGTTGGTGGTATA 2697 46 100.0 30 .............................................. ATCAAGGAGATATTATAGATGTGGTTTTAG 2773 46 100.0 30 .............................................. TGGGGCTTATTATGTAACGCCCGAGAAGAC 2849 46 100.0 30 .............................................. TTGCAATTACGCCTCGTAAATAAGGCAATA 2925 46 100.0 30 .............................................. AAAAAAAAGCCTGACACATACGCTTTCACG 3001 46 100.0 29 .............................................. AATACACCTAATAAATTAAGTAACCAAGT 3076 46 100.0 30 .............................................. TGCGAATCTCTTGGGAGCTACCTACAGAAT 3152 46 100.0 30 .............................................. GAGAAAAACTAGCATACGAGATTAGAGATG 3228 46 100.0 30 .............................................. CTAAATCTGTTCGTATATCGTCAAATGATA 3304 46 100.0 30 .............................................. AAGAAGACAAGGCAATGAAAGAAATACTAA 3380 46 100.0 29 .............................................. ATAACAGATGGCGCACCATTAATCTACAC 3455 46 100.0 30 .............................................. TTGATGAGTTCACGCTGTTTTTCATTACAC 3531 46 100.0 30 .............................................. GGGGTTTGAAGTGCCTAACGGTACGCTTAT 3607 46 100.0 30 .............................................. GCAGAACTATTACGGAAAGTACAACACCCC 3683 46 100.0 30 .............................................. TGATGTATCTTGGTAATGGACCATTCCTAT 3759 46 100.0 30 .............................................. AAATTGAAACTTCATGGTTAAACATGATGA 3835 46 100.0 30 .............................................. TGACACCTTCAAAATGCAATGACGCAGGTA 3911 46 100.0 29 .............................................. TAGCCGATAAAGACGATTACACTAACATA 3986 46 100.0 30 .............................................. GGCTCTTGCCAATTTTGTGCTACTCCTGCA 4062 46 100.0 29 .............................................. GTTATGTGTCGTGATGGTTTGATTTTTGG 4137 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 54 46 100.0 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CTTTTTGAATTAGCTCAAATTTTCAGAATAACTTTTTAACTTACACACTTTGTGTTATACTGCCTATTTTAGCTTATAATTACCAACCAAAAAAAGATATATCTTGTTCAGGTAATGG # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGCTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTGTGTACTTCGGCATTTTCTCTGCTGGCACAAAACCGCATATAGATCGAAAATTGAAACATAGAAAAACCATCGTCCAATAATTTCTTTCGAAATTCACTGGCAATTTTACGCTCTTTTCGCGTTTCGGTGGGCAGGTCAAAAAATACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 760-105 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYCI01000002.1 Flavobacterium psychrophilum strain DK095, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 759 46 93.5 30 T....T...G.................................... TAACTTAAAATAAATAAACGCCATGACACA G [755] 682 46 97.8 30 ..........................................T... TCACGATCTAATGACGAAAACAATACAAGT 606 46 100.0 30 .............................................. CCAAAATGGTTGTATGATTCTGAACTAATA 530 46 100.0 30 .............................................. CAGTAGGAAAAAAAACAATTGATGAGTATT 454 46 100.0 30 .............................................. TTCAAATTTACATGCACTTAACAGGTTTCA 378 46 100.0 30 .............................................. AGACCCCTGTAAACGATTGTTTAGATATTA 302 46 100.0 30 .............................................. ACACAGCTGAAGCACTTGACGAAATGATGC 226 46 100.0 30 .............................................. CGTTGTTGGTTTGCGACTCTTGCGGATTTG 150 46 89.1 0 .......................................G..ACTA | ========== ====== ====== ====== ============================================== ============================== ================== 9 46 97.8 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : ATAAAAATGGCATGTTTTGGTGGTTCTTCTAATGTTTTCAAAAAAGCATTAAATGCTGCAGATGATAACATGTGAACCTCATCGATAATATAAACTTTATATTGTCCCGTTTGTGGGGGGATACGAACTTGATCGATTAGATTACGAATATCATCGACCGAATTGTTTGAAGCCGCATCGAGTTCGAAAACATTGAAAGCAAAATCTTCGTTCGGGTCGTCGTAACCTGGTTGGTTTATTTTTCTGGCTAAAATTCTGGCACAAGTTGTTTTTCCTACGCCACGAGGACCAGTAAATAATAGGGCTGATGCCAAATGATTTGTTTCTATCGCATTTAGTAACGTATTGGTAATGGCTTGCTGCCCCACCACGTCTTTAAACGTTTGCGGACGATATTTACGAGCCGATACTACAAATTGTTCCATAAAAAAATATTCGAAAGCAAATATAATGGTAATAAGTGAAAATGCAAAAGTGAAAAGTGAAAAGTTTTAAAATGT # Right flank : ATCCCGCAAAGTGTGTAAGTTAAAAAGTTAGGCTTGAATTTTATAATCTGAGCCTTTTGTCAAATATAAGATTAAATTGATTTAAAACAATACCCCAATTTTGTA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-5] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //