Array 1 140147-140567 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NQOJ01000003.1 Gardnerella vaginalis strain NR039 scaffold5, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	====================================	=============================	==================
    140147	    36	 100.0	    28	....................................	TAATGGTGACATTAAGCTTAAGTCTCTT 	
    140211	    36	 100.0	    28	....................................	GCTGAAGCTAAACAGTCGCGGCATGTAT 	
    140275	    36	 100.0	    28	....................................	TATATATTGGACGGGCGGCACAGGCGTA 	
    140339	    36	 100.0	    28	....................................	TAGCGTGTGTGGTGGTTTTGATGGTTCT 	
    140403	    36	 100.0	    28	....................................	CCAGCCAGGCAACGGCTCAAAACTAGAT 	
    140467	    36	 100.0	    29	....................................	ATTGCGATAGGCTTCTGGCACTAACGTAG	
    140532	    36	 100.0	     0	....................................	|                            	
==========	======	======	======	====================================	=============================	==================
         7	    36	 100.0	    28	CAATTATATCAAGAATGGTAGAAGCTAATTTTCAAC	                             	       

# Left flank :   NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCACAATTTGTAAGGAGTGAATTATGAAAGTCGATGAGGACAGTGGTGGCATGTGGTGTTTAGTAATGTTTGATTTACCAGTGAAAACAAAAGTAGAGCGTCACGCTGCAACTGTATTTCGCAATATGCTGCTTGATATGGGGTATGCAATGGTACAATTTTCTGTGTATGTCCGTTATAGCCCCACTCAAACAGGAAATAGAACTTCAGTAAAAATAATTAAGGATAATCTTCCTCCACGTGGATCAATACGCATTTTACATGTCAGTGATCATCAATGGTCATCTGCACAACGTTATTACAATGCCAGGCAAGAAAAGAAAGAGGAGGCTCCCGATATTGCTATGCTTTTTTAATCATAAAATGTCTTATAATGGTTGGAATTCTACCATTCTTGATGATATAC
# Right flank :  CAAATAAATAAAAACGGGGAAGCTAGAAAGCTTCCCCTGCAGTGATAATCATCAAAACTGCTGAGCAATCAAACTGGATAACAAGTCCAGTCTTATTGAAAATTAGCACTTCAAATATATCATTTTTAAGAAACAAAAGACAAGTGAATTTTTTTAAGTTTTGTTAAAAGATTTGAAAAGTTAACATATCGATATATTCAATGAATGACACAGTTGGAGATATTACTATTATTATGTTTAACATATATGCGTTTTTTAAAAAGTGCATTCTTAGAATGTATGTATGTACATAGATAGCATCCATATATTCATAATGGGAACGTTACTAATGCAGCGTTCCCATTATGTTTTTTATAATATGCGACTTTATATGCGATTTACCAAATGTGTACGCGCTCGCTTGGAGCAAGCCACATCTCGTCGCCGTCTTTAACGTCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAATTATATCAAGAATGGTAGAAGCTAATTTTCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.30,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [73.3-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.64,0   Confidence: HIGH] 

# Array family : NA
//