Array 1 12202-12958 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYX01000006.1 Geobacillus sp. B4113_201601 NODE_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 12202 30 100.0 35 .............................. TCCTATGGTTCTTGCGGTTTCCCGCAAGGTCAGAC 12267 30 100.0 36 .............................. TGCGCTAGAATTGGGTTTGCAGTGGGTGTCGCGTGG 12333 30 100.0 35 .............................. TGCACGGTCCCTCGCTTCCGCAAGTCGGCGACAAG 12398 30 100.0 35 .............................. GGGTGCGGCCTGTGTGCCCCGCACGCCGGCAACGC 12463 30 100.0 36 .............................. TCCCGTTTGCATCCGTGATTTTGACTCCTAATCGTT 12529 30 100.0 37 .............................. TTGATTGTGCGGAGTGTCGTTCCGTCAACTTTTTCTG 12596 30 100.0 37 .............................. TATTGTCATTGGGCTGGTTTTTCTGTGTTGCAACGCC 12663 30 100.0 36 .............................. TTCGGAGGATTGTCATAACTATGTTGTGCTACATAC 12729 30 100.0 37 .............................. ACAAAGGCATTGACCATTTTCGCTCCCGCATCACCGA 12796 30 100.0 38 .............................. TCCGACAAGATGATAGCTCCGCATGGTCTGGGAAACGC 12864 30 100.0 35 .............................. TAGGAACCGCCATGCAAGGTTTTGGAGCATTGGCA 12929 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 12 30 100.0 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CACCCCATCGGTTCACTTGCCTCCGGAGCGGCTCGCCAAACTCGCCTCCGTAGCGTCAACGCCGCTGCAGCCAGTGAAAGAAGCGATAGCGAAAACCGAAAAAGCGGGATACCAAGAGGCGATCATCAGCCGACTGCTTGGAGACATAAAAAGTTAGCACTCGCCCCCGTTCGTGCAAGTGTTGGGATTCCAATGTTTGTATTCGTCTTGCCCGCGATGGATGAGCAGGCGGCGCCCGGGTCTTATTCACCGCATGACGAGCGTTTACCCTCGCTTAGGCAAATAGCAATCGGCAAACAAGGCAAGTCAAACGCTAGGAAGCAGTCTTCATTTGTCGTCGACCTCCAATCGCGCAAAAACCCCAGGGGGTCGACGACATTGATTTTGATCGCTTGATCCCTACAACCATCAAGGAGAGATTTCATTGACAGAATCTTCGAAACGTGTTATTCTGATGATGACATTGAAGGGAAAAGGTTGATATGACAACACTTTTTGGG # Right flank : CTGGAGTAGTGGCGACTATATGTGGTTAGGACCGATTTACGTGAGGGCGAAAATATATGGATTTGATGGTGCGCCGCCATCTCCAGTAGGTGGTAGTGGAGGTTATATTATAGTGAATATTGAGCAAAAGGTTCCTACAAGTTTAAGAAAATTGATGCAAGCGTTTAAAGTATCCCTAAAAACGGATGAGAATCCTGTGAATGGTGTCGATTTCGAAGGTTTCTGGGGTTACTACAGTATTATATCTGAACATGCATTTAGTACAAGCATAGTACAGTAGTTTTCAAAAATACAACTACTAATAGAAGGGTATAAGAGGAACACATAATCGACTGGGGGAATATAAATGGAGAGTAGAAAGAGAAGTTGGTTAGTAAAAAAGGGAGGTAATTATAGTGGAAGAGAGAAAAGAGAGGACATGGAAAGGAGCCGTAAAGTATTTAAAAGTAGCGGCTGCTAGTACGTTGATGGCGTCGATTGGGTCTGCTTATACGTTTGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.37,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 5794-7677 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYX01000093.1 Geobacillus sp. B4113_201601 NODE_271, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 5794 30 100.0 37 .............................. TCGAGGGAATGAAATCGATGAATGGTCCGTTGCAAGA 5861 30 100.0 37 .............................. TAAATGCCCGCCGCCGCGAATACACTGCCACCGTAGC 5928 30 100.0 35 .............................. AATTGGTCTTTGTCTCGCCTGTCGGCTCTCCTGTC 5993 30 100.0 36 .............................. CTTGTTGCGGCGGACGTTTGCCAGCTCTCAAATCAG 6059 30 100.0 36 .............................. CTTTGCAACTCATACTTACGCAATGGTTCATAAACA 6125 30 100.0 36 .............................. GTTTTTCTTTCGCAATAGTTTCTGGAGAGTCGCCAT 6191 30 100.0 36 .............................. AAATGGAGAACTTCGTCGTTTCGGAAAACGTACATT 6257 30 100.0 36 .............................. TCAAGTCGATCTTTTTAGACAAGTCCACGCCGATAT 6323 30 100.0 37 .............................. CAGTGCGTCGCCAAAGAGTTGTTCCTCCTCGCTCTTT 6390 30 100.0 35 .............................. TAAATATCTTGAAGGGATGCTATCCCTCCTAATTC 6455 30 100.0 40 .............................. ATGAGTCAGAAGTGATCGCCAACTGCCAGGCGTCGGTTGG 6525 30 100.0 35 .............................. GCTCCCCACGGTTGTTTTCCGTGGGGCTGAAATTC 6590 30 100.0 35 .............................. CCTTTCATTTTGATCTTGTCATGATCACGAAACTC 6655 30 100.0 36 .............................. ACACAACTTTCATTTTCTTTCCCTCCATTCTTTTTT 6721 30 100.0 36 .............................. TAGATTTTCTGAACCACTTACCCATTCTAAATTAGA 6787 30 100.0 35 .............................. CGATTGGTACGTTTCACAAGGCGTGCCACTTTCAG 6852 30 100.0 36 .............................. CGCCGCGCGACAGGCCCTAACTGTCCCGGCATAGAT 6918 30 100.0 39 .............................. AAAGCTCAGACAACTTACCTGAATTAGACTGCTCAATTT 6987 30 100.0 36 .............................. TCCGGTTCGGCCGGAAAATTCGCTGGGTTCTCACCA 7053 30 100.0 35 .............................. TAATGAACATCGCCGATATTTGCTGATTTAATCTT 7118 30 100.0 37 .............................. AGCGAATGGAAAGCGAAGGAGGTTCAATAATGGCAGG 7185 30 100.0 35 .............................. CTCAGATGTTTATTAGACAGCCCTCCCGCCCCACA 7250 30 100.0 36 .............................. TCGAAACATTCAACAACCTAAACGACATCAATCTCA 7316 30 100.0 37 .............................. GTGATCCACCGGGAACAATGGTGCGCGTATGAATATT 7383 30 100.0 36 .............................. ACACATACGCCTTGGCCACTGTTTTCTTCTCCATGC 7449 30 100.0 38 .............................. GTCCGTATTCGGTTACTTCTTGCAATTTTTTTCTCCAA 7517 30 96.7 35 ................C............. TTGGAAAATTCATGCGTTTGCACGCGCAAGGCATC 7582 30 90.0 35 A................T.....A...... AATTCCTCCATGATCGTTGATCATCTTTTTCTACG A [7603] 7648 30 76.7 0 .GA.....T...T.G.........G....T | ========== ====== ====== ====== ============================== ======================================== ================== 29 30 98.7 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : CTTTCCGATGATATCGTCCGCGTCGCCCGTTCACCGATCCGCAAGCTCGGGCCGAACGACCGGCTCATCGCTCCGGCTGTGCAATATTACACTTTATTCGACAGCGTCCCGTCCGGGCTTGTCAAAGGCATCGCCGCGCTCTTGCGGTTTGATGAGCCTAGCGATGCCGAAGCTGCTGCTCTCCAGCAAACGATTGAACAAAGCGGTGTCGAAGGCGCGCTTCGGCAATACGCGGGACTGGAGCATGACCATCCGCTCGTCGTGGCGGTGAAGGAAGAATATGCTCAAATGAAACAAATGGATTTGCGTTAAACTCGGAGATCTCTTATATTCTGTCGTCGACCTCCAATCGTGCAAAAACCCCCGGGGGTCGACGACAACCGTTGAAAGCGCCCCACCTTCCAGCTACCGAAGGAAAAAGAAATTGACACAATTTTTGAAACATGATATTCTGAAAACAGCTGCCAACGGAAACACCTGATTTCACGGGCTTTGTTTGG # Right flank : TAAAGAAAACGTGGAGTGGGCGACTGGTTTTTCAAAGAGCTGCTGTCCACATTTTTCGAAGAGGTTTTGCGCCTGCTCATCCGTCTTGAGCTCGATGTTGATAAAAAACAACAGATTCGCTCGATTGGTGAGAAATTACAAGAAACAAAATAATGACGTTGCAAGGTTTTGCAGTTTGAGAAACAATGTTGGAGAGCAGCATTTCCTGTTAAATTACCTGCCTCTAGGAGGCCGGAGATTTAAGGGTGTATACGGATTTGCAGTGTCATTTCTCAATTAGAAAAACCTTGTTGGATCGGGCCTGTTTTTCAATCATTCTCCCATTGATGAAGGGGATCAGCGGTTTTTCACCGGCCTCCTAGAAGATCGTGATTTCGTACAAAATCTTGCTATTTCATCTGTTTTTCAATTAGAGAAGCTTTGCGAAATCAGCTTTTTTGGGTGAAATGCCGCTGATTTGCTCGTGGCAGTCGCTTTGGGGTGCCCCAAGGCGACCGGGA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 2776-2941 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYX01000097.1 Geobacillus sp. B4113_201601 NODE_285, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2776 30 96.7 39 ......................G....... AATTTGAATCCGGCTCCTATAACGCAACTACCAATATCG 2845 30 100.0 36 .............................. ATCAAAAAGTAGTGTCTTTTTGTTCTCTATGTAATA 2911 30 83.3 0 ...................C.A...TCT.. | C [2939] ========== ====== ====== ====== ============================== ======================================= ================== 3 30 93.3 38 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GCTACATATTCTGATTCTGCTTATCCTTGGAAAAAATCAGTAGATGGACGTAATCATTTGAGGTATTTTGGTATTTCAACAGATGGTAGTTCTGCTGTTCCTGATTTTTTATATCCTGATGATTATGCGACAACAGGCGACCTTTTGGGTAGAGATTATTTAGAGGAACCTTGGACAACCAGAAGTGAAATAAGAAATATTAATAAACCTGGTCTATATTATTTTAATAATCCGGATACTATACAAGTTTTGTACATGTTAAAAGGAGAAGATATTTCTCTTAATGAAGCTCTTCAAGAAATATATACTTGGCTAGATGGAGTAGTAGATAAATATAAGTCAGATCACGCTTTTTGGAGAAAGTTTAGTTCTAATTTTGACAGAACGGATACACGGGATGAATTTAAGTTAATGACTCCAGAAAGAAAAAGGCAAATTCTTTATATAGCGACGCCTCCAACTACGTATACGTATGGGGTAGCTGTAGAGTGGCATAAATG # Right flank : CTGTGAGCAGGATGTTGCCTTGGGGACGGCGAATAGAAAAAGAGAGACCGTCAAGTTGAGGTGATTGAATGGCGATTGACCATGATCGGTTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTTCTGCTCCTCTTTTTCCCCGATATGCACGAGCATATCGATTTCCACCATCTGTCCTTTTTATCCGAAGAGCTGTTTACCGATGTGACGGCCGGTGAAAAGTACCGCGTTGATTTGCTGGTCGNNNNNNNNNNTTCCGGTGGCGTTGCGGAAGAAGCAGTGGCGGGAGTACATTCGGCAGGACAATCCGGTTGCGGCTGCGTTGCTCAGTCAAATGGGGTATACTGAAAGAGAGAAGGTGGAGCTGAAAAAAGAGTTTTTGCGCATGTTGGTGCGGTTGGAGCTCGATGAGGCGAGGCAGCGGCTGCTGCTTGGGTTTTTTGAGACGTACGTGAAGTTGACGGAGGAAGAGGAACAACAGCTGCAAAGTGAGGT # Questionable array : NO Score: 6.83 # Score Detail : 1:0, 2:3, 3:3, 4:0.66, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 23525-24285 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYX01000092.1 Geobacillus sp. B4113_201601 NODE_269, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23525 36 100.0 30 .................................... GAAAAGCATGTATAAACTGTATGTTGACGA 23591 36 100.0 30 .................................... CTAGATTTAGAACATCGTGAACTCGCTGGC 23657 36 100.0 30 .................................... TCGCGCACCGTTTGGGTGATCTTGATTATG 23723 36 100.0 30 .................................... GACAGTTATGTTAAAAAACATCATGACGTA 23789 36 100.0 29 .................................... CGATAAAGGATTGCTACTCCGGGAATACG 23854 36 100.0 29 .................................... CGCGATCGACTTGCGACCATTTGTCTTTT 23919 36 100.0 30 .................................... TTGATATTGATCGGCCAATCTCTCGGATTA 23985 36 100.0 30 .................................... GCTTATTTAAGTTTATTATTTCCATTCCGA 24051 36 100.0 30 .................................... ATTTACTACGGTTCCCCGAAGCGTCCGAAT 24117 36 100.0 30 .................................... CCTTACCACTTCCGCGATTACGTCACAGGC 24183 36 100.0 30 .................................... GTCAGTACCAATATGAAAACGGAAAATCCG 24249 36 83.3 0 .........................CCG.G.TC... | C [24276] ========== ====== ====== ====== ==================================== ============================== ================== 12 36 98.6 30 ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Left flank : AAAGCTTCGTCACCGCAAGCCGAAGCCAAAACCCTTCGTTGTTGAAATTGCCGGAACTTCTCCCATTACAACTGCACGTGTATGAGTAAGTTTATGCGGCTGCTCGTCTTTTTTGATCTTCCCGTCGTGACCAACCGGGAGAAACGTGAATACCGGCGATTTCGCACATTCCTGCTCAACGAAGGGTATGATATGCTACAGTTTTCGGTTTACAGCCGTGTCTGCCATGGACATGAGGCGACGGATAAACACTTGGCAAGATTAAAACGCAACTTACCCCCTCGAGGATCGATTCGGGCAATGATCGTAACGGAAAAGCAGTACACAAAAATGCAACTGCTTCTCGGGGAACCAACAGCCCAAGAAAAGAAAATAACATCCACACAGCTGACACTTTTTTAAAAAACGGAAATGGTTCCCCCTATTGCATAGACACATTCGTATTTTTTAAAAGCAAAAAAGCCCGCGATCCTTGAGATTGCAGGCTTTTTTGGATACGT # Right flank : CAGTTTTGAGGCCATTTTAGGCAAATGAAAATGGCCAAAATGCTTTGATATCAAGGAGTTTACGATGTGGCCCCTAGAAAAAAACGCCGAATTCCATAGGCACACGACTTGCCTATTTTAACTTTTAAAAGAGCTGAATATCGGTTATAATATAGACATGTACATACGACAAGTTACACGCAAAAAGAAAGATGGAATCACCGTAGCTTAACTCCATCATGAATCGTGGCCGAACGTAAGAGACGAATGCGAACGTCTCATGCTTGGACATTTTTCTTCAAAAAACGGCGACCTTGGTCAACGACCGAACGGACGGCCAAACAAGTGCAACTCTTTGCGGCTCTAGGGCTGGAGCCTCCTCCGAAGATTCTAGGCATCCATCCTTGCACCTAGATACACGCCCAACGTATGCCCCAATGCCTCTCGTCCATTTGGTATCAAGGGATGAGAGGCATTTTGTTTGCCTAGTCACTGTCGAACTCGGGTCAGGGGAACTATGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATACCACAGCGATAATCTCAGGGGAACTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 27896-26120 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYX01000092.1 Geobacillus sp. B4113_201601 NODE_269, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================================== ================== 27895 30 100.0 36 .............................. TACCACCCGATGAATGCTGTCTGATGTTTTAAAACC 27829 30 100.0 36 .............................. AATGCAAGTCAACCTTGGTACTGGTGGTTAAGAACC 27763 30 100.0 38 .............................. CTTCATGCGTCTTTCTTGTTCCACCATTTGTTGCGCGT 27695 30 100.0 38 .............................. TTCCTTTTTTCCGTTTCTTTTCGTCCTCGCCCGGCCTC 27627 30 100.0 38 .............................. ATAAATCGCGCTGGCCTGTTTGCGATTGGTGGGAGCGC 27559 30 100.0 35 .............................. TCGTATGGGTCATATCGCGGTCTACGGAGGTGGTC 27494 30 100.0 37 .............................. CTCGGCCTTCAATCCCTAAATCATTTCCGACGGATAG 27427 30 100.0 41 .............................. CCCGGTCTCATTTGTTTCCCCTCCAAATAAAATAAGCACCC 27356 30 100.0 36 .............................. AACAGAAGGACGAGCGCCTGACGCGCCGCACAAGGA 27290 30 100.0 35 .............................. TACATCTACTATCAATTGAAACGCGACTCTATTAC 27225 30 100.0 37 .............................. TATACCGCATACTTCAACCGTGCTTTCCAATCCTTAG 27158 30 100.0 40 .............................. AAAGAAGAGCCAGAATTTGCAACCAAATGTGCTATTTACG 27088 30 100.0 37 .............................. AATTTACGCTAAAAAACCCAATTGAAACATCAATCGC 27021 30 100.0 36 .............................. TACATTTTTGCGTACAATTTCATTTTGTCTTCTTTA 26955 30 100.0 36 .............................. AAGCAAGAGAAAGTGTAAAAATAGCATTATTACGCC 26889 30 100.0 35 .............................. GACCAGTGTTAATGCGTTGTCCGTCAGGAATTTTC 26824 30 100.0 36 .............................. TCCTCTACGTCGTTCGAGGGTTCGTTGAATTTCATC 26758 30 100.0 37 .............................. CTAAAAAACTGTTTAATCCCCTCTAATGTCTGATTGA 26691 30 100.0 38 .............................. AAAATAAAAACGCTCATTTTCTGAGCGCTTTTTTCAAC 26623 30 100.0 35 .............................. CCGTGCAACTCACGAGCATCAACAATCTTTTCGCC 26558 30 100.0 36 .............................. CAACAATTGGTTGGACTGATAGACCGCGGCAGGTGC 26492 30 100.0 35 .............................. TCTCCACCTGCAAACGACGCTTCCTTCTGTAATCG 26427 30 100.0 35 .............................. TTCGTTTAGCTGACTACGGAAATCAAAATGCAGGC 26362 30 100.0 37 .............................. TCACCAAAGGCATTAAGAGTGAATAGCGGCCTAACAC 26295 30 100.0 35 .............................. TACTGTTTTATGTTTCGTTTCGTCCTCGCCCGGCC 26230 30 86.7 51 .....................T..C.T.C. TATGAGGGATTGAAACCTGTACCAGATGCACCGAAAATCAAAACAAAGTCT 26149 30 76.7 0 ...................C.A...TCTCA | ========== ====== ====== ====== ============================== =================================================== ================== 27 30 98.6 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : GTATGAAACGATCGATGGCAAAAAGAAAACGCATTTTTTCGGACCGGATGACGACGTCTTTCCCCACCTCGTGGAGCTGAATTTCCGCCATAAATACGAAGCGTACTATGGCGTCGAGCCAGAAGAGCGATTGATGATCGAGCCTGTCCATGTCCATCACCGTCATCGAGTGGTGACAAGATTCAAAGATATGTATATTACGGGCTGGTTAGGCCATTATCGTCTTTCCTCTTCTCCCGAACAACTGACGTTTCTATACCACGTTGGCCTAGGCAGCCGCAATTCTCAAGGATTCGGCATGTTTCGGTTAATCAGCGAGTGAGCCATTCTAATTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCTTGATCCCTACAGCCATCATGGTTGAACTTGATTGACAGAATCTTCGAAACGTGATATTCTGATGATGACGCTGAAGGGAAAAGGTTGATATGACAACACTTTTTGG # Right flank : CTGTGAGCAGGATGCCGCCTTGAGGACGGCGAATAGAAAAAGAGAGACCATCAAGGTGAGGTGATGGAATGGCGATTGACCATGATCGGCTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTCCTGCTCCTCTTTTTCCCCGACATGCACGAGCATATCGATTTCCATCATCTGTCCTTTTTATCCGAAGAGCTGTTTACCGATGTGACGGCCGGTGAAAAGTACCGCGTTGATTTGCTGGTCGAGACGAAGCTGAAAGGCGAAGACGGGCTGATCATCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCGTCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAACCTACCGGACCCGCATCGTTCCGATCGCCGTCTTCCACTATGATTCCCTCCGCGAGGAACCGTCTGTGTTTTCGATGGAATTTCCGTTTGGGGAAGTGCTGCAGTTTCGCTTTTTTTCGGTGGCGTTGCGGAAGAAG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 7356-9365 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYX01000100.1 Geobacillus sp. B4113_201601 NODE_297, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 7356 30 100.0 37 .............................. GAGTTTGATGTACAAATCAAAGACAAGTACGGAAGAT 7423 30 100.0 36 .............................. TAAAAAACCCGATACCAATATCGTCTTTCACCAGCA 7489 30 100.0 39 .............................. ATTTTCCGCTGCCGCTTTCCCCAGCAATCAGCAAATGCG 7558 30 100.0 34 .............................. AAACTCGACCCTTCTAACACAACCTTGCTGGCGC 7622 30 100.0 34 .............................. TTCCTCCTCAAAACAAAAAAGACGGGATTTCCCG 7686 30 100.0 36 .............................. CACGACATAGACAACCCCGTCTTGTGCGTCCGGCAA 7752 30 100.0 36 .............................. ATCAGTTTCATTGCCGATCCCCCTGCCTACTTTTCT 7818 30 100.0 38 .............................. CCTTTTTCATAAATAGAATCCATTAAAGTTTTATCTGT 7886 30 100.0 36 .............................. GACGCTCACGCGGCTGGATTTGAAGAAGTTCAACAA 7952 30 100.0 37 .............................. AACAGATTCAACAAGCGGGCGGCAAAGTGAAAAAAGG 8019 30 100.0 35 .............................. CTGTTACATATTGCACATTACTTCCTACAGATTGC 8084 30 100.0 35 .............................. TTGGAAAACGGGACATTTCTTACGGTGGAACCGGA 8149 30 100.0 35 .............................. CCAACATCGCATCGAACATTGGCGCTTTTCCTGTC 8214 30 100.0 34 .............................. ATAACCAAACATCACCTTTTCCTAATTTAAGACC 8278 30 100.0 37 .............................. TGCCTCGATTGCGCGGCCGCATTGGACGCGGAAAAGG 8345 30 100.0 36 .............................. CTGCACCATGATATTGAGCCTGTAATAGAAAATGAA 8411 30 100.0 38 .............................. TCCCAAGCTCTTTTAAGTCTTTAGCAGTCTGTAAAAAT 8479 30 100.0 36 .............................. TTGTCCTTCCCTGCCTTTATATCCCTCTCATACTCA 8545 30 100.0 35 .............................. CGCGCTTTTGTCACCATTTTGGTGACTACGGGGTA 8610 30 100.0 35 .............................. GCGGAAGAGTTGTGGGAAGAATATGTCGGATGGGG 8675 30 100.0 37 .............................. TCGTCATCAACAGTACAGCAGAGTGGACAAGCTCGGA 8742 30 100.0 35 .............................. ATTGCATACATTTTTCTAGTTTGTCTATATGCTCT 8807 30 100.0 38 .............................. ATTCCGAAGAGAACATCGGTTTCTCTTGACACTTATGA 8875 30 100.0 36 .............................. TCTCGCATGTTTGGTCAAAACCCGCGGCCGGCCGAG 8941 30 100.0 38 .............................. AGTACTGTCAATATTATTTTTGGCATAGTGTGACTATC 9009 30 100.0 36 .............................. CCCTACTATCATCAGAGCCAAAACGTACAGTTTTAC 9075 30 100.0 35 .............................. TCCCAGCGATAAGGTCAGCTTGTAAGCGGGCTTTT 9140 30 100.0 35 .............................. ATAAAACGACGGGTGCAACAGTTGATGCGGGTTCG 9205 30 100.0 35 .............................. TAAATAATAGCCATTTTATATCTCCTTTCTTTTTT 9270 30 100.0 36 .............................. ACTTCCAGTATGTCCCCGCAACAAACCGAAGACTTT 9336 30 83.3 0 ...................A.A..G..G.T | ========== ====== ====== ====== ============================== ======================================= ================== 31 30 99.5 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TGAACACTGCTACAAGTCTTGATGTCTGCGATCACTATTCAACGCATGTGGAGTGCGTGGCGAAATTGCAATGGCGGATGTAAACGCCAAACAACTGATCTCGATTGAACGTCATTGTCCAAAAGAAGTGTCCGCCTCAAGAAATGGACAGTCTGACCGCCCGCTGAGCAGGCGAGCGAGGAAGGCCGTTAGCCATCATCAACGAATTGGGTCAGTGGTGGTGAGAATGAATACTTCGGAACAAAGGGAAGCAAAAAAAGCGGATGATGCACGCGCCCTAATCGCTTGAAGCCTCTTCTCCAAGCGAAGCGCAAATGGCCGATCCATTCGCTTGTCGTCGACCTCCAATTGTGTAAAAACCTCAGGGGGTCGACGACATTGATTTTGATCGCTTGTTCCCTACAGCCATGACAAATGAACTGGATTGACAGAATCTTCGAAACGTGTTATTCTGAGGATGGCGTTTAAGGAAAAGCTTGATATGACAACAATTTTTGGGG # Right flank : TAACAGTTGTCCATAGCACGCCCCTGTGTTGCTTCGACTGATCTCCCCCATTCAACCGCTTATGTTTTAATGGAAGATGAGAAAAGTAGCAACCTTTCTCACCTATAAGTTGCGATATAAGAGGCATTTTTCCTCTTGAGAAGGGGAGGGGCTGCCCCAACCGCCCTCCCTCTCAAGAGGCCACGGTACGAAGTGAGATAGTAGGCTTTTCAATTTTTGTTGACAGTTTTCATTCATCAAAATTCCCAACGGCGCTATATGCCAAGTGCAGTTGGGGGCGTGCGAGAAAGTGAGAAACCTAAAAGGCCGGTGGCAAACCGCTGTGTCGCACACCAATGAGCGGCATCTTCATTTAAAAAAAGAAAGATGATTCTGCAAAGTTTCTCTAATTGAGAAGTAGGTTGGAACAGCAGCGTTTTACCCTAAATCACCAGCGTCTTAAACCTCATGCTTCTAGTTTTTTCGTTTCTTCGTTATAGACATGGACATTCAATTCTTTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //