Array 1 55721-55930 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMAQ01000009.1 Gilliamella bombicola strain R-53248, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 55721 28 100.0 32 ............................ GCTGAGTCAGAAAAAACTTGGATAGCGCCCAA 55781 28 100.0 32 ............................ GTTGAAAATAGTAATCCCTGTTGATATCGCAC 55841 28 100.0 32 ............................ TCCGGCGGGGTGGTTTGAGTGCAACGGCGCTC 55901 27 92.9 0 ..................-A........ | ATT [55925] ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 CCTTAACGCCGTGTAGGCGGTTTAGAAA # Left flank : ATGTGGCCTGCGGCTGCCCGACGCCGCCGCTCGGTCTTAACGCACCGTTTGTGGACGCGCTCCCGGCGCACCACAAACTCGCCAAACGTCCTGTTTGGCGTGCTAACCTCACTCTGTTGTCGGCACATTCTGACGCCGGAACAAGACAGACAACATAATCTTAGGTGTTTTTTGGTGAGTTATTTTTGTGTTAAAAAGCAATGTAATTACATCCAAAAAGTGGTCAGGAAATTTATTGATTTTATTGAAGTTTTTGTTTTGCCGTTTTCAAGCTAAATCAATCAATTAAACAACCTAAGCAAAGCGCCGACTACAACAAATCAACAAAACCACAAATAGCGCCCTAATAACAGCAAATTAACCGCTCCAAACCCTTTTTTTAACGACAATTTAAAATTAAATAAAATCAATAAATTATAAAACACCTCAAAAAAAGGGTTTTCAAAACCAAAATTGTTGTTTATCTTTATACAGCAAGATTTATCAAATCTTGAGTTCTA # Right flank : ATAAATTATATAATTATAAAAAACAATATCTTCCAAAAAAGATGGTTATGTTGTTTGTCCTATTCCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCCAAACAGGGATGTTTGGCGAGTTTGTGGTGCGCCGGGAGCGCGTCCACAAACGGTGCGTCAAGACCGAGCGTCGGCGTCGGGCAGCCGCAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTCGCTTTAATTCCCTGACTCGGACGTGGTCACTGTAGCTATTTTATCCACCCAAGGTCAAAACGTCCGAAACCACCGCACCCAATCCATCCTATTCACCAACCCAAAAAGGCCTGATTTTCCGCCCAAAAATCAGTCAGAAAACATATTGATTTTATTAAAGTTTTTATTTTGTGTTTTTACATAAAAACCTACATAAAAAAACAGCAGCCAAATAGCTGCTGTTTTTTTATTGCATTTGTTTTTTTCGATTATTTAATCGCTTT # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTGTAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 373790-373521 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMAQ01000002.1 Gilliamella bombicola strain R-53248, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 373789 28 100.0 32 ............................ CCAACAAAATTTGTAATATATCTATTCACTAT 373729 28 100.0 32 ............................ TGATAACCGATACAAAAACCTATCTCTGATCA 373669 28 100.0 32 ............................ GGTACTCAGTCACAAGCGCCACTTAAGGGCTT 373609 28 100.0 32 ............................ TAAATTTATTATTTTGCACTAAAATTTTTTGA 373549 27 85.7 0 ............GC.....-....A... | TT [373524] ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.1 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : ACAACATAATCTTAGGTGTTTTTTGGTGAGTTGCTTTTGTGTTAAAAAGCAATGTAATTACATCCAAAAAGTGGTCAGGAAAGGTATTGATTTTATTGAGGTTTTTATTTTGCTATTTTTAAGCTAAATCAATCACTTAAACAACCTAAGCAAAGCGCTGACACACAACAAATCAACAAAACCACAAATAGCGCCCTAATAACAGCAAATTAACCGCTCCAAACCCTTTTTTTAACGAAAATTTAAAATTAAATAAAATCAACAAATTATAAAACACCTCAAAAAAAGGGTTTTCAAAGATGAAATTGTTGTTTATCTTTATACAACAAGATTTATCAAATCTTGAGTTCT # Right flank : ATAAAATAAATCATATAATTATAAAAACATAATATCTTCCAAAAAAGATGGTTATGTTGTTTGTCTTGTTCCGGCGTCAGAATGTGCCGACAACAGATCGAGGTTAGCACGCCAAACAGGGATGTTTGGCGAGTTTGTGCTTCGTCGGGAGCGCATCATAGCCGGTGCGTTAAGACCGAGCGCCGGCGTCGGGTAGCCGTAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTTAGGGAATTCGCTTTAATTCCCTAACTCGGACGTGGTCACTGTGGCTATTTTGTTTACCAAAGGTCAAAACGTCCGAAACCACCGTACCTAATTCATTCTATCCACCAACCCAAAAAGGCCTGATTTTCCGCTCAAAAATCGGTCAGAAAAGGTATTGATTTTATTAAAGTTTTTATTTGGTGGTTTTTAGCCAAAACCACCACCCAAACCCTTCCCAAAAACACACCAACATAAGCTGACTTAAGCCTTAACAAAACCTTAAAATTT # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 2214-2482 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMAQ01000014.1 Gilliamella bombicola strain R-53248, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2214 28 100.0 32 ............................ TAGTAGCCGCCAACGATTGATTGGTTTAGCGA 2274 28 100.0 32 ............................ AGGGGATTGTCAATCATTTTGTCACAGTGAAC 2334 28 100.0 32 ............................ ATTACGTCATCAGTGTATGTAACTAGATTAAT 2394 28 100.0 32 ............................ ATATAATTCTTGCGTAACTTTGTAACGTCGCC 2454 27 89.3 0 ............G.....-.....C... | AT [2478] ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.9 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTCCCGGCGAAGCATAGCCTCGCCAAACATCCTTGTTTGGCGTGCTAACCTCACTCTGTTGTCGGCACATTCTGACGCCGAAATAGGACAAATAACATAATCTTAGGTATTTTGGGTAAATTGTTTTTTTGTTAAAAAGCAATGCAATTACATCCAAAAAGTGGTCAGAAAAGATATTGATTTTATTGAAGTTTTTGTTTTGCCGTTTTCAAGCTAAATCAATCACTTAAACAACCTAAGCAAAGCGCCGACATACAACAAATCAACAAAACCACAAATAGCGCCCTAATAAAAACAATTTAACCGCTCAAACCCTTTTTTTAACAACAATTTAAAATTAAATAAAATCAATAAATTATAAAACACCTTAAAAAAAGGGTTTTCAAAACCAAAATTGTTGTTTATCTTTATACAGCAAGATTTATCAAATCTTGAGTTCTA # Right flank : AATAAAATCAACGATATAATTATAAAAACACAACAATCTTTCCCAAAAACGATGGTTATGTTGTTTGTCCTATTCCGGCATCAGAATGTGCCGACAACAGAGAGAGGTTAGCACGCCAAACAGGGATGTTTGGCGAGTTTGTGCTGCGTCTGGAACGCATCACAAACGGTGCGTCAAGACCGAGCGACGGCGGAGGGTAGCCGCAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTCGCTTTAATTCCCTGACTCGGACGTGGTCACTGTAGCTATTTTATTCACCCAAGGTCAAAACGTCCGAAACCTGCGCACCCAATTTATTCTATTCACCAACCCAAAAAAGGCCTGATTTTCCGCCCAAAAATCAGTCAGAAAAGGTATTGATTTTATTAAAGTTTTTTTTGAGTGTTTTTTCTAAAAAAAACAATCTCCCCCCCACATTACAATTGGTTTTCATTTTGCATCTTGCCCTAATTATCGGTATAGTG # Questionable array : NO Score: 2.96 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 1-148 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMAQ01000010.1 Gilliamella bombicola strain R-53248, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1 28 100.0 32 ............................ ATAGTGTCATCAGTGTATGTAACTAGATTAAT 61 28 100.0 32 ............................ AAATCGACGAGTAATTACTCGTGAAGCCGGGT 121 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 3 28 100.0 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : | # Right flank : ATTTCCAGTTAAAACGCTCTAACAGAGACCACGCCTTAACGCGCGCAGGCGTTTAATTAAAATAAATCATATAATTATAAAAAACATAATATCTTCCAAAAAAGATGGTTGTGTTGTTTGTTTTATTCCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCCAAACAGGGATGTTTGGCGAGTTTGTGCTGCGTCTGGAACGCATCACAAACGGTGCGTCAAGACCGAGCGACGGCGGACAAATTTGTCTGGAACAAATTTGAACACCTGAGCATAGTGAAGGTGGCCTCGAAGAGGCGAGTATCAGGATGATACGAGTAGCGTAGCCGCAGGCCACATTCTGCAGCCAAAGCGCGGGATTGCTAAGGGAATTCGCTTTAATTCCCTTAGCTCGGACGTGGTCACTGTAGCTATTTTATTCACCTAAGCTCAAAACGTCCGAAACCACCGCACCTAATTCATTCTATCCACCAACCCAAAAAAAGACCTGAT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //