Array 1 1983-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHHD010000064.1 Klebsiella pneumoniae strain 7KE NODE_67_length_52664_cov_177.603943, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1982 29 100.0 32 ............................. TTCTTCCAGAGTTGATTTGGCATCACACAAAC 1921 29 100.0 32 ............................. GACCGTGCCAGTGGTACCGCCCAGAAGTAGCA 1860 29 100.0 32 ............................. GGTCCAAGTACCCCGACGGGACGCCGGTAGCA 1799 29 100.0 32 ............................. TTGCTGTATGCGGCGGCGTGATGACCAAAAAT 1738 29 100.0 32 ............................. CGCTGGGGCTATCGGCCCGTGAGCTTGACGGT 1677 29 100.0 32 ............................. TGGATGAAAACTTTAATTTATCAGCGACAGGT 1616 29 100.0 32 ............................. TTCACTATGCGTGATGGTCGTGTTTTTATCCC 1555 29 100.0 32 ............................. TCCAGCGTTTCCGGATTCTCGCGGCCCGTGTT 1494 29 100.0 32 ............................. CAAAAATGAAATAAATCCGGTTTAGGGGGTTG 1433 29 100.0 32 ............................. TTTCCACGGTCTCATCTTGTACCGCGTCGATA 1372 29 100.0 32 ............................. TTCTCCGCGTGCGGCCTGATCGCGGGCTTTAC 1311 29 100.0 32 ............................. CCCACAGCACGCTATAACACCCCCGCCACTAT 1250 29 100.0 32 ............................. TGACTGCCAAACGTATGGCGTAAAACATGCGT 1189 29 100.0 32 ............................. TTAGTAGTCCCGGTTATCATTTGTCGGCCCCT 1128 29 100.0 32 ............................. AGTGATGGATAATTCTGTCTCGTTCGGCTTCG 1067 29 100.0 32 ............................. GTGACGAATTTCGTTAACCTGCCGGCCAGCGT 1006 29 100.0 32 ............................. AAAGATTTAAGTAGCGCCGGTAAAACCGGATT 945 29 100.0 32 ............................. CTCATCACCACGATATTGCGCCCGGTCACGAA 884 29 100.0 32 ............................. TCGCAGCCGACCAGTACCCATTCCGGATCATC 823 29 100.0 32 ............................. GAGCGTCCGGATGTGCGTTACCGCCGTATCAA 762 29 100.0 32 ............................. TGAGAACGGCGAGTGGGAAACGTTCATGCTGC 701 29 100.0 32 ............................. CATGCCGCGGGGTGGCTGCTGAATACGTTCGA 640 29 100.0 32 ............................. GTCAGGGGATTACCATCCCTGACTTTGTACTC 579 29 100.0 32 ............................. TGGATTGACGATCGGGCGCAGGAAATTATCGA 518 29 100.0 32 ............................. CCTTCAGCGCCACATTCTCCGCCGCCAGCTGC 457 29 100.0 32 ............................. GCGTGCAAAATCAACGTCGCGGCTGTGGTTTC 396 29 100.0 32 ............................. GTCTGGATATTTGGGGGCGTATCGTTAATGTT 335 29 100.0 32 ............................. TCTTAACGATATTGCGGAGGGAACCGGAATTG 274 29 100.0 32 ............................. TTGAGCCCGCTATCTTCACCGATTGCGGCGTC 213 29 100.0 32 ............................. CAGGCGGAACCGGTGATAGATTTCGCGGGTTA 152 29 100.0 32 ............................. TCGGGGCGGCTCCGGCGATACGTACATCACCA 91 29 100.0 32 ............................. GCATACGCGCCCGGCTTTTTGGCTTCGAGATC 30 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 33 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATCACCGCCATTAAAAGCTGATCGAGAGTACCGACACCAACTTCAGCGAGTAGCGCTTTTTTGCGGGAATCAGCGAACCAGATGTGGCATTCACTGGCGGCGTTGCGATCGTCTTGCGCGTAATCTTCTGCCGTCTCATTGACTGGCTGCCAGATGGATTGCCGGAAAGTTTCTGACATTTCTCTTTCGCCATGAGCCAGTATAAGCGACGGCCTGGCATCATCGGCGAACAGGGCACGGTAAGCCGCCGACAAGCGTTTATACATAGCATTCGCGGTTGCCATGGTCGGCAGTCCAACGTAAAGTCCATGGCCTTTACCTGCAGACATTAAACGATGAGTCAGAATCAGTGCTGCTTCTGTTTTACCAGCTCCGGTTACGTCTTCCAGAATAATGAGTTGCGGGCCTGGCGATGAGATATCCAGAGTATTAGCTCGCTGCTGGAGCGGAGTGAGCGTATGGATAAAGGGAAACAGAGCTTGATGATTATGATAAAAGC # Right flank : GA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 81037-80645 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHHD010000006.1 Klebsiella pneumoniae strain 7KE NODE_6_length_81014_cov_174.742416, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 81036 29 100.0 32 ............................. GGTGAATGGTTTAAAAAGAATAGCCAGGGCAA 80975 29 100.0 32 ............................. TGGTAGCCAGAGAGCAGCCTGAACACCTGCGC 80914 29 100.0 32 ............................. TCCTGCAGATCGGAGACGGCGACAACATCGAG 80853 29 100.0 32 ............................. AGTACCGAGATGGCGATACACATCTTTTCTAT 80792 29 100.0 32 ............................. CTACCGCACAGCGGAATCATTCGGCTTGGTTC 80731 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 80673 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 7 29 96.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TCGTTGAGCCAGGTTTCCGATGCGA # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //