Array 1 12836-13043 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LZHK01000006.1 Gilliamella apicola strain Imp1-1 Gilliamella_apicola_Imp1-1_contig103, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     12836	    28	 100.0	    32	............................	TAACACTATTTCACCCGAACAACAACAGCAAA	
     12896	    28	 100.0	    32	............................	ATAATGATTAAACACTTAGTTAATACTGTTCC	
     12956	    28	 100.0	    32	............................	AATATGTTTCTGAATGTCCCTCGCCTGGCTAG	
     13016	    28	  75.0	     0	.C.......T.......T.CCA..T...	|                               	
==========	======	======	======	============================	================================	==================
         4	    28	  93.8	    32	GTTTACCGCCGAGTAGGCGGTTTAGAAA	                                	       

# Left flank :   GCATCCAATAGCTCTTCTGAAAGCCCATCGGTTTTATAATTATGAAATTGATAGCTTACATGATGATCATCAAGCCAAGTAAAAGCTTTTTTCATCGTGTTGCAGTTTTTGATACCGTAGATGATATACATAGTAGGTGATCCAACATTGAAAATAATAGCAAAGATTATAACAGTTATCGGCTTGAAGCGGCAAACTAAAGCGATTTATTTGTATTAATTCATATTAATACTCATATTTAATCTTAGTTGTTAAAGCCAAATGGTTATTAGTGAAAGTTTGAAAATTTTAAATAATTTGGATGGTGAGTTAAGAAATGAATTTTTGAACAGATAATTTCACTCATTTTGAAAAGATCAAACTTGTGCTAACCCTTTTTTTTAATAATAAATAAAATAGAATAAAAACAACACACTAAAAAAGTTCTAAAAAAAGGGTTTTTAAAAGCAAAAATCCTATTTGTCTTTTGCGAAACAAGATTTATAGTATATCGGATTCTA
# Right flank :  ATTAAAAAAGCCCTCAGACGAGAGCAATAGATGTCTACTGACAGAATAGCTGGCTATGGTTATTAGCTGTGTTCAAAAATTTTATAGAACACTTAAGCTAGTCATTAATAATCCATTATCAATAACATAAAATAAATATTAATCAATTAATTACAACATTTTTCAACAAAGTAACGCATAATTCGATTATCGGCGGTTAGTTCGGGGTGAAATGAGCAAACCAAAATATTATCTTGCTGTGCCATCACACAATGATTATCAATAAAAGCTAGCTGATTGACTTGCTCACCGGCTTTGGCTATATAAGGCGCACGAATAAATACTGCTGGAATTTGCTCACCAATATTTGGTATCTCTAACATTGTTTCAAAGCTGTTAATTTGCCGACCAAAACCATTGCGTTCAACGCAAATATCCATCAAATCTAATAATTCGACCTCGTTATGAGTTGTCGTTTTGCCACAGAGCACTAGTCCAGCACAAGTACCTAAGATTCCTTT

# Questionable array : NO	 Score: 5.55
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTACCGCCGAGTAGGCGGTTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-9.70,-9.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0   Confidence: HIGH] 

# Array family : NA
//


Array 1 298-439 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LZHK01000034.1 Gilliamella apicola strain Imp1-1 Gilliamella_apicola_Imp1-1_contig129, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence       	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	======================	======================================	==================
       298	    22	 100.0	    38	......................	ATCTTTCTATGACCACTGGGTAAGTGGTCTATTTTCTA	
       358	    22	 100.0	    38	......................	GGACTAGGAAGTAAATTTAATATAGCTATAATTTTCTA	
       418	    22	 100.0	     0	......................	|                                     	
==========	======	======	======	======================	======================================	==================
         3	    22	 100.0	    43	AACCGCCTATGCGGCGGTAAAC	                                      	       

# Left flank :   GCTGGCAAAGAGGCACAAATGAAAACACCAATGGCTTAATACGTCAGTTTATACCTAAGTCAGCGGCCATTTCATTAGTTGACGACAAACAGATAAAGAAAATACAATATCTGTTGAACACACGCCCAAGAAAACGGCATAAGTTTAAAAGCCCTGCCGATTTTTATTCTAAGGAGTTAAGAAGAATTGCACTTCATGGTGTAATCTAGGTTTTTTAACTTAATAATTTTGAATAAAATCAAGCTGTTATATAGCTGTGAACGTCATGCTGTTAAAAATAATAATGCCAGAATTTCTA
# Right flank :  CTAGAAACCGATATACTATAAACCCTGTTTAGCAAAAGGCAAATAGGATTTCTGTTTTCAAAAACCCTTTTTTATAGCGGTTTTATAATACTTTGTTTTTATTTACTTTTATTTATTAATAAAAAAAAGGGTTGGCAGTGTTTTAGCTATTTCTATGATGTGTCAATTTTATCGTTAAAAATTACTTATGTATCGTTTTGATTTTATTAAATTTGGGTTTTGTATGTTAAACAAAATATACAAAACCCAAAAAATAAAAAAATCAATCTAACTTAGGATGTTGATCGACTAAATTCTGACGCTGTTGTTGTAATGTTTCGATCTGCTGTTCTATATCTTCGACTCTTTGTTCTATTGAGTCAAAGTGATCTGATAATATTTCTTTTGCCTCTGACCTGTCTGATGCTGCAGGAGTTGCGCCGCGGAGTGGACGGTTTGCGGTTTCTTTCATTTTTATGCCTGTAAGTAAACCCACTAATGCTACAACCATTAAATAATAA

# Questionable array : NO	 Score: 5.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:-0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AACCGCCTATGCGGCGGTAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//