Array 1 136350-134803 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAITZZ010000011.1 Klebsiella pneumoniae strain MCL-2018-1 11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 136349 29 96.6 32 ......................G...... CCTGTGGCGGAACAGCAGCTTTAACCTGAGCA 136288 29 100.0 32 ............................. TTCCTGTTCGGCTTCGCGATTATTTCCACCTT 136227 29 100.0 32 ............................. AGACCGGTATGGAAGCGAAAACGGCAACCTTC 136166 29 100.0 32 ............................. AATTGGGCTACCGCATTATTCCACCCTCTGAT 136105 28 89.7 32 .....-......CA............... TGGAGTTTTAGATAGTCATAATCACCGTCGTG 136045 29 93.1 32 ............CA............... CTAATCAGCGGTATATTTTTTCTAATCTGAAA 135984 29 89.7 31 ............CT.T............. GACAGTCACTATGTTCGGTATGTTTAAAAGA 135924 29 89.7 31 .....T......CT............... CTCTGAGGATGATATGCACCGGCACAGGTGC A [135897] 135863 28 86.2 31 T............A..T....-....... TGACTTTTAGTAGTGCTTTTTTTTGTTTTTT 135804 29 89.7 32 ..C.........CC............... GCCATGCAACGTCTGAACGTCCGAAACATCCC 135743 29 93.1 32 ............CA............... AGCAGTTCGAGGAATAGTGACAGGCAGTGCAG 135682 29 93.1 32 ............CT............... GCAGCGGCCTGACGATGATCGATATGAACGGC 135621 29 93.1 31 ............C..A............. TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 135561 29 89.7 32 ............CA............T.. CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC 135500 29 96.6 32 .............C............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 135439 29 100.0 32 ............................. TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG 135378 28 89.7 32 ..........-.CA............... AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC 135318 29 93.1 32 ............CA............... GCACCCTCACGGATACCTTTTGCACAGTGTTA 135257 29 86.2 32 ......T.....CA..............C CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG 135196 29 100.0 32 ............................. TTACTTTTTGGCAGTTGGTAAAACACTTTTGC 135135 29 93.1 32 ............CA............... TGTGTGTTGGCGTTCGTTAAATATTGTTAGTA 135074 29 93.1 32 ............CA............... GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG 135013 29 100.0 32 ............................. GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 134952 29 100.0 32 ............................. TTCCGGACTCCTGTTTGCGGCAGTGGATTAAA 134891 29 93.1 32 ............CA............... CACTACCAGATCCGAATGGACACCCGTAACGA 134830 28 82.8 0 ............CAC........-....A | ========== ====== ====== ====== ============================= ================================ ================== 26 29 93.5 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAGGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACTGGCGCAGAACTCCGCCATCGCATGAGTATTAAAAATGCGACTGATGAAGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGGGGGCATGCGAATCATAACTGCGGTCTGGTTGAGGCTCACTGGACAGTAACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCTCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATTATCAACCGGTTATTTTTAGA # Right flank : CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGATAAATTCATGCCTTGAACTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGAACCAATTTATACTGTTTATATATACAGTATTTTTAGGTGGTCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCAAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.37, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : GTATTCCCCCCGCATGCGGGGGTTATCGG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [13-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.15,4.77 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], //