Array 1 36956-38691 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012664.1 Defluviimonas alba strain cai42 plasmid pcai42C, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36956 29 100.0 32 ............................. GCGTGGCGCGGTTTCACGGCATGGGCCAAGGA 37017 29 100.0 32 ............................. GCGGCCGAGCTGGACGCCAAGTTTGCCGAAGT 37078 29 100.0 32 ............................. GAATACAGCCGCGTCGTCGGTGACGATACCGA 37139 29 100.0 32 ............................. CAGCCGGTGAGCTGGCCAAGGCGAGCGTGCGG 37200 29 100.0 32 ............................. AGCAGGACCCTCAACAGCTATCATCTGTCCGG 37261 29 100.0 32 ............................. TCGCCCTACGGGCATGTATCCTATGCAATCTG 37322 29 100.0 32 ............................. GACACCACGTTGTGAGACATCATGGCAAACTC 37383 29 100.0 32 ............................. CGCCTAGGCGCGAGAGCCTGTCTGATCAGCCG 37444 29 96.6 32 ............................T GGGTTGGCTGCTGCCGCACCGGTTTCGGCACC 37505 29 100.0 32 ............................. CGCCTTATCGACAACAGTGCGGGCATCACCGG 37566 29 100.0 32 ............................. TCGCCCTACGGGCACTGTCCTATGCATTCTGT 37627 29 100.0 32 ............................. CGGTCAGGCGTGAGAGCCTGTCTGATCAGCCG 37688 29 100.0 32 ............................. GCGCGCGAACTTTTTGAGGACGGGGCGATTTC 37749 29 100.0 32 ............................. AGCCGGACCCTCAATAGCTATCATTTGTCCGG 37810 29 100.0 32 ............................. TTGGCGTGCCTTATCGACAACAGTGCGGGCGT 37871 29 100.0 32 ............................. GTGCTGCGCACATGGTCGCGCAGAGCCGGCGC 37932 29 100.0 32 ............................. CCCCATGCGACATGGATGGTCTGTCCGGGATT 37993 29 100.0 32 ............................. GCCGATTACTGAATAGGTTGGCCGCACGAGAT 38054 29 100.0 32 ............................. GCCATGGATCGGCTCGGACGGCCGATTTGGTG 38115 29 100.0 32 ............................. CGGCTGCGTAAAATTAATTCACGTGCCAAATT 38176 29 100.0 32 ............................. GATTGGATTGATATCCTATACGATAACACGGT 38237 29 100.0 32 ............................. TGTGGGTATGGCAAGGGGCTGACGCATCCCGC 38298 29 100.0 32 ............................. AAAAAAACCCGGCCAGGATCGACAGCCGGGGA 38359 29 100.0 32 ............................. TGCTTGGCCTGCCGGTGTTCATCGCAGACGTG 38420 29 93.1 32 .................C......C.... CTGGCGCAGATCAATTGTCTCCCTGCACCAAG 38481 28 96.6 32 ....................-........ AGATCGGCCGGAACGGCGGTGCCTGGCGAATG 38541 29 100.0 32 ............................. ATGGACGAGACGGTTCTGGCGGGTCTGGATCA 38602 29 100.0 32 ............................. AGGAGAGTGAGATGGACGTGAAATTCCGAGAC 38663 29 89.7 0 .....T.................CG.... | ========== ====== ====== ====== ============================= ================================ ================== 29 29 99.2 32 CTGTTCCCCGCTCGCGCGGGGATGAACCG # Left flank : GAGCTGCCCCGCCCGGATCCGCCGCCCGAGGCCCTGGGGCCGGCCTTCGACGATGGCCCCGCCTCGAGCGACGAGGGCCATCGTGGCTAGGCGCGGCGGCAGGAGAGGGGAGGCGCTGCGATGATGGTCGTCGTGGTGGCAAACGCCCCGCTCCGGCTGCGCGGTCGGCTGGCCGCCTGGCTGCTGGAGATCCGCGCCGGCGTCTATGTGGGCGACTATTCGGCCCGCACCCGCGAGCGGATCTGGGAGCAGGTGACAGCAGGCATCGAGGAGGGCGATGCGGTGATGGTCTGGAAGGCCCCCACCGACCAAGGCTTCGACTTCGCCACTGTCGGCCGAAACCGCCGGATGCCTATCGATTTCGACGGTCTGAAACTGGTCTCGTTCGCACCCCGCGGGGAGTAGGTCGTCGCCGCACCCCGGCCATGATGTGGGCGCGGAGATTTGGTAGGCTCTTTGACATTGTGATTTCCCTTTGCTGGCAATAGCCTGCAGCCAGT # Right flank : GCCGGTGGGCGCTGAAAAGGATCCCAGCTTCAAACCGCGTGATCAAGCCCACGGGTTATGAGGAGCTTGCCTCTCAGGAACTACAACGCAGCCGGTGTCAGCCGAAAGGCTGAAAACTCAACCTTCTCTACCGCACCGATTTGAGAGTGAAAGGCTTGGAGGTTTGAGGGTGACGGGACGTGAGATCAGGAGAGTGGCTCCTGGTGCCCGTCGTGGAGAAGATCTGATGGCCAAAGCAACCCAGAAAGTCACCCTGTCCCCCTCGCGGGACATCCCCTTCGACAAGCTCGTGCTGAGCCAGTCCAACGTCCGGCGCATCAAGGCGGGCCTCTCGGTCGAGGAACTGGCCGAGGACATCGCCCGCCGCGGCCTGCTGCAGAGCCTGAACGTCCGGCCGGTGCTTGATGCCAATGATGTCGAGACCGGCGTGTTCGAGATCCCTGCCGGTGGCCGTCGCTTCCAGGCGCTGTCGCTACTGGTGAGGCAGAAGCGACTCGCAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCTCGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-12.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 108621-101960 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012661.1 Defluviimonas alba strain cai42 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 108620 32 100.0 34 ................................ TCTGGATTCTCGAATGCCTGCACTGTATCAGTTG 108554 32 100.0 34 ................................ TTACAACTGATTGTATTGTCTGTAATGAAAAAAC 108488 32 100.0 34 ................................ GTCTGCAATGTGCCAAATTCACAAACATTTACCG 108422 32 100.0 35 ................................ AAGCAAATTTCCGTCCAAGGACGCGGGGTTTAGTG 108355 32 100.0 34 ................................ AAATCGTCGCGGATGATCTCACTCTGTCTGAGGC 108289 32 100.0 35 ................................ ATCCCAATACTGCATGTCCTCGTCTGCCATCTCCC 108222 32 100.0 33 ................................ TCGGTCCTGCGCAGGCGAACACGTTGATGGGCC 108157 32 100.0 34 ................................ CCCTCGGTCTGCGCGGCGATGGCTCGGATTGCGG 108091 32 100.0 34 ................................ CCGTATGGCCTCGCGTTGCGCCTCGATCTGCGAC 108025 32 100.0 34 ................................ GGGGTGTCCTCTGCCGATTACGCATCAGGCGGTA 107959 32 100.0 35 ................................ GCCGCCGATGCCGGCTCCTGGACGGTCATCATCAC 107892 32 100.0 34 ................................ ACCTGTGTCGCCTGATTGACCGCTTAAAGGCTGA 107826 32 100.0 34 ................................ ACCGAATTGTGTGACGAACGTGCAGCCTTTAAAG 107760 32 100.0 34 ................................ AACATTATGTTGAATGCCGCAACAGGAATCTGAG 107694 32 100.0 34 ................................ GTCGCGCAGAGCCGCCTCGTCTTCTTCGCTCAGG 107628 32 100.0 33 ................................ AGGAAGCGCGCGACGAAAACGTCGTCGGCAGCG 107563 32 100.0 34 ................................ CCCGTCCCTGTCGGGCCGGTGACAAGCCCGTGTC 107497 32 100.0 34 ................................ AGCACGTCGCCCTCGCGGCAGATCAGGACCAGCG 107431 32 100.0 33 ................................ AATGCGCGGTCGCACAACGGCAGGAGCAATCGG 107366 32 100.0 34 ................................ GGGCAACCGTCGCGCCAGGTCGCGCAAAAGGTAG 107300 32 100.0 34 ................................ AATAATCCTGAAAAGCGGTTTGCAATTGGACCAT 107234 32 100.0 34 ................................ GGCACGGTTTACATGTCCGATCCGGGCGGGACAT 107168 32 100.0 33 ................................ GGATGCAAGCAAAGACCCCAAGGGGGAGGCATC 107103 32 100.0 34 ................................ TCGCAGTCGCGGAACAAGGCGGAAAAGAACCCTA 107037 32 100.0 34 ................................ TATTGGGGGCGGGCTTGCGTCGTGGGGGCGCATA 106971 32 100.0 34 ................................ ACCATAGCCCTGCTTTAAGGAGTCCTGAAATGAC 106905 32 100.0 35 ................................ CGCATCTAGGCCACGTCACCCGCGCCAGCGTTGGC 106838 32 100.0 36 ................................ GGCGATAGGTCAGCATGGGGCCAAGGCAGGGTGACG 106770 32 100.0 35 ................................ CATGCTGACAACCCCTGCCGCCATACCGCGCTGAA 106703 32 100.0 34 ................................ TCGGTCCCGGCGTCTCGCTGCTGGCTCATCTGGA 106637 32 100.0 35 ................................ CGTGAACTGTATGACGAAACCGAACGTCACCCACG 106570 32 100.0 35 ................................ CCGTCTGCGCGCTGCGGAGTAGCGGTTACACCAAG 106503 32 100.0 34 ................................ CATCGTCAACCGACCACTTGCGCGGTTCGGTGCG 106437 32 100.0 34 ................................ CGAGATACTGCACAGCGGCGAAAACCGAGTTTGT 106371 32 100.0 34 ................................ TACGTGCGGTCTATCAACCGGCTTAGCCATGAGG 106305 32 100.0 35 ................................ CATTGAGGATGGATTTCGCGCGCTCGTATTGGGCG 106238 32 100.0 34 ................................ TCGCGCTGGAAGAGCGGATCCGCCTGCGCGAGGA 106172 32 100.0 35 ................................ GGCTGCAACGGTTGTGTTGTCAGGCTGCGTGAGCG 106105 32 100.0 35 ................................ TTGCGAGACGCTGCCAACTCCCTGAAAGACCGCGC 106038 32 100.0 37 ................................ TTGCGCCCCGTCTCGGCGTGCAGAGCCGCCACCTGCG 105969 32 100.0 33 ................................ CGGGCGCGGCCCACAGCCGCGTCCTGCGGCAAG 105904 32 100.0 35 ................................ AGGCCCTTGTGCATAGCGATGAGCGCCGGCATGTG 105837 32 100.0 34 ................................ GGTCCAGTCAGCTAGCGGCATCGGAGCCTCCGGG 105771 32 100.0 35 ................................ CTTCGGGGGGCGATCATGCGGACCGGGGTCGGGTT 105704 32 100.0 35 ................................ CATGAGGCCGCCGCCGCCATCCGAGCCATCCCCAC 105637 32 100.0 34 ................................ CCGCGCGGGGTCTAATAACAACGGTGGACGGGGG 105571 32 100.0 34 ................................ ACCAGCACGTCGTTTGCGTCCTTGCAGCCCTCGG 105505 32 100.0 34 ................................ GGCGGCATCTATCGCAACGCCCGCTATGTGGCGG 105439 32 100.0 35 ................................ ATCACCCTCCATGAGCGGCTCAACATCAGCCGGGC 105372 32 100.0 35 ................................ ACGACGACGCCGGTGCATATCTGGCCAACATGGGG 105305 32 100.0 32 ................................ CGGCCGAGGATGCGGCAATGGGCGGTTACGTC 105241 32 100.0 34 ................................ CTGTTTGAGGTCAAATCGAGAGACGGGAAGCTGT 105175 32 100.0 34 ................................ TGCGCACTACGCCGCTGATGGCATCCGTCCGCTG 105109 32 100.0 34 ................................ AAAGGAGCCTAACCATGAAGCTTGTCCCGAACTG 105043 32 100.0 34 ................................ CGGGACATGCGGCGCGTGGTGAACGGCACTGATC 104977 32 100.0 34 ................................ AGGACATAGCCGATGCCGAGGGCAAGCAGCGGGG 104911 32 100.0 35 ................................ AGATCGCGGCCGTGGCTGCGCTGATCTTGCTGGTG 104844 32 100.0 36 ................................ ACGAGCTTTGCCTTTAACGTTGGGATCGCAGGAGCT 104776 32 100.0 33 ................................ TCGCCATACACCTTCGGGCGCAGCTTGCCGGCC 104711 32 100.0 35 ................................ GGCGATCTGGCGGCGGGCGGCTTGCTGGTCGGTGG 104644 32 100.0 35 ................................ TGACCGCGCCTGAGTGACAGCGGGCTTGCGCATGA 104577 32 100.0 34 ................................ CTCGATGTAAGCCCGGCGGAACCGACGCTTGCCG 104511 32 100.0 34 ................................ CGACAAACTCGCCTGCATCCGCGCCATGCCAGCC 104445 32 100.0 35 ................................ AAGGTGGAGCCCCATCGTGGCAAACTGTGGGCCGT 104378 32 100.0 36 ................................ GCCACCCAGAAGTGGCTGAGAAGCGTGGCAATCCGC 104310 32 100.0 34 ................................ TGGGATACACCCAGTGCCATTTCTTCGCCGGAAT 104244 32 100.0 33 ................................ GTCAGCAGGCGCAGGAAGCCCCGTTCCCACCTT 104179 32 100.0 35 ................................ ATCGGCCTCGGAGACGCAGGCGTCATTCGCCAGCC 104112 32 100.0 34 ................................ AGGTATTGCTCCGCGATCTTCACCAGAGCCTCAT 104046 32 100.0 35 ................................ CCTCGCGGCCACGATCATCCTGCCGCTGATCGCGC 103979 32 100.0 33 ................................ CTCCACTACACCGAAAACTGGTCCCTGAAGGAA 103914 32 100.0 34 ................................ TGATACTGGCGACGGCGGCGGCTGGAAAATGGAC 103848 32 100.0 34 ................................ TCACAAAGGATGAATCCATGACTGATCAGATCAA 103782 32 100.0 34 ................................ TGGCCCGGATGCGCGCTGATATTGAGCTTGAAAG 103716 32 100.0 34 ................................ ATTTGCAGTTCGGCCCTGTCTGATTGCTTCAGCA 103650 32 100.0 34 ................................ AACATCAACCCAAGTTTCGGACTTGGAACCGGAC 103584 32 100.0 34 ................................ ATCAGCACCGCGCGCGCGACCAGATCGCAGCACA 103518 32 100.0 36 ................................ GTCGGCTATGGTACAGCCATTGTCAGCGGGCCGGAT 103450 32 100.0 34 ................................ CGGTTGGCCCGCATACGGTGCTGTATGCCCCCTA 103384 32 100.0 34 ................................ AATGCAATCCGCCTTGGTTTGACGTGTTCCGAGA 103318 32 100.0 35 ................................ CATGATCGCACGGCACACGCGGCAAAGGGCAAGTG 103251 32 100.0 34 ................................ ACCCGGGCCGGCGTTGCTGCCGCCTATGTGGACG 103185 32 100.0 34 ................................ CACAGAAATCATGGGCGGAGCAGCAATGTCGATG 103119 32 100.0 34 ................................ AATCCACTTGGCGCGGGCTTCCACCCGGTCGGCA 103053 32 100.0 35 ................................ AGGCAATGCATAATCGGACGGTAACGGGTCGGCGG 102986 32 100.0 35 ................................ TTGGACCGATCTCGATCCCCAATCAGGCGGGCGAG 102919 32 100.0 35 ................................ ACTGATAGTCTGATAAAGAAACCAACCTTCACCAT 102852 32 100.0 33 ................................ CCGCATCGGCGGCCACTACCGTTGACGCCTACC 102787 32 100.0 34 ................................ AGCGGCACATAGCCAGACTTCACCCCGTCCGGGA 102721 32 100.0 34 ................................ TCTTCAAGTGCTGCCACGCGCGCTGCTGCGCCGG 102655 32 100.0 33 ................................ ACGTAGTCCTGATCGTTCTTGTAGGCGACCATG 102590 32 100.0 35 ................................ ATGGATCAGGTCCCCGACACAGAGAGCGAAGGAAC 102523 32 100.0 35 ................................ AGCCTGTGCCTGCGCCGCCTTGCCCCGCAGCTTGC 102456 32 100.0 34 ................................ GTCAACAGATCGCGCTGAAAGACGTGATATTCTC 102390 32 100.0 35 ................................ AAGGCGATCTGTTTGCGCAAGGTCTGCGTACTCTG 102323 32 100.0 35 ................................ TCGGCAGTGCGCACCCGCCGGTCAAGGTGTTCGTC 102256 32 100.0 34 ................................ GCTGATCGCGGCCGAGATATAGCCGCGCAGGCCC 102190 32 100.0 35 ................................ AGGGCACAGGCTCACAACCTCGAGGTCGCTGGCCT 102123 32 100.0 35 ................................ GTCGTCACCTGGCGCGAGGCCGACGGACGGCGCAG 102056 32 100.0 35 ................................ TCAACCTGGACGCATTGCCGCCCATCGGCCAGACC 101989 30 93.8 0 ..................-.......-..... | ========== ====== ====== ====== ================================ ===================================== ================== 101 32 99.9 34 GTCGCCCCCCACCCGGGGGCGTGGATCGAAAC # Left flank : ACCTATGACGTGCGCACCCTTGAAGACGGTGGCAAGAGGCGCTTGCGCCGGGTCGCCCGCGCCTGCGAGGATTACGGCCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAGGTCGATCCGGCGCAATGGGCAAAGCTGAAGGCGCGGCTGGAGGGGATCATCGAGCCCGCGCATGACAGCCTGCGCTACTACTATCTCGGCGCCAACTGGACGCGCCGGGTCGAGCATGTCGGCGCCAAGCCTGCGACCGACCTCAACGGCCCGCTCATCATCTGACCGGGGGGGCGGGGGGCGGACGCAGGGCGCCACTGCCCCGGCAGCTGTGCGAACCCCAAGCGTGCCGCAGTTCCGCCCCAGGTTCGCAAAGGGCGCAGCTCTTTGAAATCGTTCATCAACAGGCCTTCAGCCGAGGACGACGCCCTCCAGCGGCGCTGCCGAGGCCTCCGTTCGCACATCAATGTCCGTTTACCGGGTGCTTTCGTGACCTTATACCCCCTGGA # Right flank : CGCGGTGTCGCCGCGCGACGGCCGACGCACCATCCGCTTGGCCGGCTCCGTCGACCCGTCGCTGCCATCATCTGTCTGCAATGAATGTCAATCCGGCCCAGACCATGTCACAGAGCGGCATTCAAACTGCCCGAGGAGTAAAAACATGAAACGACTTGCCATATTTGCCACCGCGGCCGCCACCATGCTGGGTTCGGCCACCGCGATCCATGCGCAACCCCACAGCAATGATGCCTGCCGGCCGGGTGAAAGCCGCTGTCTTCCGCAGCAGGGGCAGAAATCCCAGCCTGGCAAGGGCAGCCCCGAGCTTGGATCAGACCGTTCGGCCGCGCCGAGACCCGGGGAAACCCCCGCAACTCGTGTCGCAGCGCCGCAAGCCGGCGACAGCGGCAAAGGCGGCCGGCCTTATCAGCGCGCCAGGGACAGCCGGTTCAGGGAGCCGCCACGCGGGCAGGAATACCGTGTGGTCAACGACCACCTTGTTCTGGTGGACAGCCGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCCACCCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.20,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 3889487-3892683 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012661.1 Defluviimonas alba strain cai42 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 3889487 36 100.0 30 .................................... TACGCCCGGCTGGCGCTGGTCAAGGAATAC 3889553 36 100.0 30 .................................... AGGGTCAGCACGGTCTTGATGTACCGCTTG 3889619 36 100.0 29 .................................... TCCACGACAGTTGCGATGGCGCCGAACTT 3889684 36 100.0 30 .................................... AACAGCCGGATGGGGCCGGCGGATCATGCC 3889750 36 100.0 30 .................................... GTTCTGCGGTGGCGAGGCTTGGCTGAACGA 3889816 36 100.0 30 .................................... TATCCGACCCGCCCTTGGTCAGCCCGAACG 3889882 36 100.0 30 .................................... GGGTTGCTGTGCCAGCGATGCACGAAGCCA 3889948 36 100.0 30 .................................... TCCTATTTTGAGGCGACGATCACGGACGGC 3890014 36 100.0 30 .................................... ACCGCAGAGAGGGCTAAGCGATGAGCGAGG 3890080 36 100.0 30 .................................... CGTTGGGCATCCCGCCTGACCCTGACCGTG 3890146 36 100.0 30 .................................... TCCAGCGTGCCTTGGACGCCGCTGGCCGGT 3890212 36 100.0 30 .................................... ACCTCGCGCGCGTCTTCGCCGGATGTCTCG 3890278 36 100.0 30 .................................... TCCTCGAACTGAGCGATGCCGACGCCGTTC 3890344 36 100.0 30 .................................... TTGTAGCGGGGGATTGCGTCTTCCAGCGGT 3890410 36 100.0 30 .................................... TTGTCGGGCGCGGAGAGACGGAAGACGTCT 3890476 36 100.0 30 .................................... TCCCGCGTGTAGCGGCCGCCAGCGCCTGGC 3890542 36 100.0 30 .................................... TTGACGATCCGGCGCGCGCTAATGTTCTGC 3890608 36 100.0 29 .................................... AAGCCAGACCAACGGGCGAAAGAACTCCA 3890673 36 100.0 30 .................................... TTTGTAGGGCATCACGTTCGGGCCGAGCTT 3890739 36 100.0 29 .................................... GCGCTGCGTCCGCGCTTATCTTCTGCGGC 3890804 36 100.0 30 .................................... TCCATGAGCTTGGTGAAGTTGGCTTGCTTG 3890870 36 100.0 30 .................................... AGATGACGTGAGGGCGACATGGCAGACATG 3890936 36 100.0 30 .................................... AGCGCCTCGCCAGCGGTGTATTCCGCGATG 3891002 36 100.0 30 .................................... TTGTCCGGCGCGGAGATCCTGAACACGTTA 3891068 36 100.0 30 .................................... CGGACGCGGCGACCGATGGAAGTTTGACTT 3891134 36 100.0 31 .................................... AATGGCTCGGATGCTGCGGTTGAATCGTTCA 3891201 36 100.0 29 .................................... TCACCAGCCCCCATGCGTTATGGATCATC 3891266 36 100.0 30 .................................... CAACCCCCGGCACCCTTCCCGCATGTGCCC 3891332 36 100.0 30 .................................... TGCAGCAGGACACCTCTCACCGGAATGTAG 3891398 36 100.0 29 .................................... ACGTCGCAGGGTAAGCCGGTGTTCGAACG 3891463 36 100.0 30 .................................... CGGCGGCTTTGTCGCCAGAGGTCGGCGCGG 3891529 36 100.0 30 .................................... GTCAGCCGGCGCGTCCAGCGGGGGGCATTG 3891595 36 100.0 30 .................................... AGGCCGAGCGTGGCCCGCATGGCGCCCACG 3891661 36 100.0 30 .................................... TGCGCAAGCCCGCTGTCACTCAGGCGCGGT 3891727 36 100.0 30 .................................... AGATCCTCAGCCAGCAGCAGCGTCACACCG 3891793 36 100.0 30 .................................... AGGACAACCCGGCCGGTGAGAACCGCACGA 3891859 36 100.0 29 .................................... TCCGCACCGCACTTGACCTTGTCGGCAAG 3891924 36 100.0 30 .................................... TCGACCGGGTGACGGTCACGCCGGCCGACA 3891990 36 100.0 29 .................................... ACCACGGGGCAGATCCTGATCCTGCGCAA 3892055 36 100.0 30 .................................... TAGCGCCACGGGGTAGACCAGCTCGATTGC 3892121 36 100.0 29 .................................... TCAGCACCTTTGGTAATGTCACCCATTGC 3892186 36 100.0 30 .................................... TCACGCCGACTATGGGCGCAGCTTTCGACA 3892252 36 100.0 30 .................................... GGAAGGTCCAGCGTCTCGGTCAGGCGGATC 3892318 36 100.0 30 .................................... TCTGTCAAGTCGCCGTGGTCAGCGCCGAAG 3892384 36 100.0 30 .................................... GTAAGCACAGCGCTGCCCCCTGCCAGCGCG 3892450 36 100.0 30 .................................... ATCGAAACGCGGAATACCTGATAGACCGAA 3892516 36 100.0 30 .................................... CCGAGCGCGGAACGGACACAGGGTAAACCC 3892582 36 100.0 30 .................................... TCACGGCGACGGCGAATGCCAGTGCCTCGG 3892648 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 49 36 100.0 30 AGTGTAGCCATTCAGAAATCGCGGTCCAGCGGCAAC # Left flank : TGGCGCTAAGCTTCGAGGCCCGGCGCCTGTCGCTGGCCCTGCCTGAACCGCCCGCCCCGCTCACCCTTGCAGGCCTCGGGTCATGAGCGGCCCGGCCACCTTTCTCAGCGGATATCGTCTGATGTGGATCCTTGTCATGTTCGACCTGCCGACCGACAGCAAACCGCAGCGCAAAGCCGCAGGCGATTTCCGCAATTTCCTGCTGGATGAGGGGTTCGAGCGCAGCCAGTTCTCGATCTATGCCCGCTTCATCAACGGTAAAGAGGCTTTCGAGACCCGCATCCGTCGCATCGAACGTGCCCTGCCCGCCCATGGCGATGTGCAAATCTTGTCCATGACGGATCGCCAATATCGCGACATCGTCCATTTCTCGGATCAAGGCCGCAGATCTGTGCGACAAAATCCGTCACAACTGGTGCTGTTCTGATGCGATTCGACGATTTTCACCACACTCACCCCGCCGCTTTTCCGTGCCATTGCAAGGCCTTGCGGCGGGACGA # Right flank : CTGACGTGGCCGACGACACCGCCGTAACCATCCGGCGTAGGCCGCGAACGGGTAGCCGCGTTCAGGGAGTGGCCTTGGGTGCTTTGGGCTTGCCGGGCCGCGGCGCCCATTTCTTCGCGAGCTGGTCTAAGCGTTCGACCATCCGCTCGATCCGGGCATCTTCGGGATCGAAGGAACTCCCTGACCAGCTGACCACGTCGTCGTGCTGCTCGTGGTCCGGATCTGCGAGGGCTTCGAGGAATTCCTCGTAGCCCGGGGCACCGCCGACGTCCTCGGGCGGACAGGCCCCGCTGGCCTTCAGAAGCCTTGGATAGGTCACGCCCGGTGCGGCCTCGGTGACCCGTTCGATCCGGATGCTGTGGTCCCAGTCATCGCCGAAGTCGTAGACATACTGGATCGTCCTGGCGCCGGTGTCTTCGAGCACCTTCTGCAAGGTTGCCTTCTTCGCGGGCATGGGGCCGTCGTAGAACCCATCGGGGTCGGGCACGCCCCAGCCGACG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGTAGCCATTCAGAAATCGCGGTCCAGCGGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //