Array 1 223917-225657 **** Predicted by CRISPRDetect 2.4 *** >NC_014734.1 Paludibacter propionicigenes WB4, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================= ================== 223917 27 100.0 39 ........................... AGAAAAACATGTGGGTATGTGCATGTCCTTGTTTTAGTT 223983 27 100.0 38 ........................... TATTACTGCTGCAATGCAGATTGGCGTATGTTGTAGTT 224048 27 100.0 38 ........................... TATTACTGCTGCAATGCAGATTGGCGTATGTTGTAGTT 224113 27 100.0 39 ........................... GAAAACGAAAATTATAACTTCAATAAATTCGTTGTAGTT 224179 27 96.3 37 .....T..................... TAAAACCGTACAATGGAGAAGATAACGTGATGTAGTT AG [224204] 224245 27 96.3 39 ..................G........ AGCGGTGCGGATTTGAGCGATGCGAATTTGGTTGTAGTT 224311 27 96.3 38 .........A................. AATTAGGATTATGAGTTTATATAGTTTGAGTTGTAGTT G [224337] 224377 27 92.6 39 .........A..........T...... TAAACATTAAAACAATAAACGGAAGTTCGAGTTGTAGTT 224443 27 96.3 39 .......................T... AAAGCAAAAATGAACACAAAACAATTTGAAGTTTTAGTT 224509 27 96.3 39 ......G.................... TACAGCAGTAAGCGGAAACACTCAGGCAATGTTGTAGTT 224575 27 100.0 39 ........................... GCCGTAAAAAATCCACACAACGATAAGATGGTTTTAGTT 224641 27 96.3 39 .......................T... CTCTTACTGGCTGGTGCCGGGCTTGCTGCAGTTGTAGTT 224707 27 96.3 39 .................T......... AGAAAGAGTGATGAACGACGAGCAGGATATGTTGTAGTT 224773 27 96.3 39 .................T......... TTACACCTGATCAATGGAAATTGCTTAGTGGTTGTAGTT 224839 27 100.0 39 ........................... TGTGATTAATGATATTACCGTAGCTAACGGGTTGTAGTT 224905 27 88.9 39 .......T.A........G........ AAAACAACCTGCATGGATAAATTATATGACGTTCTAGCT 224971 27 100.0 39 ........................... TAAAAACATATTTGCTGAAGACTATGGAAGGTTGTAGTT 225037 27 96.3 39 .........A................. TGCTATTCGGAATAGATTTTTACCCCACCAGTTGTAGTT 225103 27 96.3 39 ....................T...... TGGGATTATGAAATAACCGATTATAAACTAGTTGTAGTT 225169 27 96.3 39 ....................T...... AGAAATCAAAAATTGATTCTTCAGTAGCTTGTTGTAGTT 225235 27 96.3 39 ....................T...... CGAATCCTAATGGTTATATTACTGCTTCATGTTGTAGTT 225301 27 96.3 39 ....................T...... TAAATTGAAAATTTCTGGACAAGCTCCAGTGTTGTAGTT 225367 27 96.3 39 .........A................. AAACGAATCACAGAACATGTGAACCTGGTAGTTGTAGTT 225433 27 100.0 39 ........................... AGATGATAACGTAGGCAACATCCCTGATAAGTTTTAGTT 225499 27 100.0 39 ........................... CGTTATTCAGGAGAGAGTTTCAAAGAGTATGTTTTAGTT 225565 27 96.3 39 .........A................. TAAAACATTGGCTAATAACAGAACTAGGGCGTTTTAGTT 225631 27 96.3 0 .........A................. | ========== ====== ====== ====== =========================== ======================================= ================== 27 27 97.1 39 CCCTTCAATTTTGGGATAATCCACAAG # Left flank : AAATGGGTAGCAGCGTCGGCCAGTATTCCGGGTGTTTTCGAAACGATAAAACACGGCGAAACGCACTACGTGGACGGTGGATTGCTCAATAATATGCCGGCGCAGGGCATTGAAGAGCTATGCAGGGATATTATCGGGGTGGACGTTATTCCATATAAACTGTCGGTGGATCTTAAGCGCCCGATGGATACGCTGGCTTATGCCGTACGGGCCATGGAGCACCAAAACTCACTCCCCGGGCGCGACTTGTGCCGCTTTATCATTGAACCGCCTGCCATCGAAACCTTTCATGAGTTTAGCTACGACTCTTACTTCACTATCTATCATCAGGGCTACGAAGCTGCCAATAAATTTATTGCAGAAAATCCGGAGATATTGCGTTTGAAGAAGTAGTGATTTGCTGTAGGACTGCAATTAGCTAAGCTAACCTTTATAAAAACAACCCCGAATGATGAATTTCATTCGGGGTTGTTTGTGCTTTGATGTCAGCTGTAGTGTTA # Right flank : GATAGTATCTGTATTTATCAGTAACCTAACTACTTTTACGCTTAAAAGCTATGCAAAGCTACGATAATACAGCGTATATACAATCCCATCTGCTATTTTTTCATTTCTAATAAGCTGCGGCACATATTGCAATAAGCCATCATTACCTGATTAGTGCAGTATTGATATTCCGGTTTGTCTTTGGCACTCGACCCCAAATGGTAGATTTTCTTGGGTTCCAGACTTTCTACCTTCAGTTTATGGTCGGCATTGAGCTTTAGTTTCAATATCATACCGTGTTTGTCGAACAGGTCAATAAAGGCTTTAGAAACCGCATTCTTTAGTTTGCGGTCGTAATGCAACAATTCACGCAGTTCGTTTATCAGGTCGATCAGAGAAAAGTCAGCTGCATCTTTTGTAAGGTAATTAAAGTGAGCAATGTGGTTACGAATATCATACATTTGCTTTTCTTTAATTTCATCATTGCTTACATGTAGAAATGCATTGTTATAATAATTCCT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTTCAATTTTGGGATAATCCACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.26%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //