Array 1 430991-426635 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNKD010000003.1 Ideonella azotifigens strain CCUG 75669T NODE_3_length_574813_cov_81.482423, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 430990 28 100.0 33 ............................ AGACCGGCCCACCACCGGCACGGACTCAATCAT 430929 28 100.0 32 ............................ ACGTCAGGCATGCGCAACTGATGCGTCTCATT 430869 28 100.0 32 ............................ ACACCCCAGGGGGGAGCAGCAGGCGAAGATGA 430809 28 100.0 32 ............................ TAAAGAAGGCGGGCGACACGTCCTCATCAGAG 430749 28 100.0 32 ............................ GAGTGGATGCGATGCGTGCCATTGAGGCAGCG 430689 28 100.0 32 ............................ TTGCTCAGTCAAACGTTGTCGAATCGATTACT 430629 28 100.0 32 ............................ ACCCCGGCGCCACTACTTTGTCACCCTGGCCG 430569 28 100.0 32 ............................ AAAACGCCGGCCGTCGAATACCACTTGGTCGG 430509 28 100.0 33 ............................ CTGCAGCGCATCTCCGATCCGCACGCTATTCCT 430448 28 100.0 32 ............................ ACGACGGTTGGAAGCAACGTCATCACGGCGGT 430388 28 100.0 32 ............................ TGTGCGGGCACATACACGCGCCACTGGGCGGC 430328 28 100.0 32 ............................ AAATAAGCCGCGCGAGCGAATCCGCGTACAAC 430268 28 100.0 32 ............................ ATGAAGAGCACGCGCTGCGCGCCGCTGACCAA 430208 28 100.0 33 ............................ TTCAGCTCGACCTTGCGGCGCTCGACCATCTTC 430147 28 100.0 32 ............................ AGGTGGTGAACGCCGAGATTGCGCCGATGCGC 430087 28 100.0 32 ............................ ACTACGAGCGCCACCGCGAGCAAATTATTGCC 430027 28 100.0 32 ............................ ACCGACCCCGCCGGCGAACTGCCTGCACAGGC 429967 28 100.0 32 ............................ AGTTTCGACGCGCAGTGATGCGTGAGGCCGTG 429907 28 100.0 32 ............................ TGACAGATTACAAGATCTTCGCACCACCGAGT 429847 28 100.0 32 ............................ TCACGTCAACAAAGGAACTCTCCGTGAAACTC 429787 28 100.0 32 ............................ ATAACGCAAGCCCAGGATGTCCTGTGTGATTA 429727 28 100.0 32 ............................ TGCCGAACTTCAGCGGCGGCGCCAACGACGCA 429667 28 100.0 32 ............................ TGGCCAGGAAGGCAATTTCCTGCGGGCCGACC 429607 28 100.0 32 ............................ GCCTTCCTTGGCTTCAGCGTGTCCGCCTTCGC 429547 28 100.0 32 ............................ AATCTACCCCTTGCGTCACTTGAAGAGTCCAG 429487 28 100.0 32 ............................ TCGTGCTGGTCCATGCCTAGTCAACCGTTGCC 429427 28 100.0 32 ............................ ATGACCAGCGACCAACAAGAGCAACAGACCAT 429367 28 100.0 32 ............................ TCACCCCCGCCCAAGCCGAAGCCGTCTATAGC 429307 28 100.0 32 ............................ AAACGGACAAGCGCAATGAGCACGCACGATTG 429247 28 100.0 32 ............................ AGATGGCAACGGCACATCCCACGACCCACCTC 429187 28 100.0 32 ............................ TCACTCAATCCCAGGCCGAAGCGGTCTACAGC 429127 28 100.0 32 ............................ AGACCGGCCCACCACCGGCACGGATTCGATCA 429067 28 100.0 32 ............................ ATGTGCGCCGTGATTGATTGGATGGTCATGTG 429007 28 100.0 32 ............................ ACGATGACGGCGGGATCGGACACCGTGTCGTT 428947 28 100.0 32 ............................ AACGAGCCAGGCGGGTACGCGGGCGAAGACAT 428887 28 100.0 32 ............................ AGAAGACAACGTGCACGAACTCTGGCACGCGG 428827 28 100.0 32 ............................ GTTATGTGGATGACAGACGCAGAAGTAGCTGA 428767 28 100.0 32 ............................ GCGCACCAAACTCAGCAGCGCCCAGAGGAACA 428707 28 100.0 32 ............................ TGCACGCTGGACAGGATGTGGCCGATCTGCTG 428647 28 100.0 32 ............................ AACACCTCATCAGCCCGACGCGCTTCATACGG 428587 28 100.0 32 ............................ TGAGCGTTTCGACGGGGACACCTTGCGCCGCG 428527 28 100.0 34 ............................ TATCTTCGTTCGGTTGGTATCGGACTGTGATTTC 428465 28 100.0 32 ............................ TGGGGGAAGAAGCCATGACCACCTTGCCCAAC 428405 28 100.0 32 ............................ ATCAAAGCGGCTGGCGGCGTAGCGGCGCTCGC 428345 28 100.0 32 ............................ ATCGAAGAAGAGATCGCGAATGCGCACCTGAT 428285 28 100.0 32 ............................ AGACCGAGCGCCTAAAGGCGCGGCTGATCGCG 428225 28 100.0 32 ............................ TCGGCACGCTGCCCAGTGACGACGCCGCCCAG 428165 28 100.0 32 ............................ CGGTCGAAACCGCCGAGGTGACAGCCTTCAGT 428105 28 100.0 32 ............................ ATGCAGAGATGGAAGGCAAGTATGTGCGCTGG 428045 28 100.0 32 ............................ AGACCAGCCGCTGGGCGCCCAAGGAATTCGCT 427985 28 100.0 32 ............................ ATTGGCGGCGCGAAGGACTTTCTCTTGTCCGC 427925 28 100.0 32 ............................ ATGCAGGAGCACCATGATGAACCGGATTGTTC 427865 28 100.0 32 ............................ ACTGCACGCCCATTTCCCGCGCTATGGCGTCC 427805 28 100.0 32 ............................ TATCCTGACCGGCAAGCTGAAGGCCAAGATGA 427745 28 100.0 32 ............................ TGCGCCGCTGGTGGCTGATCCCGCGCAACCGC 427685 28 100.0 32 ............................ ACACCGCGCTGCTGCGGCAGGCGTTGGAGACC 427625 28 100.0 32 ............................ ACCAATGCCGGCGGCGGCGCCTCGTGGCGCTC 427565 28 100.0 32 ............................ ATTCACTGTCCGCGTAGGTGATCTTGGCGTAG 427505 28 100.0 32 ............................ CCTGGCGCTGCTACGGGTGCGGCAGCGAGGGC 427445 28 100.0 32 ............................ TGCTGCTGGCCATAAAGCAGCTTGATGTCGCG 427385 28 100.0 32 ............................ GCCATGACGACGCTGCGCGAACAGATCACGGC 427325 28 100.0 32 ............................ TTCCTGGAAGACAACCGCCAGGACGTGGCCAG 427265 28 100.0 32 ............................ TGGTGATCCCACAGATCAGCGGCGCCTGCCCC 427205 28 100.0 32 ............................ CTACAGAGGGCAGGCCAGGCCGCGTGGTGCGA 427145 28 100.0 32 ............................ AGATGGCGTAGGAGGCCACATGCAAGCAGTGA 427085 28 96.4 32 .............C.............. ATCACGGTTGCCCAGCTCGTCGCGTGCGGCAT 427025 28 96.4 34 ..................T......... ACTGCTGGCCCGCGGCGACGTGAACCGGCCGTAA 426963 28 100.0 32 ............................ ATCGAGTTCATTCTCGACGTGGCCCAGTGGAC 426903 28 100.0 32 ............................ TGGAGCTGGCCGGCGTGCCGATCTGGTGGCCC 426843 28 100.0 32 ............................ TCATGTGGGGGCGCAACTTCCGCTTCGTCAAC 426783 28 96.4 32 .............C.............. GAAGTACTGGACCCAGGCGAGGTGGGCCGAGT 426723 28 92.9 33 .............C.......C...... TTCGACCTCCCCAGCGAGGGAACAAGCATCCGC 426662 28 92.9 0 .............C............C. | ========== ====== ====== ====== ============================ ================================== ================== 73 28 99.7 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : CCGAACTAACGCGGCTGATGGAACACGACTGGCTGCAGGGCATGCACGACCATGCAGACGTGCGGACCCTGGTCGCCGTGCCCCCTGAGGCAACCCAGCGCACCCTGCGCCGCGTGCAGGCCAAGAGCAGCCCCGAGCGCCTGCGGCGGCGCCAGATGCGCCGTCACCAGCTCACGGCAGAGCAGGCACTTGAACGGGTGCCTGACAGCGCCGCGGAAACATTGAAGCTGCCCTTTCTGACGCTGACCAGCACCAGCACCGGGCAACGGTTCAAGCTCTTTCTGCGGCTGGGCCCATCCACCGGCGCTGAGCAGGCCGGGGACTTCAACAGCTACGGCCTGAGCAGCACCGCCACCGTCCCCTGGTTCTGACCCTTTTTCTGGCGACCAACGCAAGTGCTTGATCTTCAAGCGCTTGCGTCGCAACTCGGCAGAATGGGTCGCTAGCCCGTTTCGGCCAAAATGCACGTTGCGACAAGCACTTACGCCCGACCGCGCGTA # Right flank : TTTTTGAAATTTCGTCGCGGAATGGTCCGCCGGCATACATCTCATAGCGCACGCTCCAAGCGCAATGCAAGCGATGATGTTCGCCCGTGGACACGCAGCGCAACACACCATGAGCACCTCCATGACCGGTGGCACCGCCCTGTTCGACACACCCGTCGGCGCCTGTGGCCTGGGCTGGGGCGATGACGGGCGGCTGCGGGGCTGCTGCCTGCCCGAAGCCGACCCGGCGCACACGGCACGCCGCCTGCGCCACCAGTTTCCGGAGCTGCCGTGGCACGACACGCTGCCGCCGGCCATGGCGGTGGTCGCCCGGCGCTGGCTGGCAGTGCTGACCGAAGGCAGCCGGGACACGCTGGCGGATGTGGCCTTGAACTTCGACGGGCATGCGCCGTTCCATGTCCAGGTGTGGCAGCTCGCCAGGCAGATTCCGCCGGGGCAGACGCGCAGCTACGGCGAGATGGCCAGGTTGCTGGATCAGCCGCCGGCCATGGCGCGTGCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //