Array 1 28941-27451 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJFY01000007.1 Klebsiella pneumoniae strain EuSCAPE_RO093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 28940 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 28879 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 28818 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 28757 29 100.0 32 ............................. TTATTTCTAAACTAAGTTTTGTTTCATGCAGT 28696 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 28635 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 28574 29 100.0 32 ............................. CTGACAGCTGGCGCTAACCCGTCGTTTATCGC 28513 29 100.0 32 ............................. CGTGAGCATCTGGGCATCTTCAGTGATAGCGT 28452 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 28391 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 28330 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 28269 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 28208 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 28147 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 28086 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 28025 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 27964 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 27903 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 27842 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 27781 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 27720 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 27659 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 27598 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 27537 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 27479 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 25 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //