Array 1 2556878-2554228 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP050360.1 Klebsiella pneumoniae strain 47733 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2556877 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 2556816 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 2556755 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 2556694 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 2556632 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 2556571 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 2556510 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 2556449 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 2556388 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 2556327 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 2556266 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 2556205 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 2556144 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 2556083 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 2556022 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 2555961 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 2555900 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 2555839 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 2555778 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 2555717 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 2555656 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 2555595 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 2555534 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 2555473 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 2555412 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 2555351 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 2555290 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 2555229 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 2555168 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 2555107 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 2555046 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 2554985 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 2554924 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 2554863 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 2554802 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 2554741 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 2554680 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 2554619 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 2554558 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 2554497 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 2554436 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 2554375 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 2554314 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 2554256 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //