Array 1 40477-40685 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEZ01000001.1 Gilliamella sp. Pra-s54 NODE_1_length_337534_cov_176.332634, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 40477 29 100.0 31 ............................. GATTGTTCATCATCAGAAACAATAGATTTTG 40537 29 96.6 31 G............................ TCTATCTGGAGTGTCGGCTGGCAGAATGCTT 40597 29 100.0 31 ............................. TTTCATACGCTATAAAACCAACATGTTGGCC 40657 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 4 29 99.2 31 ACCTTAACGCCGTATAGGTGGTTTAGAAA # Left flank : TGGTAAATCGTCTAACAAAGCATCGTGATAAGTGATCATCTTCTTTGTGGTAAGTGATAAAAGGAGATTATTGTAGTTTTATTATGTGTTATAGGCAATAAGGGATATTTTGATTAAAAAAACAAATAAAGGTTGATGATGATTTTTTCATTTAAAAAATCCAATAAAATCAATACCTTTCCTGACTGTTTTTTTATGTAAAAAACACATAAATTACAATCACACATTACAACCAAACAAAGGTATATTTAATTATAGATTTTATTTTTTGATTTCCTAAATTTAAAAAAATCGTATAAAAATCGGTCAGGAAAGGTATTGATTTTATTAAAGTTTTTTCTGTGCGTTTTTTTGAACACAAACCTCTCCAAACCCTTTTTTTTACGATAATTTAAAACTCAATAAAATCAAAATATTAGAAAACAGTTTAAAAAAAGGGTTTTCAAAGGCAAAATTGTTGTTTATCTTTATATAACAAGATTTATTAAATCTTGAGTTCT # Right flank : ACGGGCACATTTGGCAACAGCTATGGCCTCGTAGAGGGAGTATCAGGATGATACGAGTAGCGTAGCCGAAGGCTACATTCTGCAGCCTTGCGAGGGTTTTTAGGGGATTTTGCAAAAAATCCCCTAAATCGGACGAGATCACAACAGCTATTTTATCCACCCAAAGCCTAAACGTCCGAAACCATGGCACACAACCCATTTTATGCACTAACAAAAAAGAACTATTTTGATAAAAAAGCGGTCAGGAAAGTTACTGATTTTATTAAAGTTTTTTTGAAAATTATTTTAAGTAAAATCAGCTGTTTATATAAACTCGTATTAATCAATGGTTCAAATAAGAGATAATTTTTCCTCAAATTTTTCAAAATAGTACATCTATTTATTTCATATTTGAAGTTTTTAAAAGCGACATAAGTCGCTTTTAATCTTTGAATTAGTCAGTCCATTTTCCTGTATTAGTTGGTCTATTAAGACTAATCATTGCTTTGTGAGAATTTTGG # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACCTTAACGCCGTATAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 258-646 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEZ01000028.1 Gilliamella sp. Pra-s54 NODE_28_length_14141_cov_201.685544, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 258 28 100.0 32 ............................ CTGCCCCCAAAGTGCAAATACCGAATAATCGT 318 28 100.0 32 ............................ TGTTCGAACTGGATGCTTGAGGCGGTCTATTT 378 28 100.0 32 ............................ CGCATCATTTATGTTGAGACCAAAATTAAAAC 438 28 100.0 32 ............................ GTCTAAGGCTAATACAATATTATCAACGCTTC 498 28 100.0 32 ............................ TGATGACGCAATAGAAGTTAGCGCGGAACTTG 558 28 100.0 32 ............................ CTACAGTCTACTCAGATGATGAGGGCAAAACG 618 28 92.9 0 .....................A..A... | A [639] ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.0 32 CCTTAACGCCGTATAGGCGGTTTAGAAA # Left flank : TTAGGTCTTTTTTGTGAGTTGTTTTTGTATTAAAAAGCAATGCAAAAATCCCAAAAAAGTGGTCAGGAAAGGTATTGATTTTATTGAAGTTTTTTCTATCCGTTTTTTTGAATATAAACCTCTACAAACCCTTTTTTTTACGATAATTTAAAATTAAATAAAATCAATGCATTAGAAAACAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAACAAGGTTTATCAAATCTTGAGTTCTAC # Right flank : AATAAAATTAATCACATAATTAAAAAACAATCGGCTATGCTATCTGCCTTATTCCGGCGTCAGAATGCGCCGACAACAGAGTGAGGTTAGCACGCCAAACAGGACGTTTGGCGAGTTTGTGGCGCGCTTGACAAATTTGTCTGGAACAAATTTGAACACCTGAGCACAGCGAAGGTGGCCTCGCAGAGGCGAGTATCAGGATGATACGAGTAGTGCCGAAGGCCACATTCTGCAGCCAAAGCGTGGGTTGTCAGGGAATTCGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCCCCCAAAGTTCAAACGTCCGAAACCACCGCACCCAATTTATTCTATTCACAAAAACAAAAAAAGGCCTGATTTTCCACTAAAAAATCAGTCAGGAAAACTATTGATTTTATTTATGTTTTTTAAAAAAACTATACCTTATCCCCTTTCAGCAAGCGTCGCCTGCACAATCCTCAACGCATCAAACGTTTCTTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 64226-63958 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTEZ01000014.1 Gilliamella sp. Pra-s54 NODE_14_length_66259_cov_249.725058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 64225 29 96.6 31 ............................A ATATTTCGATTATTGGATTTTTGTACACTCA 64165 29 100.0 31 ............................. GTGCAGAGGGCTCAAGAACAAAATCATTTAC 64105 29 100.0 31 ............................. CGACTATCATTATATTTATCAGTCATCCGCT 64045 29 100.0 31 ............................. GTTGGATGGTTGTCGTGGACTGAAATAGCAC 63985 28 82.8 0 ..................T-..A.T...A | ========== ====== ====== ====== ============================= =============================== ================== 5 29 95.9 31 CCTTAACGCCGTATAGGCGGTTTAGAAAT # Left flank : AACAAAATAGCTACAGTGACAACGTCCGAGCAAAGGGAATTAAAGCGAATTCCCTTTGCAAACCCACGCTTTGGCTACAGAATGTGGCCTTCGGCTGCCCCGACGCCGACGCTCGGTCTTAACGCACCGTTTGTGGACGCGTTCCCGACGCACCACAAACTCGCCAAACATCCCTGTTTGGTGTGCTAACCTCGCTCTGTTGTCGGCACATTCCGACGCCGTAACAAGACAGACAGCATAACCTTAGGTATTTTTTTTGAGTTGTTTTTGTGTTAAAAAACACTGCAAAAACCCCAAAAAAGCGGTCAGGAAAGGTATTGATTTTATTGAAGTTTTTTCTGTCCGCTTTTTTGAATATAAACCTCTCCAAACCCTTTTTTTTATGATAATTTAAAATTCAATAAAATCAAAGTGTTATAAAGAAGCTTAAAAAAAGGGTTTTCAAAGCCAAAATTGTTGTTTATCTTTATATAACAAGATTTATCAAATCTTGAGTTCTA # Right flank : AGTAAAGTTAATCAAATAATTAAAAAACAATCGGCTATGCTATCTGTTTTATTCCGGCGTCAGAATGTGCCGACAACAGAGCGAGGTTAGCACGCCAAACAGGACGTTTGGCGAGTTTGTGGCGAGCTTGGAGCGCTTCCACAAACGGTGCGTTAAGACCGAGCGACGGCGGAGGACAAATTTGTCTGGAACAAATTTGAACATCTGAGCACAGCGAAGATGGCCTCGTAGAGGCGAGTATCAGGATGATACGAGTAATGCCGAAGGCCACATTCTGTAGCCAAAGCGTGGGTTGTCAGGGAATTCGCTTTAATTCCCTGACTCGGACGTGGGCACTGTAGCCATTTTGTTCCCCCAAAGTTCAAGCGTCCGAAACCACCGCACCTAACCCATTCTATCCACCAACAAAAAAAGCATCATTTTGATAAAAAATCGGCCAGAAAATGTATTGATTTTATTGAGGTTTTTATTTTTACTCCTAGACGATAAAACAACCAATT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTAACGCCGTATAGGCGGTTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //