Array 1 185831-186098 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBRA010000006.1 Enterobacter cloacae complex sp. I2 contig_0006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 185831 28 100.0 32 ............................ TCTGTAACGGTGTACCGGTAGAAGCGACCATC 185891 28 100.0 32 ............................ TTTTTTCACAGAGACGTCGATCGCGATTCTTT 185951 28 100.0 32 ............................ GCATCTTCGTTTACTGCACCTTGCGTCGCATC 186011 28 96.4 32 .........................T.. AGCATCGACGCAAACATAGTTAGAGTGTGGCT 186071 28 82.1 0 ...............A.....AC..CT. | ========== ====== ====== ====== ============================ ================================ ================== 5 28 95.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCTCCCACAAACGCAGCCTGTTTGCCGCTGTCTCGGAGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGATACTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAGGAGTGGCTGCTGGAAGATACAGAAACGAAATGTGACTATTGCCGGGCGTTAAACCACGTGCTGCTGGTATCGCATTTTAACCACGATACGCTGCCGCACCTGACGGGACTGCTGCATGACATTACTCATTCTATGGCCGCTGATGTCGTTGCGCCTCCACGTGCAGAATCGGTAATTCACATTATTTCCTGAGTGGAATCCGAGGCGTCGGGGGCAGGCCTCTAACGCCTCTGGCTTGACCCTTTTTTTGATGTTTACGTAACGTATTGATTTATATAAGGCGAACTTACGTGCCAGAAAAAAGGGTTTTATGCGCGAAAGTTGATTATTTTGTTTTCAAACAATAAGATGGCGTGGTTTTCTTTCA # Right flank : AAACTCAATCCGCTCAAACATTCACGCTATCTATTCAAAATTAAATACCATCATACCTCCCCCCCTTTTTTTTTTAAATTAAATAAAAAACCTATTCACACACCAATCATATTGCTAAATATATATTATCCACAAAAATAATAAATCAAAAGGAAAGGTCAGATTTCATCCGTCTATTACAGTAATTACTATTCATTTGATACCCGTCACATTTGTCCTCATCTTATGTTCGATAACATACCAGCACTCAACGCATTGAACTAAAAGCCCTTTATATGTCTGTAAACAGCATCACCCCCACGGATTTAAAAACTATTCTGCATTCAAAGCGCGCCAATATTTATTATCTTGAAAAATGCCGTATTCAGGTGAATGGTGGACGCGTTGAATACGTCACTCAGGAAGGTAAAGAATCGTTTTACTGGAATATTCCCATCGCCAATACGACAGCGGTGATGCTGGGCATGGGAACCTCCGTGACGCAAATGGCAATGCGGGAG # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 195584-196212 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBRA010000006.1 Enterobacter cloacae complex sp. I2 contig_0006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 195584 28 100.0 32 ............................ TGGCACCGAACCATTTAAGCGAACATGCACGG 195644 28 100.0 32 ............................ ACGACAAAAACCAAAAGCCCGCCAAAACGCCG 195704 28 100.0 33 ............................ ATTAAACCGCCGGATTTTAAATTCTGTGATTTT 195765 28 100.0 32 ............................ AAGACGGAGTGCCTTACCCACTGCCTGGTTTA 195825 28 96.4 32 .............T.............. GCTGCGGCCGTTGCGTGAGTAGCTCCACTGTG 195885 28 100.0 32 ............................ ATCAACGATATCCCACGCGAAGAAATGCTGAA 195945 28 100.0 32 ............................ TCAGCCAGCACGAAGCCAACCGCAGATGATAT 196005 28 100.0 32 ............................ GTCAATCACTTCACCACCGGCGCGGCGCTCGA 196065 28 96.4 32 .C.......................... TGCGCAGGCGTGGCCGATAATAAACGGGAACA 196125 28 100.0 32 ............................ CCAATGAGCAACATCGACAAACAGGCACTCCG 196185 28 75.0 0 ..T....A..C.....C...ACC..... | ========== ====== ====== ====== ============================ ================================= ================== 11 28 97.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AGCGTGCCACACGCTCGCTCTCGTCTGGCGTCAGCGTCCGGCCTGCGCTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACAGGTAATCCTTGATTGAGATACTCAATCAGCCGCATACCTCTGTTTGCCGGTAAACCAGCGTAGCGCCACAGTGTGTTATCAGCAGGTTTTTGTGCGGGGACCCATGTTCTCATGATACCTCCTGAGTAATGTCATTTGTCATAGGTAAGTATAGCCATTTGTCAGGTGTCAGGAAATGGGTATTTTTTGTGCTGAGTGGGTTATGAAAGAGTGGGTTTTGACCCTAATTTTCGATAAGAGGCTAATGTATTGATTTTAATATGAATTTTTAATTGGCGAGAAAAAAGGGTTAGAGAAGGACGTTTAGCTTTTTTTGTATGAAAATCATGATGGTGTGGAGCTATTATTCCA # Right flank : ACAACATCCAATCATTTGTTCAAATAATCGACTGACCTGACAAAAAAATAAGGCCGGGATTATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAATTTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAGACGACAGGATA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //